RNA–Protein interactions for RNA: ENST00000465842.1

CHKB-204, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-204ENST00000465842 ANKRD30AQ9BXX3 1397 aa29.01■■■□□ 2.23
CHKB-204ENST00000465842 EIF2AK4Q9P2K8 1649 aaKnown RBP28.99■■■□□ 2.23
CHKB-204ENST00000465842 HSPA2P54652 639 aa28.99■■■□□ 2.23
CHKB-204ENST00000465842 UHRF1BP1Q6BDS2 1440 aa28.99■■■□□ 2.23
CHKB-204ENST00000465842 WASHC2CQ9Y4E1 1318 aa28.98■■■□□ 2.23
CHKB-204ENST00000465842 KDM5DQ9BY66 1539 aa28.98■■■□□ 2.23
CHKB-204ENST00000465842 FAM135AQ9P2D6 1515 aa28.95■■■□□ 2.23
CHKB-204ENST00000465842 RNF17Q9BXT8 1623 aaKnown RBP28.94■■■□□ 2.22
CHKB-204ENST00000465842 NPATQ14207 1427 aa28.94■■■□□ 2.22
CHKB-204ENST00000465842 ERBINQ96RT1 1412 aa28.94■■■□□ 2.22
CHKB-204ENST00000465842 NCOA1Q15788 1441 aa28.91■■■□□ 2.22
CHKB-204ENST00000465842 SETD1BQ9UPS6 1966 aaKnown RBP28.9■■■□□ 2.22
CHKB-204ENST00000465842 ADGRL2O95490 1459 aa28.9■■■□□ 2.22
CHKB-204ENST00000465842 PTPRKQ15262 1439 aa28.89■■■□□ 2.22
CHKB-204ENST00000465842 ITGAEP38570 1179 aa28.89■■■□□ 2.22
CHKB-204ENST00000465842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.85■■■□□ 2.211e-7■■□□□ 13.7
CHKB-204ENST00000465842 ZC3H13Q5T200 1668 aaKnown RBP28.85■■■□□ 2.21
CHKB-204ENST00000465842 ABCC3O15438 1527 aa28.84■■■□□ 2.21
CHKB-204ENST00000465842 MROH1Q8NDA8 1641 aa28.84■■■□□ 2.21
CHKB-204ENST00000465842 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.83■■■□□ 2.21
CHKB-204ENST00000465842 PZPP20742 1482 aa28.83■■■□□ 2.21
CHKB-204ENST00000465842 KANK1Q14678 1352 aa28.81■■■□□ 2.2
CHKB-204ENST00000465842 MYO3AQ8NEV4 1616 aa28.8■■■□□ 2.2
CHKB-204ENST00000465842 PRDM15P57071 1507 aaPredicted RBP28.8■■■□□ 2.2
CHKB-204ENST00000465842 FBXO31Q5XUX0 539 aaPredicted RBP28.8■■■□□ 2.2
CHKB-204ENST00000465842 CEP152O94986 1710 aa28.79■■■□□ 2.2
CHKB-204ENST00000465842 TNRQ92752 1358 aa28.78■■■□□ 2.2
CHKB-204ENST00000465842 ANKRD50Q9ULJ7 1429 aa28.77■■■□□ 2.2
CHKB-204ENST00000465842 RRBP1Q9P2E9 1410 aaKnown RBP28.77■■■□□ 2.2
CHKB-204ENST00000465842 DEPDC5O75140 1603 aa28.76■■■□□ 2.2
CHKB-204ENST00000465842 ROCK1Q13464 1354 aa28.75■■■□□ 2.19
CHKB-204ENST00000465842 CAMSAP1Q5T5Y3 1602 aa28.75■■■□□ 2.19
CHKB-204ENST00000465842 CEP170BQ9Y4F5 1589 aaPredicted RBP28.74■■■□□ 2.19
CHKB-204ENST00000465842 ZNF142P52746 1687 aaPredicted RBP28.72■■■□□ 2.19
CHKB-204ENST00000465842 A2ML1A8K2U0 1454 aa28.69■■■□□ 2.18
CHKB-204ENST00000465842 DMRT2Q9Y5R5 561 aa28.67■■■□□ 2.18
CHKB-204ENST00000465842 ERVK-7P63135 1459 aa28.66■■■□□ 2.18
CHKB-204ENST00000465842 SPATA31D1Q6ZQQ2 1576 aa28.65■■■□□ 2.18
CHKB-204ENST00000465842 STRCQ7RTU9 1775 aa28.65■■■□□ 2.18
CHKB-204ENST00000465842 VWDEQ8N2E2 1590 aa28.63■■■□□ 2.17
CHKB-204ENST00000465842 ARHGAP31Q2M1Z3 1444 aa28.63■■■□□ 2.17
CHKB-204ENST00000465842 NLRP1Q9C000 1473 aa28.63■■■□□ 2.17
CHKB-204ENST00000465842 LMTK2Q8IWU2 1503 aa28.63■■■□□ 2.17
CHKB-204ENST00000465842 PLA2R1Q13018 1463 aa28.59■■■□□ 2.17
CHKB-204ENST00000465842 CFAP65Q6ZU64 1925 aaKnown RBP28.58■■■□□ 2.17
CHKB-204ENST00000465842 UNC13BO14795 1591 aa28.58■■■□□ 2.17
CHKB-204ENST00000465842 NCKAP5LQ9HCH0 1330 aa28.57■■■□□ 2.16
CHKB-204ENST00000465842 EFCAB6Q5THR3 1501 aa28.57■■■□□ 2.16
CHKB-204ENST00000465842 UGGT1Q9NYU2 1555 aa28.56■■■□□ 2.16
CHKB-204ENST00000465842 THEMISQ8N1K5 641 aaPredicted RBP28.55■■■□□ 2.16
CHKB-204ENST00000465842 PTPRTO14522 1441 aa28.54■■■□□ 2.16
CHKB-204ENST00000465842 PKD2Q13563 968 aa28.54■■■□□ 2.16
CHKB-204ENST00000465842 TET3O43151 1660 aa28.51■■■□□ 2.15
CHKB-204ENST00000465842 NUP155O75694 1391 aa28.5■■■□□ 2.15
CHKB-204ENST00000465842 NAIPQ13075 1403 aa28.47■■■□□ 2.15
CHKB-204ENST00000465842 GCC2Q8IWJ2 1684 aa28.47■■■□□ 2.15
CHKB-204ENST00000465842 IQGAP3Q86VI3 1631 aa28.47■■■□□ 2.15
CHKB-204ENST00000465842 RPRD2Q5VT52 1461 aaKnown RBP28.46■■■□□ 2.15
CHKB-204ENST00000465842 STAG3Q9UJ98 1225 aa28.46■■■□□ 2.15
CHKB-204ENST00000465842 ANKLE2Q86XL3 938 aa28.45■■■□□ 2.14
CHKB-204ENST00000465842 POLR1AO95602 1720 aaPredicted RBP28.43■■■□□ 2.14
CHKB-204ENST00000465842 HFM1A2PYH4 1435 aa28.43■■■□□ 2.14
CHKB-204ENST00000465842 NOS1P29475 1434 aa28.43■■■□□ 2.14
CHKB-204ENST00000465842 SYNMO15061 1565 aa28.42■■■□□ 2.14
CHKB-204ENST00000465842 UBR1Q8IWV7 1749 aa28.42■■■□□ 2.14
CHKB-204ENST00000465842 PIK3C2BO00750 1634 aa28.4■■■□□ 2.14
CHKB-204ENST00000465842 IDI1Q13907 227 aa28.39■■■□□ 2.14
CHKB-204ENST00000465842 E9PCH4 1651 aa28.38■■■□□ 2.13
CHKB-204ENST00000465842 TRIM52Q96A61 297 aa28.37■■■□□ 2.13
CHKB-204ENST00000465842 SLC52A1Q9NWF4 448 aa28.37■■■□□ 2.13
CHKB-204ENST00000465842 CERKQ8TCT0 537 aa28.36■■■□□ 2.13
CHKB-204ENST00000465842 NEURL4Q96JN8 1562 aa28.36■■■□□ 2.13
CHKB-204ENST00000465842 NPHP4O75161 1426 aaPredicted RBP28.34■■■□□ 2.13
CHKB-204ENST00000465842 ILDR1Q86SU0 546 aaPredicted RBP28.32■■■□□ 2.12
CHKB-204ENST00000465842 EID1Q9Y6B2 187 aa28.32■■■□□ 2.12
CHKB-204ENST00000465842 ADGRB3O60242 1522 aa28.31■■■□□ 2.12
CHKB-204ENST00000465842 SCAF11Q99590 1463 aaKnown RBP28.3■■■□□ 2.12
CHKB-204ENST00000465842 ZNF335Q9H4Z2 1342 aaPredicted RBP28.3■■■□□ 2.12
CHKB-204ENST00000465842 TXNDC2Q86VQ3 553 aa28.3■■■□□ 2.12
CHKB-204ENST00000465842 KDM5AP29375 1690 aaKnown RBP28.29■■■□□ 2.12
CHKB-204ENST00000465842 SLIT1O75093 1534 aa28.29■■■□□ 2.12
CHKB-204ENST00000465842 MED14O60244 1454 aa28.28■■■□□ 2.12
CHKB-204ENST00000465842 ARHGAP23Q9P227 1491 aa28.28■■■□□ 2.12
CHKB-204ENST00000465842 TMEM2Q9UHN6 1383 aa28.28■■■□□ 2.12
CHKB-204ENST00000465842 CHGAP10645 457 aaKnown RBP28.28■■■□□ 2.12
CHKB-204ENST00000465842 IQGAP1P46940 1657 aa28.27■■■□□ 2.12
CHKB-204ENST00000465842 FBXO41Q8TF61 875 aa28.27■■■□□ 2.12
CHKB-204ENST00000465842 LTBP4Q8N2S1 1624 aa28.25■■■□□ 2.11
CHKB-204ENST00000465842 LTKP29376 864 aa28.24■■■□□ 2.11
CHKB-204ENST00000465842 SLC4A1APQ9BWU0 796 aaKnown RBP28.21■■■□□ 2.11
CHKB-204ENST00000465842 SPHKAPQ2M3C7 1700 aa28.21■■■□□ 2.11
CHKB-204ENST00000465842 TMEM131LA2VDJ0 1609 aa28.18■■■□□ 2.1
CHKB-204ENST00000465842 SETD5Q9C0A6 1442 aa28.17■■■□□ 2.1
CHKB-204ENST00000465842 PPP1R15AO75807 674 aaPredicted RBP28.16■■■□□ 2.1
CHKB-204ENST00000465842 HDGFP51858 240 aaKnown RBP28.16■■■□□ 2.1
CHKB-204ENST00000465842 BCANQ96GW7 911 aa28.16■■■□□ 2.1
CHKB-204ENST00000465842 MYO5BQ9ULV0 1848 aa28.15■■■□□ 2.1
CHKB-204ENST00000465842 RIMS2Q9UQ26 1411 aa28.14■■■□□ 2.1
CHKB-204ENST00000465842 CPS1P31327 1500 aa28.12■■■□□ 2.09
CHKB-204ENST00000465842 IQSEC2Q5JU85 1478 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms