RNA–Protein interactions for RNA: ENST00000464469.2

ZNF28-205, Transcript of zinc finger protein 28, humanhuman

TSL 1 (best)

Gene ZNF28, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-205ENST00000464469 ZNF644Q9H582 1327 aaPredicted RBP8.97□□□□□ -0.97
ZNF28-205ENST00000464469 NCKAP5LQ9HCH0 1330 aa8.97□□□□□ -0.97
ZNF28-205ENST00000464469 ABCC1P33527 1531 aa8.96□□□□□ -0.97
ZNF28-205ENST00000464469 EFCAB2Q5VUJ9 269 aa8.96□□□□□ -0.98
ZNF28-205ENST00000464469 GCC2Q8IWJ2 1684 aa8.96□□□□□ -0.98
ZNF28-205ENST00000464469 CCDC141Q6ZP82 1450 aa8.96□□□□□ -0.98
ZNF28-205ENST00000464469 SHANK2Q9UPX8 1470 aa8.96□□□□□ -0.98
ZNF28-205ENST00000464469 ABCC5O15440 1437 aa8.95□□□□□ -0.98
ZNF28-205ENST00000464469 AKNAQ7Z591 1439 aa8.95□□□□□ -0.98
ZNF28-205ENST00000464469 KIAA1107Q9UPP5 1409 aa8.95□□□□□ -0.98
ZNF28-205ENST00000464469 NHSL1Q5SYE7 1610 aa8.94□□□□□ -0.98
ZNF28-205ENST00000464469 CAPN15O75808 1086 aa8.93□□□□□ -0.98
ZNF28-205ENST00000464469 MBD5Q9P267 1494 aa8.93□□□□□ -0.98
ZNF28-205ENST00000464469 C3P01024 1663 aa8.93□□□□□ -0.98
ZNF28-205ENST00000464469 EP400Q96L91 3159 aa8.92□□□□□ -0.98
ZNF28-205ENST00000464469 RNF17Q9BXT8 1623 aaKnown RBP8.92□□□□□ -0.98
ZNF28-205ENST00000464469 MAST1Q9Y2H9 1570 aa8.92□□□□□ -0.98
ZNF28-205ENST00000464469 ADGRL2O95490 1459 aa8.92□□□□□ -0.98
ZNF28-205ENST00000464469 NEO1Q92859 1461 aa8.92□□□□□ -0.98
ZNF28-205ENST00000464469 HFM1A2PYH4 1435 aa8.92□□□□□ -0.98
ZNF28-205ENST00000464469 C9orf84Q5VXU9 1444 aa8.92□□□□□ -0.98
ZNF28-205ENST00000464469 SETD5Q9C0A6 1442 aa8.92□□□□□ -0.98
ZNF28-205ENST00000464469 ROCK1Q13464 1354 aa8.92□□□□□ -0.98
ZNF28-205ENST00000464469 HNRNPMP52272 730 aaKnown RBP eCLIP8.91□□□□□ -0.98
ZNF28-205ENST00000464469 RSPH4AQ5TD94 716 aa8.91□□□□□ -0.98
ZNF28-205ENST00000464469 CHIC2Q9UKJ5 165 aa8.91□□□□□ -0.98
ZNF28-205ENST00000464469 RICTORQ6R327 1708 aa8.91□□□□□ -0.98
ZNF28-205ENST00000464469 NAIPQ13075 1403 aa8.9□□□□□ -0.98
ZNF28-205ENST00000464469 ANKRD30AQ9BXX3 1397 aa8.9□□□□□ -0.98
ZNF28-205ENST00000464469 RAB3GAP2Q9H2M9 1393 aa8.9□□□□□ -0.98
ZNF28-205ENST00000464469 TSPY4P0CV99 314 aa8.9□□□□□ -0.98
ZNF28-205ENST00000464469 TSPY10P0CW01 314 aa8.9□□□□□ -0.98
ZNF28-205ENST00000464469 PPP6R1Q9UPN7 881 aa8.9□□□□□ -0.98
ZNF28-205ENST00000464469 PLXNC1O60486 1568 aa8.9□□□□□ -0.99
ZNF28-205ENST00000464469 RXRBP28702 533 aa8.89□□□□□ -0.99
ZNF28-205ENST00000464469 ZNF518AQ6AHZ1 1483 aa8.89□□□□□ -0.99
ZNF28-205ENST00000464469 SCAPERQ9BY12 1400 aa8.88□□□□□ -0.99
ZNF28-205ENST00000464469 TRAPPC8Q9Y2L5 1435 aa8.88□□□□□ -0.99
ZNF28-205ENST00000464469 INO80Q9ULG1 1556 aaPredicted RBP8.88□□□□□ -0.99
ZNF28-205ENST00000464469 ZNF772Q68DY9 489 aaPredicted RBP8.88□□□□□ -0.99
ZNF28-205ENST00000464469 ZNF784Q8NCA9 323 aaPredicted RBP8.88□□□□□ -0.99
ZNF28-205ENST00000464469 RRP7BPQ9NSQ0 103 aa8.88□□□□□ -0.99
ZNF28-205ENST00000464469 ZFYVE16Q7Z3T8 1539 aa8.88□□□□□ -0.99
ZNF28-205ENST00000464469 PLA2R1Q13018 1463 aa8.88□□□□□ -0.99
ZNF28-205ENST00000464469 RGS12O14924 1447 aa8.88□□□□□ -0.99
ZNF28-205ENST00000464469 ATP7AQ04656 1500 aa8.87□□□□□ -0.99
ZNF28-205ENST00000464469 PKD2Q13563 968 aa8.87□□□□□ -0.99
ZNF28-205ENST00000464469 KIF15Q9NS87 1388 aa8.86□□□□□ -0.99
ZNF28-205ENST00000464469 KDM5CP41229 1560 aa8.86□□□□□ -0.99
ZNF28-205ENST00000464469 DENND4BO75064 1496 aaPredicted RBP8.86□□□□□ -0.99
ZNF28-205ENST00000464469 HRCP23327 699 aa8.86□□□□□ -0.99
ZNF28-205ENST00000464469 CCER1Q8TC90 406 aaPredicted RBP8.86□□□□□ -0.99
ZNF28-205ENST00000464469 RTEL1-TNFRSF6BF6WH68 1400 aa8.86□□□□□ -0.99
ZNF28-205ENST00000464469 SPAG9O60271 1321 aaKnown RBP8.85□□□□□ -0.99
ZNF28-205ENST00000464469 KIDINS220Q9ULH0 1771 aa8.85□□□□□ -0.99
ZNF28-205ENST00000464469 DUOX2Q9NRD8 1548 aa8.85□□□□□ -0.99
ZNF28-205ENST00000464469 ACIN1Q9UKV3 1341 aaKnown RBP8.84□□□□□ -0.99
ZNF28-205ENST00000464469 PRELPP51888 382 aa8.84□□□□□ -0.99
ZNF28-205ENST00000464469 ANKRD50Q9ULJ7 1429 aa8.84□□□□□ -0.99
ZNF28-205ENST00000464469 ZMYM4Q5VZL5 1548 aa8.84□□□□□ -0.99
ZNF28-205ENST00000464469 AFAP1Q8N556 730 aa8.83□□□□□ -1
ZNF28-205ENST00000464469 ATAD2Q6PL18 1390 aa8.83□□□□□ -1
ZNF28-205ENST00000464469 ERBINQ96RT1 1412 aa8.82□□□□□ -1
ZNF28-205ENST00000464469 NUTM2BA6NNL0 878 aaPredicted RBP8.82□□□□□ -1
ZNF28-205ENST00000464469 NUTM2EB1AL46 878 aaPredicted RBP8.82□□□□□ -1
ZNF28-205ENST00000464469 NUTM2DQ5VT03 806 aaPredicted RBP8.82□□□□□ -1
ZNF28-205ENST00000464469 NUTM2AQ8IVF1 878 aaPredicted RBP8.82□□□□□ -1
ZNF28-205ENST00000464469 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
ZNF28-205ENST00000464469 DHX57Q6P158 1386 aaKnown RBP8.82□□□□□ -1
ZNF28-205ENST00000464469 MLH3Q9UHC1 1453 aa8.82□□□□□ -1
ZNF28-205ENST00000464469 VWDEQ8N2E2 1590 aa8.82□□□□□ -1
ZNF28-205ENST00000464469 ZNF142P52746 1687 aaPredicted RBP8.81□□□□□ -1
ZNF28-205ENST00000464469 LRP6O75581 1613 aa8.81□□□□□ -1
ZNF28-205ENST00000464469 ABCA6Q8N139 1617 aa8.81□□□□□ -1
ZNF28-205ENST00000464469 EIF2AK4Q9P2K8 1649 aaKnown RBP8.81□□□□□ -1
ZNF28-205ENST00000464469 UNC13BO14795 1591 aa8.81□□□□□ -1
ZNF28-205ENST00000464469 CLSPNQ9HAW4 1339 aa8.8□□□□□ -1
ZNF28-205ENST00000464469 DIP2CQ9Y2E4 1556 aa8.79□□□□□ -1
ZNF28-205ENST00000464469 KDM5DQ9BY66 1539 aa8.79□□□□□ -1
ZNF28-205ENST00000464469 UTRNP46939 3433 aa8.79□□□□□ -1
ZNF28-205ENST00000464469 MAGI2Q86UL8 1455 aa8.78□□□□□ -1
ZNF28-205ENST00000464469 ZEB1P37275 1124 aaPredicted RBP8.78□□□□□ -1
ZNF28-205ENST00000464469 DEPDC5O75140 1603 aa8.78□□□□□ -1
ZNF28-205ENST00000464469 SYNMO15061 1565 aa8.78□□□□□ -1
ZNF28-205ENST00000464469 A2MP01023 1474 aa8.77□□□□□ -1
ZNF28-205ENST00000464469 POLR1AO95602 1720 aaPredicted RBP8.77□□□□□ -1
ZNF28-205ENST00000464469 IQGAP3Q86VI3 1631 aa8.77□□□□□ -1.01
ZNF28-205ENST00000464469 BCL9LQ86UU0 1499 aa8.77□□□□□ -1.01
ZNF28-205ENST00000464469 DHX29Q7Z478 1369 aaKnown RBP8.76□□□□□ -1.01
ZNF28-205ENST00000464469 FAM135BQ49AJ0 1406 aa8.76□□□□□ -1.01
ZNF28-205ENST00000464469 NEURL4Q96JN8 1562 aa8.76□□□□□ -1.01
ZNF28-205ENST00000464469 PZPP20742 1482 aa8.76□□□□□ -1.01
ZNF28-205ENST00000464469 STRCP1A6NGW2 1772 aa8.76□□□□□ -1.01
ZNF28-205ENST00000464469 REREQ9P2R6 1566 aa8.75□□□□□ -1.01
ZNF28-205ENST00000464469 MYO3AQ8NEV4 1616 aa8.75□□□□□ -1.01
ZNF28-205ENST00000464469 PRDM15P57071 1507 aaPredicted RBP8.75□□□□□ -1.01
ZNF28-205ENST00000464469 FAM135AQ9P2D6 1515 aa8.75□□□□□ -1.01
ZNF28-205ENST00000464469 NUP155O75694 1391 aa8.74□□□□□ -1.01
ZNF28-205ENST00000464469 SLC4A1APQ9BWU0 796 aaKnown RBP8.74□□□□□ -1.01
ZNF28-205ENST00000464469 ROBO1Q9Y6N7 1651 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms