RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 ZNF644Q9H582 1327 aaPredicted RBP13.7□□□□□ -0.22
DDR1-242ENST00000465966 WASHC2CQ9Y4E1 1318 aa13.7□□□□□ -0.22
DDR1-242ENST00000465966 CPS1P31327 1500 aa13.69□□□□□ -0.22
DDR1-242ENST00000465966 RSPH4AQ5TD94 716 aa13.69□□□□□ -0.22
DDR1-242ENST00000465966 FBXO31Q5XUX0 539 aaPredicted RBP13.69□□□□□ -0.22
DDR1-242ENST00000465966 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
DDR1-242ENST00000465966 LOC105371045A0A1W2PR82 267 aa13.68□□□□□ -0.22
DDR1-242ENST00000465966 SHANK2Q9UPX8 1470 aa13.67□□□□□ -0.22
DDR1-242ENST00000465966 DNMT1P26358 1616 aaKnown RBP13.67□□□□□ -0.22
DDR1-242ENST00000465966 MBD5Q9P267 1494 aa13.67□□□□□ -0.22
DDR1-242ENST00000465966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.66□□□□□ -0.22
DDR1-242ENST00000465966 ADGBQ8N7X0 1667 aa13.66□□□□□ -0.22
DDR1-242ENST00000465966 PZPP20742 1482 aa13.65□□□□□ -0.22
DDR1-242ENST00000465966 MIA2Q96PC5 1412 aa13.64□□□□□ -0.23
DDR1-242ENST00000465966 TSPY4P0CV99 314 aa13.64□□□□□ -0.23
DDR1-242ENST00000465966 TSPY10P0CW01 314 aa13.64□□□□□ -0.23
DDR1-242ENST00000465966 MED1Q15648 1581 aaPredicted RBP13.63□□□□□ -0.23
DDR1-242ENST00000465966 NLRP1Q9C000 1473 aa13.63□□□□□ -0.23
DDR1-242ENST00000465966 KDM5DQ9BY66 1539 aa13.63□□□□□ -0.23
DDR1-242ENST00000465966 FAM135AQ9P2D6 1515 aa13.63□□□□□ -0.23
DDR1-242ENST00000465966 CEP162Q5TB80 1403 aa13.63□□□□□ -0.23
DDR1-242ENST00000465966 NPHP4O75161 1426 aaPredicted RBP13.62□□□□□ -0.23
DDR1-242ENST00000465966 CCDC141Q6ZP82 1450 aa13.61□□□□□ -0.23
DDR1-242ENST00000465966 EHBP1L1Q8N3D4 1523 aa13.61□□□□□ -0.23
DDR1-242ENST00000465966 TIAM1Q13009 1591 aa13.6□□□□□ -0.23
DDR1-242ENST00000465966 UGGT1Q9NYU2 1555 aa13.6□□□□□ -0.23
DDR1-242ENST00000465966 NEURL4Q96JN8 1562 aa13.59□□□□□ -0.23
DDR1-242ENST00000465966 MED14O60244 1454 aa13.59□□□□□ -0.23
DDR1-242ENST00000465966 SENP3Q9H4L4 574 aaPredicted RBP13.58□□□□□ -0.24
DDR1-242ENST00000465966 VWDEQ8N2E2 1590 aa13.57□□□□□ -0.24
DDR1-242ENST00000465966 CAMSAP2Q08AD1 1489 aa13.56□□□□□ -0.24
DDR1-242ENST00000465966 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
DDR1-242ENST00000465966 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
DDR1-242ENST00000465966 DEPDC5O75140 1603 aa13.54□□□□□ -0.24
DDR1-242ENST00000465966 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
DDR1-242ENST00000465966 EID1Q9Y6B2 187 aa13.51□□□□□ -0.25
DDR1-242ENST00000465966 TXNDC2Q86VQ3 553 aa13.5□□□□□ -0.25
DDR1-242ENST00000465966 IQGAP1P46940 1657 aa13.5□□□□□ -0.25
DDR1-242ENST00000465966 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
DDR1-242ENST00000465966 ARHGEF5Q12774 1597 aa13.49□□□□□ -0.25
DDR1-242ENST00000465966 ABCC3O15438 1527 aa13.49□□□□□ -0.25
DDR1-242ENST00000465966 ERVK-7P63135 1459 aa13.48□□□□□ -0.25
DDR1-242ENST00000465966 SCAF11Q99590 1463 aaKnown RBP13.48□□□□□ -0.25
DDR1-242ENST00000465966 RNF17Q9BXT8 1623 aaKnown RBP13.47□□□□□ -0.25
DDR1-242ENST00000465966 LTKP29376 864 aa13.47□□□□□ -0.25
DDR1-242ENST00000465966 STAG3Q9UJ98 1225 aa13.47□□□□□ -0.25
DDR1-242ENST00000465966 SYNMO15061 1565 aa13.46□□□□□ -0.25
DDR1-242ENST00000465966 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
DDR1-242ENST00000465966 ZC3H13Q5T200 1668 aaKnown RBP13.44□□□□□ -0.26
DDR1-242ENST00000465966 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
DDR1-242ENST00000465966 MYOM3Q5VTT5 1437 aa13.42□□□□□ -0.26
DDR1-242ENST00000465966 LRRC9Q6ZRR7 1453 aa13.42□□□□□ -0.26
DDR1-242ENST00000465966 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
DDR1-242ENST00000465966 MAST1Q9Y2H9 1570 aa13.41□□□□□ -0.26
DDR1-242ENST00000465966 ARHGAP31Q2M1Z3 1444 aa13.41□□□□□ -0.26
DDR1-242ENST00000465966 SLIT1O75093 1534 aa13.41□□□□□ -0.26
DDR1-242ENST00000465966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.26
DDR1-242ENST00000465966 EIF2AK4Q9P2K8 1649 aaKnown RBP13.41□□□□□ -0.26
DDR1-242ENST00000465966 TMEM2Q9UHN6 1383 aa13.41□□□□□ -0.26
DDR1-242ENST00000465966 DUOX2Q9NRD8 1548 aa13.4□□□□□ -0.26
DDR1-242ENST00000465966 KCNA6P17658 529 aa13.4□□□□□ -0.26
DDR1-242ENST00000465966 PROSER2Q86WR7 435 aaPredicted RBP13.4□□□□□ -0.26
DDR1-242ENST00000465966 RRP7BPQ9NSQ0 103 aa13.4□□□□□ -0.26
DDR1-242ENST00000465966 KANK1Q14678 1352 aa13.4□□□□□ -0.26
DDR1-242ENST00000465966 TMEM94Q12767 1356 aa13.39□□□□□ -0.27
DDR1-242ENST00000465966 KIF15Q9NS87 1388 aa13.39□□□□□ -0.27
DDR1-242ENST00000465966 STRCP1A6NGW2 1772 aa13.39□□□□□ -0.27
DDR1-242ENST00000465966 KANK4Q5T7N3 995 aaPredicted RBP13.38□□□□□ -0.27
DDR1-242ENST00000465966 POTEAQ6S8J7 498 aa13.38□□□□□ -0.27
DDR1-242ENST00000465966 BCANQ96GW7 911 aa13.38□□□□□ -0.27
DDR1-242ENST00000465966 VPS8Q8N3P4 1428 aa13.38□□□□□ -0.27
DDR1-242ENST00000465966 ERBINQ96RT1 1412 aa13.38□□□□□ -0.27
DDR1-242ENST00000465966 UBR1Q8IWV7 1749 aa13.37□□□□□ -0.27
DDR1-242ENST00000465966 SLC26A8Q96RN1 970 aa13.37□□□□□ -0.27
DDR1-242ENST00000465966 MROH1Q8NDA8 1641 aa13.36□□□□□ -0.27
DDR1-242ENST00000465966 IDI1Q13907 227 aa13.36□□□□□ -0.27
DDR1-242ENST00000465966 MSH6P52701 1360 aa13.34□□□□□ -0.27
DDR1-242ENST00000465966 APLP2Q06481 763 aa13.34□□□□□ -0.27
DDR1-242ENST00000465966 RBM33Q96EV2 1170 aaKnown RBP13.34□□□□□ -0.27
DDR1-242ENST00000465966 PRDM15P57071 1507 aaPredicted RBP13.34□□□□□ -0.27
DDR1-242ENST00000465966 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
DDR1-242ENST00000465966 SLC52A1Q9NWF4 448 aa13.33□□□□□ -0.28
DDR1-242ENST00000465966 SLAIN2Q9P270 581 aa13.33□□□□□ -0.28
DDR1-242ENST00000465966 EFCAB6Q5THR3 1501 aa13.33□□□□□ -0.28
DDR1-242ENST00000465966 ABCC5O15440 1437 aa13.32□□□□□ -0.28
DDR1-242ENST00000465966 MAP3K1Q13233 1512 aa13.32□□□□□ -0.28
DDR1-242ENST00000465966 CEP152O94986 1710 aa13.31□□□□□ -0.28
DDR1-242ENST00000465966 ANKRD30AQ9BXX3 1397 aa13.31□□□□□ -0.28
DDR1-242ENST00000465966 JCADQ9P266 1359 aa13.31□□□□□ -0.28
DDR1-242ENST00000465966 PPP1R15AO75807 674 aaPredicted RBP13.3□□□□□ -0.28
DDR1-242ENST00000465966 NKTRP30414 1462 aaKnown RBP13.29□□□□□ -0.28
DDR1-242ENST00000465966 PIK3C2BO00750 1634 aa13.29□□□□□ -0.28
DDR1-242ENST00000465966 CHIC2Q9UKJ5 165 aa13.29□□□□□ -0.28
DDR1-242ENST00000465966 DAPK1P53355 1430 aa13.28□□□□□ -0.28
DDR1-242ENST00000465966 LMTK2Q8IWU2 1503 aa13.28□□□□□ -0.28
DDR1-242ENST00000465966 MEX3CQ5U5Q3 659 aaKnown RBP13.27□□□□□ -0.29
DDR1-242ENST00000465966 C14orf37Q86TY3 774 aa13.27□□□□□ -0.29
DDR1-242ENST00000465966 TET3O43151 1660 aa13.27□□□□□ -0.29
DDR1-242ENST00000465966 ROBO1Q9Y6N7 1651 aa13.27□□□□□ -0.29
DDR1-242ENST00000465966 NOS1P29475 1434 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms