RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 NCOA1Q15788 1441 aa8.63□□□□□ -1.03
TRA2B-209ENST00000466832 TULP1O00294 542 aaPredicted RBP8.63□□□□□ -1.03
TRA2B-209ENST00000466832 STK25O00506 426 aa8.63□□□□□ -1.03
TRA2B-209ENST00000466832 ERICH6Q7L0X2 663 aa8.63□□□□□ -1.03
TRA2B-209ENST00000466832 GTF3C3Q9Y5Q9 886 aa8.63□□□□□ -1.03
TRA2B-209ENST00000466832 POTEAQ6S8J7 498 aa8.62□□□□□ -1.03
TRA2B-209ENST00000466832 RYDENQ9NUL5 291 aaKnown RBP8.62□□□□□ -1.03
TRA2B-209ENST00000466832 CCER1Q8TC90 406 aaPredicted RBP8.61□□□□□ -1.03
TRA2B-209ENST00000466832 PTPRKQ15262 1439 aa8.6□□□□□ -1.03
TRA2B-209ENST00000466832 FAM212AQ96EL1 285 aa8.6□□□□□ -1.03
TRA2B-209ENST00000466832 SGIP1Q9BQI5 828 aa8.6□□□□□ -1.03
TRA2B-209ENST00000466832 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRA2B-209ENST00000466832 ZNF335Q9H4Z2 1342 aaPredicted RBP8.6□□□□□ -1.03
TRA2B-209ENST00000466832 AKNAQ7Z591 1439 aa8.59□□□□□ -1.03
TRA2B-209ENST00000466832 CHRM1P11229 460 aaPredicted RBP8.59□□□□□ -1.03
TRA2B-209ENST00000466832 CASKIN1Q8WXD9 1431 aa8.59□□□□□ -1.03
TRA2B-209ENST00000466832 NEO1Q92859 1461 aa8.59□□□□□ -1.04
TRA2B-209ENST00000466832 FRMPD1Q5SYB0 1578 aa8.58□□□□□ -1.04
TRA2B-209ENST00000466832 LRRC9Q6ZRR7 1453 aa8.58□□□□□ -1.04
TRA2B-209ENST00000466832 ARHGEF12Q9NZN5 1544 aa8.57□□□□□ -1.04
TRA2B-209ENST00000466832 FMN1Q68DA7 1419 aa8.57□□□□□ -1.04
TRA2B-209ENST00000466832 TMEM132AQ24JP5 1023 aa8.57□□□□□ -1.04
TRA2B-209ENST00000466832 CPS1P31327 1500 aa8.57□□□□□ -1.04
TRA2B-209ENST00000466832 RAPGEF3O95398 923 aa8.56□□□□□ -1.04
TRA2B-209ENST00000466832 P3H3Q8IVL6 736 aa8.56□□□□□ -1.04
TRA2B-209ENST00000466832 CCNB3Q8WWL7 1395 aa8.55□□□□□ -1.04
TRA2B-209ENST00000466832 BCL11BQ9C0K0 894 aaPredicted RBP8.54□□□□□ -1.04
TRA2B-209ENST00000466832 STK24Q9Y6E0 443 aa8.54□□□□□ -1.04
TRA2B-209ENST00000466832 TTBK1Q5TCY1 1321 aaPredicted RBP8.54□□□□□ -1.04
TRA2B-209ENST00000466832 SPDYE1Q8NFV5 336 aaPredicted RBP8.53□□□□□ -1.04
TRA2B-209ENST00000466832 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.53□□□□□ -1.04
TRA2B-209ENST00000466832 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
TRA2B-209ENST00000466832 ZFP91Q96JP5 570 aaPredicted RBP8.53□□□□□ -1.04
TRA2B-209ENST00000466832 CCDC18Q5T9S5 1454 aa8.52□□□□□ -1.05
TRA2B-209ENST00000466832 EHBP1L1Q8N3D4 1523 aa8.51□□□□□ -1.05
TRA2B-209ENST00000466832 CREBZFQ9NS37 354 aa8.51□□□□□ -1.05
TRA2B-209ENST00000466832 HECW1Q76N89 1606 aa8.51□□□□□ -1.05
TRA2B-209ENST00000466832 MAGI2Q86UL8 1455 aa8.51□□□□□ -1.05
TRA2B-209ENST00000466832 MNX1P50219 401 aaPredicted RBP8.51□□□□□ -1.05
TRA2B-209ENST00000466832 KCNH8Q96L42 1107 aa8.51□□□□□ -1.05
TRA2B-209ENST00000466832 ZRANB1Q9UGI0 708 aa8.51□□□□□ -1.05
TRA2B-209ENST00000466832 CAMSAP1Q5T5Y3 1602 aa8.51□□□□□ -1.05
TRA2B-209ENST00000466832 UGGT2Q9NYU1 1516 aa8.51□□□□□ -1.05
TRA2B-209ENST00000466832 SUPT6HQ7KZ85 1726 aaKnown RBP8.5□□□□□ -1.05
TRA2B-209ENST00000466832 ZMYM4Q5VZL5 1548 aa8.5□□□□□ -1.05
TRA2B-209ENST00000466832 IQGAP2Q13576 1575 aa8.5□□□□□ -1.05
TRA2B-209ENST00000466832 LRRIQ1Q96JM4 1722 aa8.5□□□□□ -1.05
TRA2B-209ENST00000466832 ARXQ96QS3 562 aa8.5□□□□□ -1.05
TRA2B-209ENST00000466832 DHX57Q6P158 1386 aaKnown RBP8.49□□□□□ -1.05
TRA2B-209ENST00000466832 ZFYVE16Q7Z3T8 1539 aa8.49□□□□□ -1.05
TRA2B-209ENST00000466832 RICTORQ6R327 1708 aa8.49□□□□□ -1.05
TRA2B-209ENST00000466832 FHOD3Q2V2M9 1422 aa8.49□□□□□ -1.05
TRA2B-209ENST00000466832 TRAPPC8Q9Y2L5 1435 aa8.49□□□□□ -1.05
TRA2B-209ENST00000466832 CEBPAP49715 358 aaPredicted RBP8.49□□□□□ -1.05
TRA2B-209ENST00000466832 PLA2R1Q13018 1463 aa8.49□□□□□ -1.05
TRA2B-209ENST00000466832 SIGLEC1Q9BZZ2 1709 aa8.48□□□□□ -1.05
TRA2B-209ENST00000466832 ABCA9Q8IUA7 1624 aa8.48□□□□□ -1.05
TRA2B-209ENST00000466832 RASEFQ8IZ41 740 aa8.48□□□□□ -1.05
TRA2B-209ENST00000466832 MLECQ14165 292 aa8.48□□□□□ -1.05
TRA2B-209ENST00000466832 KANK4Q5T7N3 995 aaPredicted RBP8.48□□□□□ -1.05
TRA2B-209ENST00000466832 ALKQ9UM73 1620 aa8.47□□□□□ -1.05
TRA2B-209ENST00000466832 DENND4BO75064 1496 aaPredicted RBP8.47□□□□□ -1.05
TRA2B-209ENST00000466832 DAXXQ9UER7 740 aaPredicted RBP8.46□□□□□ -1.06
TRA2B-209ENST00000466832 PRR29P0C7W0 189 aa8.45□□□□□ -1.06
TRA2B-209ENST00000466832 ACIN1Q9UKV3 1341 aaKnown RBP8.45□□□□□ -1.06
TRA2B-209ENST00000466832 CDK12Q9NYV4 1490 aaPredicted RBP8.45□□□□□ -1.06
TRA2B-209ENST00000466832 ZNF316A6NFI3 1004 aaPredicted RBP8.45□□□□□ -1.06
TRA2B-209ENST00000466832 TCOF1Q13428 1488 aaKnown RBP8.44□□□□□ -1.06
TRA2B-209ENST00000466832 C3P01024 1663 aa8.44□□□□□ -1.06
TRA2B-209ENST00000466832 LRP5O75197 1615 aa8.44□□□□□ -1.06
TRA2B-209ENST00000466832 SETD5Q9C0A6 1442 aa8.44□□□□□ -1.06
TRA2B-209ENST00000466832 AKT1S1Q96B36 256 aa8.44□□□□□ -1.06
TRA2B-209ENST00000466832 WDR70Q9NW82 654 aa8.44□□□□□ -1.06
TRA2B-209ENST00000466832 PCDH10Q9P2E7 1040 aa8.44□□□□□ -1.06
TRA2B-209ENST00000466832 GCC2Q8IWJ2 1684 aa8.44□□□□□ -1.06
TRA2B-209ENST00000466832 NCKAP5LQ9HCH0 1330 aa8.43□□□□□ -1.06
TRA2B-209ENST00000466832 LMOD2Q6P5Q4 547 aa8.43□□□□□ -1.06
TRA2B-209ENST00000466832 KCNV2Q8TDN2 545 aa8.43□□□□□ -1.06
TRA2B-209ENST00000466832 PYGBP11216 843 aa8.43□□□□□ -1.06
TRA2B-209ENST00000466832 SHANK2Q9UPX8 1470 aa8.43□□□□□ -1.06
TRA2B-209ENST00000466832 FGD6Q6ZV73 1430 aa8.43□□□□□ -1.06
TRA2B-209ENST00000466832 SETBP1Q9Y6X0 1596 aa8.42□□□□□ -1.06
TRA2B-209ENST00000466832 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.42□□□□□ -1.06
TRA2B-209ENST00000466832 CFAP74Q9C0B2 1584 aa8.42□□□□□ -1.06
TRA2B-209ENST00000466832 DISP1Q96F81 1524 aa8.42□□□□□ -1.06
TRA2B-209ENST00000466832 CLEC11AQ9Y240 323 aa8.42□□□□□ -1.06
TRA2B-209ENST00000466832 LRRC7Q96NW7 1537 aa8.41□□□□□ -1.06
TRA2B-209ENST00000466832 RNF17Q9BXT8 1623 aaKnown RBP8.41□□□□□ -1.06
TRA2B-209ENST00000466832 RBM42Q9BTD8 480 aaKnown RBP8.41□□□□□ -1.06
TRA2B-209ENST00000466832 MYOM3Q5VTT5 1437 aa8.41□□□□□ -1.06
TRA2B-209ENST00000466832 C9orf84Q5VXU9 1444 aa8.41□□□□□ -1.06
TRA2B-209ENST00000466832 PTPN23Q9H3S7 1636 aa8.4□□□□□ -1.06
TRA2B-209ENST00000466832 DIEXFQ68CQ4 756 aaKnown RBP8.4□□□□□ -1.06
TRA2B-209ENST00000466832 ZNF772Q68DY9 489 aaPredicted RBP8.4□□□□□ -1.06
TRA2B-209ENST00000466832 ATP10AO60312 1499 aa8.4□□□□□ -1.06
TRA2B-209ENST00000466832 NPATQ14207 1427 aa8.4□□□□□ -1.07
TRA2B-209ENST00000466832 MIA2Q96PC5 1412 aa8.4□□□□□ -1.07
TRA2B-209ENST00000466832 SLC34A2O95436 690 aa8.4□□□□□ -1.07
TRA2B-209ENST00000466832 C14orf37Q86TY3 774 aa8.4□□□□□ -1.07
TRA2B-209ENST00000466832 YY1P25490 414 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms