RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 RNF17Q9BXT8 1623 aaKnown RBP35.57■■■■□ 3.29
SUMO3-205ENST00000466861 ROCK1Q13464 1354 aa35.57■■■■□ 3.28
SUMO3-205ENST00000466861 CHIC2Q9UKJ5 165 aa35.57■■■■□ 3.28
SUMO3-205ENST00000466861 PTPRKQ15262 1439 aa35.54■■■■□ 3.28
SUMO3-205ENST00000466861 SETD1BQ9UPS6 1966 aaKnown RBP35.49■■■■□ 3.27
SUMO3-205ENST00000466861 C3P01024 1663 aa35.49■■■■□ 3.27
SUMO3-205ENST00000466861 CLTCQ00610 1675 aaKnown RBP35.48■■■■□ 3.27
SUMO3-205ENST00000466861 KDM5DQ9BY66 1539 aa35.47■■■■□ 3.27
SUMO3-205ENST00000466861 ZMYM3Q14202 1370 aa35.46■■■■□ 3.27
SUMO3-205ENST00000466861 ZC3H13Q5T200 1668 aaKnown RBP35.43■■■■□ 3.26
SUMO3-205ENST00000466861 DEPDC5O75140 1603 aa35.43■■■■□ 3.26
SUMO3-205ENST00000466861 MROH1Q8NDA8 1641 aa35.43■■■■□ 3.26
SUMO3-205ENST00000466861 ANKRD50Q9ULJ7 1429 aa35.42■■■■□ 3.26
SUMO3-205ENST00000466861 PRDM15P57071 1507 aaPredicted RBP35.41■■■■□ 3.26
SUMO3-205ENST00000466861 WASHC2CQ9Y4E1 1318 aa35.4■■■■□ 3.26
SUMO3-205ENST00000466861 NPATQ14207 1427 aa35.4■■■■□ 3.26
SUMO3-205ENST00000466861 CEBPAP49715 358 aaPredicted RBP35.39■■■■□ 3.26
SUMO3-205ENST00000466861 ITGAEP38570 1179 aa35.38■■■■□ 3.25
SUMO3-205ENST00000466861 ABCC3O15438 1527 aa35.35■■■■□ 3.25
SUMO3-205ENST00000466861 PLPPR3Q6T4P5 718 aa35.32■■■■□ 3.24
SUMO3-205ENST00000466861 KANK1Q14678 1352 aa35.32■■■■□ 3.24
SUMO3-205ENST00000466861 PREX1Q8TCU6 1659 aa35.32■■■■□ 3.24
SUMO3-205ENST00000466861 PZPP20742 1482 aa35.29■■■■□ 3.24
SUMO3-205ENST00000466861 VWDEQ8N2E2 1590 aa35.29■■■■□ 3.24
SUMO3-205ENST00000466861 LMTK3Q96Q04 1460 aa35.27■■■■□ 3.24
SUMO3-205ENST00000466861 LMTK2Q8IWU2 1503 aa35.26■■■■□ 3.23
SUMO3-205ENST00000466861 CEP152O94986 1710 aa35.25■■■■□ 3.23
SUMO3-205ENST00000466861 UHRF1BP1Q6BDS2 1440 aa35.23■■■■□ 3.23
SUMO3-205ENST00000466861 ARHGAP31Q2M1Z3 1444 aa35.23■■■■□ 3.23
SUMO3-205ENST00000466861 UNC13BO14795 1591 aa35.22■■■■□ 3.23
SUMO3-205ENST00000466861 CAMSAP1Q5T5Y3 1602 aa35.22■■■■□ 3.23
SUMO3-205ENST00000466861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.21■■■■□ 3.23
SUMO3-205ENST00000466861 GCC2Q8IWJ2 1684 aa35.21■■■■□ 3.23
SUMO3-205ENST00000466861 HFM1A2PYH4 1435 aa35.2■■■■□ 3.23
SUMO3-205ENST00000466861 NAIPQ13075 1403 aa35.19■■■■□ 3.22
SUMO3-205ENST00000466861 SPATA31D1Q6ZQQ2 1576 aa35.13■■■■□ 3.21
SUMO3-205ENST00000466861 TNRQ92752 1358 aa35.12■■■■□ 3.21
SUMO3-205ENST00000466861 MYO3AQ8NEV4 1616 aa35.1■■■■□ 3.21
SUMO3-205ENST00000466861 FBXO31Q5XUX0 539 aaPredicted RBP35.1■■■■□ 3.21
SUMO3-205ENST00000466861 ZNF142P52746 1687 aaPredicted RBP35.1■■■■□ 3.21
SUMO3-205ENST00000466861 IQGAP3Q86VI3 1631 aa35.09■■■■□ 3.21
SUMO3-205ENST00000466861 ERVK-7P63135 1459 aa35.09■■■■□ 3.21
SUMO3-205ENST00000466861 TET3O43151 1660 aa35.08■■■■□ 3.21
SUMO3-205ENST00000466861 EFCAB6Q5THR3 1501 aa35.08■■■■□ 3.21
SUMO3-205ENST00000466861 RPRD2Q5VT52 1461 aaKnown RBP35.07■■■■□ 3.2
SUMO3-205ENST00000466861 NLRP1Q9C000 1473 aa35.05■■■■□ 3.2
SUMO3-205ENST00000466861 CFAP65Q6ZU64 1925 aaKnown RBP35.04■■■■□ 3.2
SUMO3-205ENST00000466861 NUP155O75694 1391 aa35.03■■■■□ 3.2
SUMO3-205ENST00000466861 CEP170BQ9Y4F5 1589 aaPredicted RBP35.03■■■■□ 3.2
SUMO3-205ENST00000466861 A2ML1A8K2U0 1454 aa35.02■■■■□ 3.2
SUMO3-205ENST00000466861 ACIN1Q9UKV3 1341 aaKnown RBP35.01■■■■□ 3.19
SUMO3-205ENST00000466861 HSPA2P54652 639 aa34.99■■■■□ 3.19
SUMO3-205ENST00000466861 NOS1P29475 1434 aa34.95■■■■□ 3.19
SUMO3-205ENST00000466861 PLA2R1Q13018 1463 aa34.9■■■■□ 3.18
SUMO3-205ENST00000466861 E9PCH4 1651 aa34.89■■■■□ 3.18
SUMO3-205ENST00000466861 SETD5Q9C0A6 1442 aa34.88■■■■□ 3.17
SUMO3-205ENST00000466861 UGGT1Q9NYU2 1555 aa34.87■■■■□ 3.17
SUMO3-205ENST00000466861 THEMISQ8N1K5 641 aaPredicted RBP34.85■■■■□ 3.17
SUMO3-205ENST00000466861 STRCQ7RTU9 1775 aa34.85■■■■□ 3.17
SUMO3-205ENST00000466861 SYNMO15061 1565 aa34.84■■■■□ 3.17
SUMO3-205ENST00000466861 SLC52A1Q9NWF4 448 aa34.84■■■■□ 3.17
SUMO3-205ENST00000466861 KDM5AP29375 1690 aaKnown RBP34.83■■■■□ 3.17
SUMO3-205ENST00000466861 DMRT2Q9Y5R5 561 aa34.83■■■■□ 3.17
SUMO3-205ENST00000466861 TRIM52Q96A61 297 aa34.82■■■■□ 3.16
SUMO3-205ENST00000466861 PKD2Q13563 968 aa34.79■■■■□ 3.16
SUMO3-205ENST00000466861 UBR1Q8IWV7 1749 aa34.78■■■■□ 3.16
SUMO3-205ENST00000466861 HRCP23327 699 aa34.76■■■■□ 3.16
SUMO3-205ENST00000466861 IDI1Q13907 227 aa34.76■■■■□ 3.16
SUMO3-205ENST00000466861 PIK3C2BO00750 1634 aa34.75■■■■□ 3.15
SUMO3-205ENST00000466861 PTPRTO14522 1441 aa34.74■■■■□ 3.15
SUMO3-205ENST00000466861 SLC4A1APQ9BWU0 796 aaKnown RBP34.72■■■■□ 3.15
SUMO3-205ENST00000466861 SPHKAPQ2M3C7 1700 aa34.72■■■■□ 3.15
SUMO3-205ENST00000466861 RAB3GAP2Q9H2M9 1393 aa34.71■■■■□ 3.15
SUMO3-205ENST00000466861 POLR1AO95602 1720 aaPredicted RBP34.69■■■■□ 3.14
SUMO3-205ENST00000466861 ADGRB3O60242 1522 aa34.68■■■■□ 3.14
SUMO3-205ENST00000466861 ANKLE2Q86XL3 938 aa34.68■■■■□ 3.14
SUMO3-205ENST00000466861 SLIT1O75093 1534 aa34.67■■■■□ 3.14
SUMO3-205ENST00000466861 STAG3Q9UJ98 1225 aa34.67■■■■□ 3.14
SUMO3-205ENST00000466861 ARHGAP23Q9P227 1491 aa34.66■■■■□ 3.14
SUMO3-205ENST00000466861 NCKAP5LQ9HCH0 1330 aa34.64■■■■□ 3.14
SUMO3-205ENST00000466861 TRPM2O94759 1503 aa34.63■■■■□ 3.13
SUMO3-205ENST00000466861 MPHOSPH9Q99550 1183 aa34.62■■■■□ 3.13
SUMO3-205ENST00000466861 MED14O60244 1454 aa34.61■■■■□ 3.13
SUMO3-205ENST00000466861 TMEM2Q9UHN6 1383 aa34.61■■■■□ 3.13
SUMO3-205ENST00000466861 TMEM131LA2VDJ0 1609 aa34.6■■■■□ 3.13
SUMO3-205ENST00000466861 NEURL4Q96JN8 1562 aa34.58■■■■□ 3.13
SUMO3-205ENST00000466861 SCAF11Q99590 1463 aaKnown RBP34.55■■■■□ 3.12
SUMO3-205ENST00000466861 EID1Q9Y6B2 187 aa34.55■■■■□ 3.12
SUMO3-205ENST00000466861 MYO5BQ9ULV0 1848 aa34.53■■■■□ 3.12
SUMO3-205ENST00000466861 NPHP4O75161 1426 aaPredicted RBP34.51■■■■□ 3.12
SUMO3-205ENST00000466861 HDGFP51858 240 aaKnown RBP34.51■■■■□ 3.12
SUMO3-205ENST00000466861 TRIM26Q12899 539 aaPredicted RBP34.51■■■■□ 3.12
SUMO3-205ENST00000466861 TXNDC2Q86VQ3 553 aa34.51■■■■□ 3.12
SUMO3-205ENST00000466861 CLTCL1P53675 1640 aa34.49■■■■□ 3.11
SUMO3-205ENST00000466861 IQGAP1P46940 1657 aa34.48■■■■□ 3.11
SUMO3-205ENST00000466861 KIF1BO60333 1816 aa34.47■■■■□ 3.11
SUMO3-205ENST00000466861 LTKP29376 864 aa34.47■■■■□ 3.11
SUMO3-205ENST00000466861 ZFYVE9O95405 1425 aa34.46■■■■□ 3.11
SUMO3-205ENST00000466861 CHGAP10645 457 aaKnown RBP34.44■■■■□ 3.1
SUMO3-205ENST00000466861 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms