RNA–Protein interactions for RNA: ENST00000466030.1

RAPGEF4-207, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 493 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-207ENST00000466030 PTPRMP28827 1452 aa12.19□□□□□ -0.46
RAPGEF4-207ENST00000466030 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
RAPGEF4-207ENST00000466030 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
RAPGEF4-207ENST00000466030 ZNF518AQ6AHZ1 1483 aa12.18□□□□□ -0.46
RAPGEF4-207ENST00000466030 ABCA6Q8N139 1617 aa12.18□□□□□ -0.46
RAPGEF4-207ENST00000466030 KIDINS220Q9ULH0 1771 aa12.18□□□□□ -0.46
RAPGEF4-207ENST00000466030 TIAM1Q13009 1591 aa12.18□□□□□ -0.46
RAPGEF4-207ENST00000466030 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
RAPGEF4-207ENST00000466030 ATP10AO60312 1499 aa12.17□□□□□ -0.46
RAPGEF4-207ENST00000466030 EHBP1L1Q8N3D4 1523 aa12.16□□□□□ -0.46
RAPGEF4-207ENST00000466030 SYCP2Q9BX26 1530 aa12.16□□□□□ -0.46
RAPGEF4-207ENST00000466030 PITPNM1O00562 1244 aa12.16□□□□□ -0.46
RAPGEF4-207ENST00000466030 SPRYD3Q8NCJ5 442 aa12.16□□□□□ -0.46
RAPGEF4-207ENST00000466030 VPS8Q8N3P4 1428 aa12.16□□□□□ -0.46
RAPGEF4-207ENST00000466030 C9orf84Q5VXU9 1444 aa12.15□□□□□ -0.46
RAPGEF4-207ENST00000466030 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF4-207ENST00000466030 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF4-207ENST00000466030 FER1L4A9Z1Z3 1794 aa12.15□□□□□ -0.46
RAPGEF4-207ENST00000466030 MLH3Q9UHC1 1453 aa12.14□□□□□ -0.47
RAPGEF4-207ENST00000466030 HNRNPMP52272 730 aaKnown RBP eCLIP12.14□□□□□ -0.47
RAPGEF4-207ENST00000466030 MLECQ14165 292 aa12.14□□□□□ -0.47
RAPGEF4-207ENST00000466030 CCNB3Q8WWL7 1395 aa12.14□□□□□ -0.47
RAPGEF4-207ENST00000466030 ZNF644Q9H582 1327 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF4-207ENST00000466030 CFDP1Q9UEE9 299 aaPredicted RBP12.12□□□□□ -0.47
RAPGEF4-207ENST00000466030 NCOA2Q15596 1464 aa12.12□□□□□ -0.47
RAPGEF4-207ENST00000466030 SUPT6HQ7KZ85 1726 aaKnown RBP12.11□□□□□ -0.47
RAPGEF4-207ENST00000466030 REREQ9P2R6 1566 aa12.11□□□□□ -0.47
RAPGEF4-207ENST00000466030 KANK4Q5T7N3 995 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF4-207ENST00000466030 KIAA1107Q9UPP5 1409 aa12.1□□□□□ -0.47
RAPGEF4-207ENST00000466030 INO80Q9ULG1 1556 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF4-207ENST00000466030 LRRC9Q6ZRR7 1453 aa12.09□□□□□ -0.47
RAPGEF4-207ENST00000466030 MBD5Q9P267 1494 aa12.09□□□□□ -0.47
RAPGEF4-207ENST00000466030 STAG3Q9UJ98 1225 aa12.09□□□□□ -0.47
RAPGEF4-207ENST00000466030 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
RAPGEF4-207ENST00000466030 AGLP35573 1532 aa12.07□□□□□ -0.48
RAPGEF4-207ENST00000466030 ATP7AQ04656 1500 aa12.07□□□□□ -0.48
RAPGEF4-207ENST00000466030 PLEKHH2Q8IVE3 1493 aa12.07□□□□□ -0.48
RAPGEF4-207ENST00000466030 LMTK3Q96Q04 1460 aa12.07□□□□□ -0.48
RAPGEF4-207ENST00000466030 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
RAPGEF4-207ENST00000466030 CHGAP10645 457 aaKnown RBP12.06□□□□□ -0.48
RAPGEF4-207ENST00000466030 CEBPAP49715 358 aaPredicted RBP12.06□□□□□ -0.48
RAPGEF4-207ENST00000466030 SPAG9O60271 1321 aaKnown RBP12.06□□□□□ -0.48
RAPGEF4-207ENST00000466030 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
RAPGEF4-207ENST00000466030 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
RAPGEF4-207ENST00000466030 SETD1BQ9UPS6 1966 aaKnown RBP12.04□□□□□ -0.48
RAPGEF4-207ENST00000466030 PLXNC1O60486 1568 aa12.04□□□□□ -0.48
RAPGEF4-207ENST00000466030 C3P01024 1663 aa12.03□□□□□ -0.48
RAPGEF4-207ENST00000466030 ADGBQ8N7X0 1667 aa12.03□□□□□ -0.48
RAPGEF4-207ENST00000466030 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
RAPGEF4-207ENST00000466030 HSPA2P54652 639 aa12.01□□□□□ -0.49
RAPGEF4-207ENST00000466030 A2MP01023 1474 aa12.01□□□□□ -0.49
RAPGEF4-207ENST00000466030 MIER1Q8N108 512 aa12□□□□□ -0.49
RAPGEF4-207ENST00000466030 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
RAPGEF4-207ENST00000466030 CCDC141Q6ZP82 1450 aa12□□□□□ -0.49
RAPGEF4-207ENST00000466030 ARHGEF5Q12774 1597 aa12□□□□□ -0.49
RAPGEF4-207ENST00000466030 RTEL1-TNFRSF6BF6WH68 1400 aa11.99□□□□□ -0.49
RAPGEF4-207ENST00000466030 MYOM3Q5VTT5 1437 aa11.99□□□□□ -0.49
RAPGEF4-207ENST00000466030 PREX1Q8TCU6 1659 aa11.99□□□□□ -0.49
RAPGEF4-207ENST00000466030 CLTCQ00610 1675 aaKnown RBP11.98□□□□□ -0.49
RAPGEF4-207ENST00000466030 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
RAPGEF4-207ENST00000466030 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
RAPGEF4-207ENST00000466030 TIMELESSQ9UNS1 1208 aa11.98□□□□□ -0.49
RAPGEF4-207ENST00000466030 MROH2AA6NES4 1674 aa11.97□□□□□ -0.49
RAPGEF4-207ENST00000466030 DHX29Q7Z478 1369 aaKnown RBP11.95□□□□□ -0.5
RAPGEF4-207ENST00000466030 STRCQ7RTU9 1775 aa11.95□□□□□ -0.5
RAPGEF4-207ENST00000466030 MIA2Q96PC5 1412 aa11.94□□□□□ -0.5
RAPGEF4-207ENST00000466030 MAST1Q9Y2H9 1570 aa11.94□□□□□ -0.5
RAPGEF4-207ENST00000466030 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
RAPGEF4-207ENST00000466030 GGT6Q6P531 493 aa11.94□□□□□ -0.5
RAPGEF4-207ENST00000466030 ZMYM3Q14202 1370 aa11.93□□□□□ -0.5
RAPGEF4-207ENST00000466030 PTPN23Q9H3S7 1636 aa11.93□□□□□ -0.5
RAPGEF4-207ENST00000466030 CREBZFQ9NS37 354 aa11.93□□□□□ -0.5
RAPGEF4-207ENST00000466030 CNTLNQ9NXG0 1405 aa11.93□□□□□ -0.5
RAPGEF4-207ENST00000466030 RSPH4AQ5TD94 716 aa11.92□□□□□ -0.5
RAPGEF4-207ENST00000466030 CROCC2H7BZ55 1655 aa11.91□□□□□ -0.5
RAPGEF4-207ENST00000466030 TULP1O00294 542 aaPredicted RBP11.91□□□□□ -0.5
RAPGEF4-207ENST00000466030 NBR1Q14596 966 aa11.91□□□□□ -0.5
RAPGEF4-207ENST00000466030 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
RAPGEF4-207ENST00000466030 ABCC5O15440 1437 aa11.91□□□□□ -0.5
RAPGEF4-207ENST00000466030 KIF3BO15066 747 aa11.9□□□□□ -0.5
RAPGEF4-207ENST00000466030 PTPRKQ15262 1439 aa11.9□□□□□ -0.5
RAPGEF4-207ENST00000466030 UHRF1BP1Q6BDS2 1440 aa11.9□□□□□ -0.5
RAPGEF4-207ENST00000466030 FGD6Q6ZV73 1430 aa11.9□□□□□ -0.5
RAPGEF4-207ENST00000466030 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
RAPGEF4-207ENST00000466030 TCOF1Q13428 1488 aaKnown RBP11.89□□□□□ -0.51
RAPGEF4-207ENST00000466030 TSPY4P0CV99 314 aa11.89□□□□□ -0.51
RAPGEF4-207ENST00000466030 TSPY10P0CW01 314 aa11.89□□□□□ -0.51
RAPGEF4-207ENST00000466030 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF4-207ENST00000466030 CFAP65Q6ZU64 1925 aaKnown RBP11.89□□□□□ -0.51
RAPGEF4-207ENST00000466030 DNMT1P26358 1616 aaKnown RBP11.89□□□□□ -0.51
RAPGEF4-207ENST00000466030 MROH1Q8NDA8 1641 aa11.89□□□□□ -0.51
RAPGEF4-207ENST00000466030 MNX1P50219 401 aaPredicted RBP11.88□□□□□ -0.51
RAPGEF4-207ENST00000466030 RNF25Q96BH1 459 aaPredicted RBP11.88□□□□□ -0.51
RAPGEF4-207ENST00000466030 RNF17Q9BXT8 1623 aaKnown RBP11.88□□□□□ -0.51
RAPGEF4-207ENST00000466030 NPATQ14207 1427 aa11.87□□□□□ -0.51
RAPGEF4-207ENST00000466030 MYO3AQ8NEV4 1616 aa11.87□□□□□ -0.51
RAPGEF4-207ENST00000466030 HS6ST3Q8IZP7 471 aa11.87□□□□□ -0.51
RAPGEF4-207ENST00000466030 DAPK1P53355 1430 aa11.86□□□□□ -0.51
RAPGEF4-207ENST00000466030 ZNF142P52746 1687 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF4-207ENST00000466030 CEP152O94986 1710 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms