RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 UHRF1BP1Q6BDS2 1440 aa15.68■□□□□ 0.1
CD40-204ENST00000466205 ITGAEP38570 1179 aa15.68■□□□□ 0.1
CD40-204ENST00000466205 DUOX2Q9NRD8 1548 aa15.68■□□□□ 0.1
CD40-204ENST00000466205 WASHC2CQ9Y4E1 1318 aa15.68■□□□□ 0.1
CD40-204ENST00000466205 KDM5DQ9BY66 1539 aa15.67■□□□□ 0.1
CD40-204ENST00000466205 EIF2AK4Q9P2K8 1649 aaKnown RBP15.65■□□□□ 0.1
CD40-204ENST00000466205 ANKRD30AQ9BXX3 1397 aa15.64■□□□□ 0.09
CD40-204ENST00000466205 PTPRKQ15262 1439 aa15.64■□□□□ 0.09
CD40-204ENST00000466205 FBXO31Q5XUX0 539 aaPredicted RBP15.64■□□□□ 0.09
CD40-204ENST00000466205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.64■□□□□ 0.09
CD40-204ENST00000466205 PPP6R1Q9UPN7 881 aa15.64■□□□□ 0.09
CD40-204ENST00000466205 RNF17Q9BXT8 1623 aaKnown RBP15.64■□□□□ 0.09
CD40-204ENST00000466205 ERBINQ96RT1 1412 aa15.62■□□□□ 0.09
CD40-204ENST00000466205 MROH1Q8NDA8 1641 aa15.62■□□□□ 0.09
CD40-204ENST00000466205 NPATQ14207 1427 aa15.61■□□□□ 0.09
CD40-204ENST00000466205 NCOA1Q15788 1441 aa15.61■□□□□ 0.09
CD40-204ENST00000466205 CEP152O94986 1710 aa15.61■□□□□ 0.09
CD40-204ENST00000466205 ABCC3O15438 1527 aa15.61■□□□□ 0.09
CD40-204ENST00000466205 MYO3AQ8NEV4 1616 aa15.61■□□□□ 0.09
CD40-204ENST00000466205 ADGRL2O95490 1459 aa15.59■□□□□ 0.09
CD40-204ENST00000466205 PZPP20742 1482 aa15.58■□□□□ 0.08
CD40-204ENST00000466205 ZC3H13Q5T200 1668 aaKnown RBP15.57■□□□□ 0.08
CD40-204ENST00000466205 PRDM15P57071 1507 aaPredicted RBP15.57■□□□□ 0.08
CD40-204ENST00000466205 FAM135AQ9P2D6 1515 aa15.57■□□□□ 0.08
CD40-204ENST00000466205 TNRQ92752 1358 aa15.56■□□□□ 0.08
CD40-204ENST00000466205 CEP170BQ9Y4F5 1589 aaPredicted RBP15.56■□□□□ 0.08
CD40-204ENST00000466205 CAMSAP1Q5T5Y3 1602 aa15.56■□□□□ 0.08
CD40-204ENST00000466205 SETD1BQ9UPS6 1966 aaKnown RBP15.56■□□□□ 0.08
CD40-204ENST00000466205 STRCQ7RTU9 1775 aa15.54■□□□□ 0.08
CD40-204ENST00000466205 DEPDC5O75140 1603 aa15.54■□□□□ 0.08
CD40-204ENST00000466205 ANKRD50Q9ULJ7 1429 aa15.54■□□□□ 0.08
CD40-204ENST00000466205 KANK1Q14678 1352 aa15.53■□□□□ 0.08
CD40-204ENST00000466205 ZNF142P52746 1687 aaPredicted RBP15.53■□□□□ 0.08
CD40-204ENST00000466205 RRBP1Q9P2E9 1410 aaKnown RBP15.52■□□□□ 0.08
CD40-204ENST00000466205 NCKAP5LQ9HCH0 1330 aa15.52■□□□□ 0.08
CD40-204ENST00000466205 A2ML1A8K2U0 1454 aa15.51■□□□□ 0.07
CD40-204ENST00000466205 ERVK-7P63135 1459 aa15.51■□□□□ 0.07
CD40-204ENST00000466205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.5■□□□□ 0.07
CD40-204ENST00000466205 CFAP65Q6ZU64 1925 aaKnown RBP15.5■□□□□ 0.07
CD40-204ENST00000466205 ROCK1Q13464 1354 aa15.49■□□□□ 0.07
CD40-204ENST00000466205 SPATA31D1Q6ZQQ2 1576 aa15.49■□□□□ 0.07
CD40-204ENST00000466205 VWDEQ8N2E2 1590 aa15.47■□□□□ 0.07
CD40-204ENST00000466205 UGGT1Q9NYU2 1555 aa15.46■□□□□ 0.07
CD40-204ENST00000466205 NLRP1Q9C000 1473 aa15.46■□□□□ 0.06
CD40-204ENST00000466205 LMTK2Q8IWU2 1503 aa15.45■□□□□ 0.06
CD40-204ENST00000466205 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
CD40-204ENST00000466205 UNC13BO14795 1591 aa15.45■□□□□ 0.06
CD40-204ENST00000466205 ARHGAP31Q2M1Z3 1444 aa15.44■□□□□ 0.06
CD40-204ENST00000466205 EFCAB6Q5THR3 1501 aa15.44■□□□□ 0.06
CD40-204ENST00000466205 PLA2R1Q13018 1463 aa15.44■□□□□ 0.06
CD40-204ENST00000466205 PTPRTO14522 1441 aa15.43■□□□□ 0.06
CD40-204ENST00000466205 NUP155O75694 1391 aa15.41■□□□□ 0.06
CD40-204ENST00000466205 THEMISQ8N1K5 641 aaPredicted RBP15.41■□□□□ 0.06
CD40-204ENST00000466205 PKD2Q13563 968 aa15.4■□□□□ 0.06
CD40-204ENST00000466205 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
CD40-204ENST00000466205 SYNMO15061 1565 aa15.4■□□□□ 0.06
CD40-204ENST00000466205 PIK3C2BO00750 1634 aa15.39■□□□□ 0.05
CD40-204ENST00000466205 TET3O43151 1660 aa15.39■□□□□ 0.05
CD40-204ENST00000466205 POLR1AO95602 1720 aaPredicted RBP15.39■□□□□ 0.05
CD40-204ENST00000466205 UBR1Q8IWV7 1749 aa15.39■□□□□ 0.05
CD40-204ENST00000466205 NEURL4Q96JN8 1562 aa15.38■□□□□ 0.05
CD40-204ENST00000466205 NAIPQ13075 1403 aa15.38■□□□□ 0.05
CD40-204ENST00000466205 ANKLE2Q86XL3 938 aa15.38■□□□□ 0.05
CD40-204ENST00000466205 CERKQ8TCT0 537 aa15.38■□□□□ 0.05
CD40-204ENST00000466205 IQGAP3Q86VI3 1631 aa15.38■□□□□ 0.05
CD40-204ENST00000466205 ZNF335Q9H4Z2 1342 aaPredicted RBP15.38■□□□□ 0.05
CD40-204ENST00000466205 GCC2Q8IWJ2 1684 aa15.38■□□□□ 0.05
CD40-204ENST00000466205 IDI1Q13907 227 aa15.37■□□□□ 0.05
CD40-204ENST00000466205 E9PCH4 1651 aa15.37■□□□□ 0.05
CD40-204ENST00000466205 NOS1P29475 1434 aa15.36■□□□□ 0.05
CD40-204ENST00000466205 FBXO41Q8TF61 875 aa15.35■□□□□ 0.05
CD40-204ENST00000466205 TRIM52Q96A61 297 aa15.35■□□□□ 0.05
CD40-204ENST00000466205 SENP3Q9H4L4 574 aaPredicted RBP15.35■□□□□ 0.05
CD40-204ENST00000466205 CHGAP10645 457 aaKnown RBP15.34■□□□□ 0.05
CD40-204ENST00000466205 HFM1A2PYH4 1435 aa15.34■□□□□ 0.05
CD40-204ENST00000466205 NPHP4O75161 1426 aaPredicted RBP15.34■□□□□ 0.05
CD40-204ENST00000466205 RPRD2Q5VT52 1461 aaKnown RBP15.33■□□□□ 0.05
CD40-204ENST00000466205 LTBP4Q8N2S1 1624 aa15.32■□□□□ 0.04
CD40-204ENST00000466205 LTKP29376 864 aa15.32■□□□□ 0.04
CD40-204ENST00000466205 TXNDC2Q86VQ3 553 aa15.32■□□□□ 0.04
CD40-204ENST00000466205 ADGRB3O60242 1522 aa15.31■□□□□ 0.04
CD40-204ENST00000466205 IQGAP1P46940 1657 aa15.3■□□□□ 0.04
CD40-204ENST00000466205 SCAF11Q99590 1463 aaKnown RBP15.3■□□□□ 0.04
CD40-204ENST00000466205 SLIT1O75093 1534 aa15.29■□□□□ 0.04
CD40-204ENST00000466205 ARHGAP23Q9P227 1491 aa15.29■□□□□ 0.04
CD40-204ENST00000466205 TMEM2Q9UHN6 1383 aa15.29■□□□□ 0.04
CD40-204ENST00000466205 SLC52A1Q9NWF4 448 aa15.29■□□□□ 0.04
CD40-204ENST00000466205 EID1Q9Y6B2 187 aa15.29■□□□□ 0.04
CD40-204ENST00000466205 MED14O60244 1454 aa15.28■□□□□ 0.04
CD40-204ENST00000466205 NUTM2DQ5VT03 806 aaPredicted RBP15.27■□□□□ 0.04
CD40-204ENST00000466205 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.03
CD40-204ENST00000466205 BCANQ96GW7 911 aa15.26■□□□□ 0.03
CD40-204ENST00000466205 SLC4A1APQ9BWU0 796 aaKnown RBP15.25■□□□□ 0.03
CD40-204ENST00000466205 SPHKAPQ2M3C7 1700 aa15.25■□□□□ 0.03
CD40-204ENST00000466205 KDM5AP29375 1690 aaKnown RBP15.25■□□□□ 0.03
CD40-204ENST00000466205 TMEM131LA2VDJ0 1609 aa15.25■□□□□ 0.03
CD40-204ENST00000466205 FOXD1Q16676 465 aa15.24■□□□□ 0.03
CD40-204ENST00000466205 PPP1R15AO75807 674 aaPredicted RBP15.23■□□□□ 0.03
CD40-204ENST00000466205 SLC26A8Q96RN1 970 aa15.23■□□□□ 0.03
CD40-204ENST00000466205 RIMS2Q9UQ26 1411 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms