RNA–Protein interactions for RNA: ENST00000464518.1

SLC13A3-208, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 792 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-208ENST00000464518 DNMT1P26358 1616 aaKnown RBP20.64■□□□□ 0.9
SLC13A3-208ENST00000464518 RTEL1-TNFRSF6BF6WH68 1400 aa20.64■□□□□ 0.89
SLC13A3-208ENST00000464518 CCNB3Q8WWL7 1395 aa20.64■□□□□ 0.89
SLC13A3-208ENST00000464518 POLR1AO95602 1720 aaPredicted RBP20.62■□□□□ 0.89
SLC13A3-208ENST00000464518 GGT6Q6P531 493 aa20.62■□□□□ 0.89
SLC13A3-208ENST00000464518 NEURL4Q96JN8 1562 aa20.58■□□□□ 0.88
SLC13A3-208ENST00000464518 MBD5Q9P267 1494 aa20.57■□□□□ 0.88
SLC13A3-208ENST00000464518 TOM1O60784 492 aa20.57■□□□□ 0.88
SLC13A3-208ENST00000464518 MED1Q15648 1581 aaPredicted RBP20.57■□□□□ 0.88
SLC13A3-208ENST00000464518 MTUS2Q5JR59 1369 aa20.57■□□□□ 0.88
SLC13A3-208ENST00000464518 DHX29Q7Z478 1369 aaKnown RBP20.57■□□□□ 0.88
SLC13A3-208ENST00000464518 PZPP20742 1482 aa20.56■□□□□ 0.88
SLC13A3-208ENST00000464518 KDM5DQ9BY66 1539 aa20.56■□□□□ 0.88
SLC13A3-208ENST00000464518 SHANK2Q9UPX8 1470 aa20.56■□□□□ 0.88
SLC13A3-208ENST00000464518 TIAM1Q13009 1591 aa20.55■□□□□ 0.88
SLC13A3-208ENST00000464518 EHBP1L1Q8N3D4 1523 aa20.54■□□□□ 0.88
SLC13A3-208ENST00000464518 TNRQ92752 1358 aa20.54■□□□□ 0.88
SLC13A3-208ENST00000464518 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
SLC13A3-208ENST00000464518 MED14O60244 1454 aa20.52■□□□□ 0.88
SLC13A3-208ENST00000464518 NLRP1Q9C000 1473 aa20.52■□□□□ 0.88
SLC13A3-208ENST00000464518 CEP162Q5TB80 1403 aa20.51■□□□□ 0.87
SLC13A3-208ENST00000464518 HSPA1LP34931 641 aa20.5■□□□□ 0.87
SLC13A3-208ENST00000464518 RSPH4AQ5TD94 716 aa20.49■□□□□ 0.87
SLC13A3-208ENST00000464518 VWDEQ8N2E2 1590 aa20.48■□□□□ 0.87
SLC13A3-208ENST00000464518 ANKLE2Q86XL3 938 aa20.48■□□□□ 0.87
SLC13A3-208ENST00000464518 THEMISQ8N1K5 641 aaPredicted RBP20.48■□□□□ 0.87
SLC13A3-208ENST00000464518 CCDC141Q6ZP82 1450 aa20.48■□□□□ 0.87
SLC13A3-208ENST00000464518 UGGT1Q9NYU2 1555 aa20.46■□□□□ 0.87
SLC13A3-208ENST00000464518 MIA2Q96PC5 1412 aa20.45■□□□□ 0.86
SLC13A3-208ENST00000464518 KIF3BO15066 747 aa20.44■□□□□ 0.86
SLC13A3-208ENST00000464518 PIP4K2BP78356 416 aa20.44■□□□□ 0.86
SLC13A3-208ENST00000464518 ZNF644Q9H582 1327 aaPredicted RBP20.44■□□□□ 0.86
SLC13A3-208ENST00000464518 NPHP4O75161 1426 aaPredicted RBP20.44■□□□□ 0.86
SLC13A3-208ENST00000464518 SYNMO15061 1565 aa20.43■□□□□ 0.86
SLC13A3-208ENST00000464518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.43■□□□□ 0.86
SLC13A3-208ENST00000464518 ALKQ9UM73 1620 aa20.42■□□□□ 0.86
SLC13A3-208ENST00000464518 FBXO31Q5XUX0 539 aaPredicted RBP20.42■□□□□ 0.86
SLC13A3-208ENST00000464518 WASHC2CQ9Y4E1 1318 aa20.42■□□□□ 0.86
SLC13A3-208ENST00000464518 IQGAP1P46940 1657 aa20.42■□□□□ 0.86
SLC13A3-208ENST00000464518 ZC3H13Q5T200 1668 aaKnown RBP20.42■□□□□ 0.86
SLC13A3-208ENST00000464518 ARHGEF5Q12774 1597 aa20.4■□□□□ 0.86
SLC13A3-208ENST00000464518 RNF17Q9BXT8 1623 aaKnown RBP20.39■□□□□ 0.86
SLC13A3-208ENST00000464518 CAMSAP2Q08AD1 1489 aa20.39■□□□□ 0.85
SLC13A3-208ENST00000464518 CNKSR2Q8WXI2 1034 aa20.37■□□□□ 0.85
SLC13A3-208ENST00000464518 DCAF8L1A6NGE4 600 aa20.36■□□□□ 0.85
SLC13A3-208ENST00000464518 EIF2AK4Q9P2K8 1649 aaKnown RBP20.35■□□□□ 0.85
SLC13A3-208ENST00000464518 LRRC7Q96NW7 1537 aa20.34■□□□□ 0.85
SLC13A3-208ENST00000464518 HOXD11P31277 338 aaPredicted RBP20.34■□□□□ 0.85
SLC13A3-208ENST00000464518 NCOA2Q15596 1464 aa20.34■□□□□ 0.85
SLC13A3-208ENST00000464518 MAST1Q9Y2H9 1570 aa20.33■□□□□ 0.84
SLC13A3-208ENST00000464518 ABCC3O15438 1527 aa20.32■□□□□ 0.84
SLC13A3-208ENST00000464518 TSPY4P0CV99 314 aa20.31■□□□□ 0.84
SLC13A3-208ENST00000464518 TSPY10P0CW01 314 aa20.31■□□□□ 0.84
SLC13A3-208ENST00000464518 STRCP1A6NGW2 1772 aa20.31■□□□□ 0.84
SLC13A3-208ENST00000464518 ERVK-7P63135 1459 aa20.3■□□□□ 0.84
SLC13A3-208ENST00000464518 UBR1Q8IWV7 1749 aa20.27■□□□□ 0.84
SLC13A3-208ENST00000464518 SCAF11Q99590 1463 aaKnown RBP20.26■□□□□ 0.83
SLC13A3-208ENST00000464518 SLIT1O75093 1534 aa20.26■□□□□ 0.83
SLC13A3-208ENST00000464518 ARHGAP23Q9P227 1491 aa20.25■□□□□ 0.83
SLC13A3-208ENST00000464518 MROH1Q8NDA8 1641 aa20.24■□□□□ 0.83
SLC13A3-208ENST00000464518 ARHGAP31Q2M1Z3 1444 aa20.22■□□□□ 0.83
SLC13A3-208ENST00000464518 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
SLC13A3-208ENST00000464518 PRDM15P57071 1507 aaPredicted RBP20.19■□□□□ 0.82
SLC13A3-208ENST00000464518 DUOX2Q9NRD8 1548 aa20.19■□□□□ 0.82
SLC13A3-208ENST00000464518 CEP152O94986 1710 aa20.19■□□□□ 0.82
SLC13A3-208ENST00000464518 FAM135BQ49AJ0 1406 aa20.19■□□□□ 0.82
SLC13A3-208ENST00000464518 KDM5AP29375 1690 aaKnown RBP20.18■□□□□ 0.82
SLC13A3-208ENST00000464518 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
SLC13A3-208ENST00000464518 XIRP1Q702N8 1843 aaKnown RBP20.16■□□□□ 0.82
SLC13A3-208ENST00000464518 MYOM3Q5VTT5 1437 aa20.14■□□□□ 0.81
SLC13A3-208ENST00000464518 EID1Q9Y6B2 187 aa20.14■□□□□ 0.81
SLC13A3-208ENST00000464518 MAP3K1Q13233 1512 aa20.13■□□□□ 0.81
SLC13A3-208ENST00000464518 ERBINQ96RT1 1412 aa20.13■□□□□ 0.81
SLC13A3-208ENST00000464518 TXNDC2Q86VQ3 553 aa20.13■□□□□ 0.81
SLC13A3-208ENST00000464518 RGS17Q9UGC6 210 aaPredicted RBP20.13■□□□□ 0.81
SLC13A3-208ENST00000464518 LTKP29376 864 aa20.12■□□□□ 0.81
SLC13A3-208ENST00000464518 TMEM2Q9UHN6 1383 aa20.1■□□□□ 0.81
SLC13A3-208ENST00000464518 VPS8Q8N3P4 1428 aa20.09■□□□□ 0.81
SLC13A3-208ENST00000464518 PIK3C2BO00750 1634 aa20.09■□□□□ 0.81
SLC13A3-208ENST00000464518 CACNB1Q02641 598 aaPredicted RBP20.08■□□□□ 0.81
SLC13A3-208ENST00000464518 EFCAB6Q5THR3 1501 aa20.07■□□□□ 0.8
SLC13A3-208ENST00000464518 NKTRP30414 1462 aaKnown RBP20.06■□□□□ 0.8
SLC13A3-208ENST00000464518 CFAP65Q6ZU64 1925 aaKnown RBP20.06■□□□□ 0.8
SLC13A3-208ENST00000464518 CROCC2H7BZ55 1655 aa20.06■□□□□ 0.8
SLC13A3-208ENST00000464518 LMTK2Q8IWU2 1503 aa20.06■□□□□ 0.8
SLC13A3-208ENST00000464518 KIF15Q9NS87 1388 aa20.06■□□□□ 0.8
SLC13A3-208ENST00000464518 ROBO1Q9Y6N7 1651 aa20.05■□□□□ 0.8
SLC13A3-208ENST00000464518 NWD1Q149M9 1564 aa20.04■□□□□ 0.8
SLC13A3-208ENST00000464518 TET3O43151 1660 aa20.04■□□□□ 0.8
SLC13A3-208ENST00000464518 KCNA6P17658 529 aa20.04■□□□□ 0.8
SLC13A3-208ENST00000464518 TMEM94Q12767 1356 aa20.04■□□□□ 0.8
SLC13A3-208ENST00000464518 KANK1Q14678 1352 aa20.04■□□□□ 0.8
SLC13A3-208ENST00000464518 STAG3Q9UJ98 1225 aa20■□□□□ 0.79
SLC13A3-208ENST00000464518 POTEAQ6S8J7 498 aa19.99■□□□□ 0.79
SLC13A3-208ENST00000464518 ADGRB3O60242 1522 aa19.98■□□□□ 0.79
SLC13A3-208ENST00000464518 ABCC5O15440 1437 aa19.98■□□□□ 0.79
SLC13A3-208ENST00000464518 NOS1P29475 1434 aa19.97■□□□□ 0.79
SLC13A3-208ENST00000464518 MSH6P52701 1360 aa19.96■□□□□ 0.79
SLC13A3-208ENST00000464518 NCBP3Q53F19 620 aaKnown RBP19.96■□□□□ 0.79
SLC13A3-208ENST00000464518 IDI1Q13907 227 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms