RNA–Protein interactions for RNA: ENST00000466183.1

SNRNP25-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 2

Gene SNRNP25, Length 1,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-205ENST00000466183 SPATA31D1Q6ZQQ2 1576 aa13.38□□□□□ -0.27
SNRNP25-205ENST00000466183 MBD5Q9P267 1494 aa13.38□□□□□ -0.27
SNRNP25-205ENST00000466183 DISP3Q9P2K9 1392 aa13.37□□□□□ -0.27
SNRNP25-205ENST00000466183 PLA2R1Q13018 1463 aa13.36□□□□□ -0.27
SNRNP25-205ENST00000466183 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
SNRNP25-205ENST00000466183 GGT6Q6P531 493 aa13.36□□□□□ -0.27
SNRNP25-205ENST00000466183 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
SNRNP25-205ENST00000466183 NCKAP5LQ9HCH0 1330 aa13.36□□□□□ -0.27
SNRNP25-205ENST00000466183 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
SNRNP25-205ENST00000466183 CAMSAP2Q08AD1 1489 aa13.35□□□□□ -0.27
SNRNP25-205ENST00000466183 NCOA2Q15596 1464 aa13.34□□□□□ -0.27
SNRNP25-205ENST00000466183 ZNF335Q9H4Z2 1342 aaPredicted RBP13.34□□□□□ -0.27
SNRNP25-205ENST00000466183 ILDR2Q71H61 639 aa13.33□□□□□ -0.28
SNRNP25-205ENST00000466183 CCDC141Q6ZP82 1450 aa13.33□□□□□ -0.28
SNRNP25-205ENST00000466183 DNMT1P26358 1616 aaKnown RBP13.32□□□□□ -0.28
SNRNP25-205ENST00000466183 RTEL1-TNFRSF6BF6WH68 1400 aa13.32□□□□□ -0.28
SNRNP25-205ENST00000466183 A2ML1A8K2U0 1454 aa13.31□□□□□ -0.28
SNRNP25-205ENST00000466183 POLR1AO95602 1720 aaPredicted RBP13.31□□□□□ -0.28
SNRNP25-205ENST00000466183 KDM5DQ9BY66 1539 aa13.31□□□□□ -0.28
SNRNP25-205ENST00000466183 NEURL4Q96JN8 1562 aa13.3□□□□□ -0.28
SNRNP25-205ENST00000466183 DHX29Q7Z478 1369 aaKnown RBP13.3□□□□□ -0.28
SNRNP25-205ENST00000466183 PKD2Q13563 968 aa13.29□□□□□ -0.28
SNRNP25-205ENST00000466183 PZPP20742 1482 aa13.29□□□□□ -0.28
SNRNP25-205ENST00000466183 FAM135AQ9P2D6 1515 aa13.28□□□□□ -0.28
SNRNP25-205ENST00000466183 ARHGEF5Q12774 1597 aa13.28□□□□□ -0.28
SNRNP25-205ENST00000466183 KIF3BO15066 747 aa13.27□□□□□ -0.29
SNRNP25-205ENST00000466183 TNRQ92752 1358 aa13.27□□□□□ -0.29
SNRNP25-205ENST00000466183 FBXO31Q5XUX0 539 aaPredicted RBP13.26□□□□□ -0.29
SNRNP25-205ENST00000466183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.292e-12■■■■■ 39
SNRNP25-205ENST00000466183 LOC105371045A0A1W2PR82 267 aa13.25□□□□□ -0.29
SNRNP25-205ENST00000466183 UBAP1LF5GYI3 381 aa13.25□□□□□ -0.29
SNRNP25-205ENST00000466183 RNF17Q9BXT8 1623 aaKnown RBP13.24□□□□□ -0.29
SNRNP25-205ENST00000466183 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
SNRNP25-205ENST00000466183 SOCS7O14512 581 aa13.22□□□□□ -0.29
SNRNP25-205ENST00000466183 MAST1Q9Y2H9 1570 aa13.22□□□□□ -0.29
SNRNP25-205ENST00000466183 ABCC3O15438 1527 aa13.22□□□□□ -0.29
SNRNP25-205ENST00000466183 VPS8Q8N3P4 1428 aa13.22□□□□□ -0.29
SNRNP25-205ENST00000466183 ZC3H13Q5T200 1668 aaKnown RBP13.21□□□□□ -0.29
SNRNP25-205ENST00000466183 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
SNRNP25-205ENST00000466183 VWDEQ8N2E2 1590 aa13.21□□□□□ -0.29
SNRNP25-205ENST00000466183 UGGT1Q9NYU2 1555 aa13.21□□□□□ -0.29
SNRNP25-205ENST00000466183 CPS1P31327 1500 aa13.21□□□□□ -0.29
SNRNP25-205ENST00000466183 MROH1Q8NDA8 1641 aa13.21□□□□□ -0.3
SNRNP25-205ENST00000466183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNRNP25-205ENST00000466183 CEP152O94986 1710 aa13.2□□□□□ -0.3
SNRNP25-205ENST00000466183 NLRP1Q9C000 1473 aa13.2□□□□□ -0.3
SNRNP25-205ENST00000466183 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
SNRNP25-205ENST00000466183 EIF2AK4Q9P2K8 1649 aaKnown RBP13.2□□□□□ -0.3
SNRNP25-205ENST00000466183 SHANK2Q9UPX8 1470 aa13.19□□□□□ -0.3
SNRNP25-205ENST00000466183 DEPDC5O75140 1603 aa13.19□□□□□ -0.3
SNRNP25-205ENST00000466183 IQGAP1P46940 1657 aa13.18□□□□□ -0.3
SNRNP25-205ENST00000466183 RSPH4AQ5TD94 716 aa13.18□□□□□ -0.3
SNRNP25-205ENST00000466183 ERVK-7P63135 1459 aa13.17□□□□□ -0.3
SNRNP25-205ENST00000466183 NPHP4O75161 1426 aaPredicted RBP13.17□□□□□ -0.3
SNRNP25-205ENST00000466183 MYOM3Q5VTT5 1437 aa13.16□□□□□ -0.3
SNRNP25-205ENST00000466183 TSPY4P0CV99 314 aa13.16□□□□□ -0.3
SNRNP25-205ENST00000466183 TSPY10P0CW01 314 aa13.16□□□□□ -0.3
SNRNP25-205ENST00000466183 STRCP1A6NGW2 1772 aa13.16□□□□□ -0.3
SNRNP25-205ENST00000466183 ALKQ9UM73 1620 aa13.16□□□□□ -0.3
SNRNP25-205ENST00000466183 MED14O60244 1454 aa13.16□□□□□ -0.3
SNRNP25-205ENST00000466183 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
SNRNP25-205ENST00000466183 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.3
SNRNP25-205ENST00000466183 PIP4K2BP78356 416 aa13.15□□□□□ -0.3
SNRNP25-205ENST00000466183 KANK4Q5T7N3 995 aaPredicted RBP13.15□□□□□ -0.3
SNRNP25-205ENST00000466183 UBR1Q8IWV7 1749 aa13.14□□□□□ -0.31
SNRNP25-205ENST00000466183 HSPA1LP34931 641 aa13.14□□□□□ -0.31
SNRNP25-205ENST00000466183 ANKLE2Q86XL3 938 aa13.14□□□□□ -0.31
SNRNP25-205ENST00000466183 MAP3K1Q13233 1512 aa13.13□□□□□ -0.31
SNRNP25-205ENST00000466183 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
SNRNP25-205ENST00000466183 THEMISQ8N1K5 641 aaPredicted RBP13.13□□□□□ -0.31
SNRNP25-205ENST00000466183 PRDM15P57071 1507 aaPredicted RBP13.13□□□□□ -0.31
SNRNP25-205ENST00000466183 DUOX2Q9NRD8 1548 aa13.13□□□□□ -0.31
SNRNP25-205ENST00000466183 SYNMO15061 1565 aa13.12□□□□□ -0.31
SNRNP25-205ENST00000466183 KCNA4P22459 653 aa13.12□□□□□ -0.31
SNRNP25-205ENST00000466183 PTPN23Q9H3S7 1636 aa13.1□□□□□ -0.31
SNRNP25-205ENST00000466183 KIF15Q9NS87 1388 aa13.09□□□□□ -0.31
SNRNP25-205ENST00000466183 LRRC7Q96NW7 1537 aa13.09□□□□□ -0.31
SNRNP25-205ENST00000466183 TOM1O60784 492 aa13.09□□□□□ -0.31
SNRNP25-205ENST00000466183 SCAF11Q99590 1463 aaKnown RBP13.09□□□□□ -0.31
SNRNP25-205ENST00000466183 ABCC5O15440 1437 aa13.08□□□□□ -0.32
SNRNP25-205ENST00000466183 ERBINQ96RT1 1412 aa13.07□□□□□ -0.32
SNRNP25-205ENST00000466183 PIK3C2BO00750 1634 aa13.07□□□□□ -0.32
SNRNP25-205ENST00000466183 ARHGAP23Q9P227 1491 aa13.06□□□□□ -0.32
SNRNP25-205ENST00000466183 SLIT1O75093 1534 aa13.06□□□□□ -0.32
SNRNP25-205ENST00000466183 DAPK1P53355 1430 aa13.05□□□□□ -0.32
SNRNP25-205ENST00000466183 XIRP1Q702N8 1843 aaKnown RBP13.05□□□□□ -0.32
SNRNP25-205ENST00000466183 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
SNRNP25-205ENST00000466183 FGD6Q6ZV73 1430 aa13.04□□□□□ -0.32
SNRNP25-205ENST00000466183 RRP7BPQ9NSQ0 103 aa13.03□□□□□ -0.32
SNRNP25-205ENST00000466183 LTKP29376 864 aa13.02□□□□□ -0.33
SNRNP25-205ENST00000466183 EFCAB6Q5THR3 1501 aa13□□□□□ -0.33
SNRNP25-205ENST00000466183 LMTK2Q8IWU2 1503 aa13□□□□□ -0.33
SNRNP25-205ENST00000466183 KDM5AP29375 1690 aaKnown RBP12.99□□□□□ -0.33
SNRNP25-205ENST00000466183 KANK1Q14678 1352 aa12.99□□□□□ -0.33
SNRNP25-205ENST00000466183 TMEM2Q9UHN6 1383 aa12.99□□□□□ -0.33
SNRNP25-205ENST00000466183 TXNDC2Q86VQ3 553 aa12.99□□□□□ -0.33
SNRNP25-205ENST00000466183 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
SNRNP25-205ENST00000466183 ADGRB3O60242 1522 aa12.98□□□□□ -0.33
SNRNP25-205ENST00000466183 ANKRD30AQ9BXX3 1397 aa12.97□□□□□ -0.33
SNRNP25-205ENST00000466183 CHIC2Q9UKJ5 165 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms