RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 ERBINQ96RT1 1412 aa39.87■■■■□ 3.97
PDCD4-205ENST00000467574 MROH1Q8NDA8 1641 aa39.87■■■■□ 3.97
PDCD4-205ENST00000467574 RRP7BPQ9NSQ0 103 aa39.86■■■■□ 3.97
PDCD4-205ENST00000467574 FAM135AQ9P2D6 1515 aa39.85■■■■□ 3.97
PDCD4-205ENST00000467574 PPP6R1Q9UPN7 881 aa39.81■■■■□ 3.96
PDCD4-205ENST00000467574 KDM5DQ9BY66 1539 aa39.8■■■■□ 3.96
PDCD4-205ENST00000467574 CEBPAP49715 358 aaPredicted RBP39.79■■■■□ 3.96
PDCD4-205ENST00000467574 ESF1Q9H501 851 aaKnown RBP39.79■■■■□ 3.96
PDCD4-205ENST00000467574 DEPDC5O75140 1603 aa39.79■■■■□ 3.96
PDCD4-205ENST00000467574 PLPPR3Q6T4P5 718 aa39.77■■■■□ 3.96
PDCD4-205ENST00000467574 ROCK1Q13464 1354 aa39.75■■■■□ 3.95
PDCD4-205ENST00000467574 PRDM15P57071 1507 aaPredicted RBP39.75■■■■□ 3.95
PDCD4-205ENST00000467574 ZC3H13Q5T200 1668 aaKnown RBP39.73■■■■□ 3.95
PDCD4-205ENST00000467574 ZMYM3Q14202 1370 aa39.73■■■■□ 3.95
PDCD4-205ENST00000467574 SETD1BQ9UPS6 1966 aaKnown RBP39.72■■■■□ 3.95
PDCD4-205ENST00000467574 ABCC3O15438 1527 aa39.7■■■■□ 3.95
PDCD4-205ENST00000467574 PREX1Q8TCU6 1659 aa39.7■■■■□ 3.95
PDCD4-205ENST00000467574 LMTK3Q96Q04 1460 aa39.7■■■■□ 3.95
PDCD4-205ENST00000467574 CEP152O94986 1710 aa39.69■■■■□ 3.94
PDCD4-205ENST00000467574 ITGAEP38570 1179 aa39.67■■■■□ 3.94
PDCD4-205ENST00000467574 ANKRD50Q9ULJ7 1429 aa39.65■■■■□ 3.94
PDCD4-205ENST00000467574 NPATQ14207 1427 aa39.63■■■■□ 3.93
PDCD4-205ENST00000467574 WASHC2CQ9Y4E1 1318 aa39.62■■■■□ 3.93
PDCD4-205ENST00000467574 VWDEQ8N2E2 1590 aa39.61■■■■□ 3.93
PDCD4-205ENST00000467574 CAMSAP1Q5T5Y3 1602 aa39.6■■■■□ 3.93
PDCD4-205ENST00000467574 PZPP20742 1482 aa39.59■■■■□ 3.93
PDCD4-205ENST00000467574 UNC13BO14795 1591 aa39.55■■■■□ 3.92
PDCD4-205ENST00000467574 GCC2Q8IWJ2 1684 aa39.52■■■■□ 3.92
PDCD4-205ENST00000467574 MYO3AQ8NEV4 1616 aa39.51■■■■□ 3.92
PDCD4-205ENST00000467574 LMTK2Q8IWU2 1503 aa39.5■■■■□ 3.91
PDCD4-205ENST00000467574 UHRF1BP1Q6BDS2 1440 aa39.5■■■■□ 3.91
PDCD4-205ENST00000467574 ZNF142P52746 1687 aaPredicted RBP39.46■■■■□ 3.91
PDCD4-205ENST00000467574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.46■■■■□ 3.911e-6■■□□□ 14.5
PDCD4-205ENST00000467574 KANK1Q14678 1352 aa39.45■■■■□ 3.91
PDCD4-205ENST00000467574 NAIPQ13075 1403 aa39.44■■■■□ 3.9
PDCD4-205ENST00000467574 SPATA31D1Q6ZQQ2 1576 aa39.42■■■■□ 3.9
PDCD4-205ENST00000467574 CFAP65Q6ZU64 1925 aaKnown RBP39.42■■■■□ 3.9
PDCD4-205ENST00000467574 ARHGAP31Q2M1Z3 1444 aa39.42■■■■□ 3.9
PDCD4-205ENST00000467574 FBXO31Q5XUX0 539 aaPredicted RBP39.42■■■■□ 3.9
PDCD4-205ENST00000467574 EFCAB6Q5THR3 1501 aa39.4■■■■□ 3.9
PDCD4-205ENST00000467574 HFM1A2PYH4 1435 aa39.4■■■■□ 3.9
PDCD4-205ENST00000467574 ERVK-7P63135 1459 aa39.38■■■■□ 3.9
PDCD4-205ENST00000467574 HSPA2P54652 639 aa39.38■■■■□ 3.89
PDCD4-205ENST00000467574 CEP170BQ9Y4F5 1589 aaPredicted RBP39.38■■■■□ 3.89
PDCD4-205ENST00000467574 IQGAP3Q86VI3 1631 aa39.37■■■■□ 3.89
PDCD4-205ENST00000467574 TNRQ92752 1358 aa39.36■■■■□ 3.89
PDCD4-205ENST00000467574 TET3O43151 1660 aa39.36■■■■□ 3.89
PDCD4-205ENST00000467574 A2ML1A8K2U0 1454 aa39.29■■■■□ 3.88
PDCD4-205ENST00000467574 STRCQ7RTU9 1775 aa39.26■■■■□ 3.88
PDCD4-205ENST00000467574 NLRP1Q9C000 1473 aa39.24■■■■□ 3.87
PDCD4-205ENST00000467574 E9PCH4 1651 aa39.22■■■■□ 3.87
PDCD4-205ENST00000467574 RPRD2Q5VT52 1461 aaKnown RBP39.22■■■■□ 3.87
PDCD4-205ENST00000467574 NUP155O75694 1391 aa39.21■■■■□ 3.87
PDCD4-205ENST00000467574 SYNMO15061 1565 aa39.2■■■■□ 3.87
PDCD4-205ENST00000467574 NOS1P29475 1434 aa39.18■■■■□ 3.86
PDCD4-205ENST00000467574 PLA2R1Q13018 1463 aa39.12■■■■□ 3.85
PDCD4-205ENST00000467574 UGGT1Q9NYU2 1555 aa39.12■■■■□ 3.85
PDCD4-205ENST00000467574 UBR1Q8IWV7 1749 aa39.11■■■■□ 3.85
PDCD4-205ENST00000467574 PIK3C2BO00750 1634 aa39.08■■■■□ 3.85
PDCD4-205ENST00000467574 KDM5AP29375 1690 aaKnown RBP39.03■■■■□ 3.84
PDCD4-205ENST00000467574 POLR1AO95602 1720 aaPredicted RBP39.02■■■■□ 3.84
PDCD4-205ENST00000467574 SETD5Q9C0A6 1442 aa38.99■■■■□ 3.83
PDCD4-205ENST00000467574 SPHKAPQ2M3C7 1700 aa38.99■■■■□ 3.83
PDCD4-205ENST00000467574 NEURL4Q96JN8 1562 aa38.95■■■■□ 3.83
PDCD4-205ENST00000467574 ADGRB3O60242 1522 aa38.94■■■■□ 3.82
PDCD4-205ENST00000467574 IDI1Q13907 227 aa38.94■■■■□ 3.82
PDCD4-205ENST00000467574 PTPRTO14522 1441 aa38.93■■■■□ 3.82
PDCD4-205ENST00000467574 THEMISQ8N1K5 641 aaPredicted RBP38.93■■■■□ 3.82
PDCD4-205ENST00000467574 NCKAP5LQ9HCH0 1330 aa38.91■■■■□ 3.82
PDCD4-205ENST00000467574 MYO5BQ9ULV0 1848 aa38.91■■■■□ 3.82
PDCD4-205ENST00000467574 TRIM52Q96A61 297 aa38.91■■■■□ 3.82
PDCD4-205ENST00000467574 SLC52A1Q9NWF4 448 aa38.9■■■■□ 3.82
PDCD4-205ENST00000467574 SLIT1O75093 1534 aa38.89■■■■□ 3.82
PDCD4-205ENST00000467574 ARHGAP23Q9P227 1491 aa38.89■■■■□ 3.82
PDCD4-205ENST00000467574 RAB3GAP2Q9H2M9 1393 aa38.88■■■■□ 3.81
PDCD4-205ENST00000467574 PKD2Q13563 968 aa38.88■■■■□ 3.81
PDCD4-205ENST00000467574 TMEM131LA2VDJ0 1609 aa38.86■■■■□ 3.81
PDCD4-205ENST00000467574 DMRT2Q9Y5R5 561 aa38.85■■■■□ 3.81
PDCD4-205ENST00000467574 TRPM2O94759 1503 aa38.84■■■■□ 3.81
PDCD4-205ENST00000467574 MED14O60244 1454 aa38.8■■■■□ 3.8
PDCD4-205ENST00000467574 SLC4A1APQ9BWU0 796 aaKnown RBP38.8■■■■□ 3.8
PDCD4-205ENST00000467574 CLTCL1P53675 1640 aa38.78■■■■□ 3.8
PDCD4-205ENST00000467574 TMEM2Q9UHN6 1383 aa38.78■■■■□ 3.8
PDCD4-205ENST00000467574 ANKLE2Q86XL3 938 aa38.77■■■■□ 3.8
PDCD4-205ENST00000467574 IQGAP1P46940 1657 aa38.76■■■■□ 3.8
PDCD4-205ENST00000467574 SCAF11Q99590 1463 aaKnown RBP38.76■■■■□ 3.8
PDCD4-205ENST00000467574 ACIN1Q9UKV3 1341 aaKnown RBP38.74■■■■□ 3.79
PDCD4-205ENST00000467574 STAG3Q9UJ98 1225 aa38.73■■■■□ 3.79
PDCD4-205ENST00000467574 NPHP4O75161 1426 aaPredicted RBP38.71■■■■□ 3.79
PDCD4-205ENST00000467574 MPHOSPH9Q99550 1183 aa38.7■■■■□ 3.79
PDCD4-205ENST00000467574 LTKP29376 864 aa38.69■■■■□ 3.78
PDCD4-205ENST00000467574 ZFYVE9O95405 1425 aa38.68■■■■□ 3.78
PDCD4-205ENST00000467574 HRCP23327 699 aa38.65■■■■□ 3.78
PDCD4-205ENST00000467574 KIF1BO60333 1816 aa38.65■■■■□ 3.78
PDCD4-205ENST00000467574 FOXD1Q16676 465 aa38.64■■■■□ 3.78
PDCD4-205ENST00000467574 TXNDC2Q86VQ3 553 aa38.63■■■■□ 3.77
PDCD4-205ENST00000467574 LTBP4Q8N2S1 1624 aa38.63■■■■□ 3.77
PDCD4-205ENST00000467574 RIMS2Q9UQ26 1411 aa38.6■■■■□ 3.77
PDCD4-205ENST00000467574 CHGAP10645 457 aaKnown RBP38.58■■■■□ 3.77
PDCD4-205ENST00000467574 EID1Q9Y6B2 187 aa38.58■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms