RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CLTCQ00610 1675 aaKnown RBP26.03■■□□□ 1.76
VPS52-215ENST00000464425 PTPRKQ15262 1439 aa26.03■■□□□ 1.76
VPS52-215ENST00000464425 LMTK3Q96Q04 1460 aa25.99■■□□□ 1.75
VPS52-215ENST00000464425 HSPA2P54652 639 aa25.99■■□□□ 1.75
VPS52-215ENST00000464425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.98■■□□□ 1.75
VPS52-215ENST00000464425 ADGRL2O95490 1459 aa25.98■■□□□ 1.75
VPS52-215ENST00000464425 ERBINQ96RT1 1412 aa25.97■■□□□ 1.75
VPS52-215ENST00000464425 MROH2AA6NES4 1674 aa25.97■■□□□ 1.75
VPS52-215ENST00000464425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.97■■□□□ 1.754e-6■■□□□ 11.4
VPS52-215ENST00000464425 EIF2AK4Q9P2K8 1649 aaKnown RBP25.96■■□□□ 1.75
VPS52-215ENST00000464425 RRBP1Q9P2E9 1410 aaKnown RBP25.96■■□□□ 1.75
VPS52-215ENST00000464425 KDM5DQ9BY66 1539 aa25.94■■□□□ 1.74
VPS52-215ENST00000464425 RNF17Q9BXT8 1623 aaKnown RBP25.94■■□□□ 1.74
VPS52-215ENST00000464425 SETD1BQ9UPS6 1966 aaKnown RBP25.93■■□□□ 1.74
VPS52-215ENST00000464425 FBXO31Q5XUX0 539 aaPredicted RBP25.92■■□□□ 1.74
VPS52-215ENST00000464425 NPATQ14207 1427 aa25.91■■□□□ 1.74
VPS52-215ENST00000464425 UHRF1BP1Q6BDS2 1440 aa25.91■■□□□ 1.74
VPS52-215ENST00000464425 ANKRD50Q9ULJ7 1429 aa25.89■■□□□ 1.74
VPS52-215ENST00000464425 MROH1Q8NDA8 1641 aa25.89■■□□□ 1.74
VPS52-215ENST00000464425 ROCK1Q13464 1354 aa25.89■■□□□ 1.74
VPS52-215ENST00000464425 PREX1Q8TCU6 1659 aa25.89■■□□□ 1.73
VPS52-215ENST00000464425 ABCC3O15438 1527 aa25.88■■□□□ 1.73
VPS52-215ENST00000464425 FAM135AQ9P2D6 1515 aa25.88■■□□□ 1.73
VPS52-215ENST00000464425 PZPP20742 1482 aa25.85■■□□□ 1.73
VPS52-215ENST00000464425 KANK1Q14678 1352 aa25.84■■□□□ 1.73
VPS52-215ENST00000464425 PRDM15P57071 1507 aaPredicted RBP25.82■■□□□ 1.72
VPS52-215ENST00000464425 CEP152O94986 1710 aa25.8■■□□□ 1.72
VPS52-215ENST00000464425 DEPDC5O75140 1603 aa25.8■■□□□ 1.72
VPS52-215ENST00000464425 ZC3H13Q5T200 1668 aaKnown RBP25.8■■□□□ 1.72
VPS52-215ENST00000464425 TNRQ92752 1358 aa25.8■■□□□ 1.72
VPS52-215ENST00000464425 CAMSAP1Q5T5Y3 1602 aa25.75■■□□□ 1.71
VPS52-215ENST00000464425 MYO3AQ8NEV4 1616 aa25.74■■□□□ 1.71
VPS52-215ENST00000464425 VWDEQ8N2E2 1590 aa25.73■■□□□ 1.71
VPS52-215ENST00000464425 CFAP65Q6ZU64 1925 aaKnown RBP25.72■■□□□ 1.71
VPS52-215ENST00000464425 ERVK-7P63135 1459 aa25.71■■□□□ 1.71
VPS52-215ENST00000464425 ARHGAP31Q2M1Z3 1444 aa25.71■■□□□ 1.71
VPS52-215ENST00000464425 CEP170BQ9Y4F5 1589 aaPredicted RBP25.7■■□□□ 1.71
VPS52-215ENST00000464425 LMTK2Q8IWU2 1503 aa25.69■■□□□ 1.7
VPS52-215ENST00000464425 A2ML1A8K2U0 1454 aa25.69■■□□□ 1.7
VPS52-215ENST00000464425 SPATA31D1Q6ZQQ2 1576 aa25.68■■□□□ 1.7
VPS52-215ENST00000464425 NAIPQ13075 1403 aa25.67■■□□□ 1.7
VPS52-215ENST00000464425 NUP155O75694 1391 aa25.67■■□□□ 1.7
VPS52-215ENST00000464425 UNC13BO14795 1591 aa25.65■■□□□ 1.7
VPS52-215ENST00000464425 ZNF142P52746 1687 aaPredicted RBP25.65■■□□□ 1.7
VPS52-215ENST00000464425 NLRP1Q9C000 1473 aa25.65■■□□□ 1.7
VPS52-215ENST00000464425 NCKAP5LQ9HCH0 1330 aa25.64■■□□□ 1.7
VPS52-215ENST00000464425 DMRT2Q9Y5R5 561 aa25.63■■□□□ 1.69
VPS52-215ENST00000464425 STRCQ7RTU9 1775 aa25.63■■□□□ 1.69
VPS52-215ENST00000464425 EFCAB6Q5THR3 1501 aa25.62■■□□□ 1.69
VPS52-215ENST00000464425 THEMISQ8N1K5 641 aaPredicted RBP25.61■■□□□ 1.69
VPS52-215ENST00000464425 HFM1A2PYH4 1435 aa25.61■■□□□ 1.69
VPS52-215ENST00000464425 UGGT1Q9NYU2 1555 aa25.58■■□□□ 1.69
VPS52-215ENST00000464425 PKD2Q13563 968 aa25.57■■□□□ 1.68
VPS52-215ENST00000464425 TRIM52Q96A61 297 aa25.57■■□□□ 1.68
VPS52-215ENST00000464425 TET3O43151 1660 aa25.57■■□□□ 1.68
VPS52-215ENST00000464425 GCC2Q8IWJ2 1684 aa25.56■■□□□ 1.68
VPS52-215ENST00000464425 PLA2R1Q13018 1463 aa25.56■■□□□ 1.68
VPS52-215ENST00000464425 IQGAP3Q86VI3 1631 aa25.55■■□□□ 1.68
VPS52-215ENST00000464425 NOS1P29475 1434 aa25.55■■□□□ 1.68
VPS52-215ENST00000464425 IDI1Q13907 227 aa25.55■■□□□ 1.68
VPS52-215ENST00000464425 RPRD2Q5VT52 1461 aaKnown RBP25.54■■□□□ 1.68
VPS52-215ENST00000464425 STAG3Q9UJ98 1225 aa25.54■■□□□ 1.68
VPS52-215ENST00000464425 ANKLE2Q86XL3 938 aa25.52■■□□□ 1.68
VPS52-215ENST00000464425 PTPRTO14522 1441 aa25.52■■□□□ 1.68
VPS52-215ENST00000464425 SYNMO15061 1565 aa25.51■■□□□ 1.67
VPS52-215ENST00000464425 SLC52A1Q9NWF4 448 aa25.5■■□□□ 1.67
VPS52-215ENST00000464425 E9PCH4 1651 aa25.48■■□□□ 1.67
VPS52-215ENST00000464425 PIK3C2BO00750 1634 aa25.46■■□□□ 1.67
VPS52-215ENST00000464425 UBR1Q8IWV7 1749 aa25.46■■□□□ 1.67
VPS52-215ENST00000464425 SLC4A1APQ9BWU0 796 aaKnown RBP25.43■■□□□ 1.66
VPS52-215ENST00000464425 CHGAP10645 457 aaKnown RBP25.42■■□□□ 1.66
VPS52-215ENST00000464425 TXNDC2Q86VQ3 553 aa25.42■■□□□ 1.66
VPS52-215ENST00000464425 SETD5Q9C0A6 1442 aa25.42■■□□□ 1.66
VPS52-215ENST00000464425 LTKP29376 864 aa25.41■■□□□ 1.66
VPS52-215ENST00000464425 EID1Q9Y6B2 187 aa25.39■■□□□ 1.66
VPS52-215ENST00000464425 TMEM2Q9UHN6 1383 aa25.39■■□□□ 1.65
VPS52-215ENST00000464425 NEURL4Q96JN8 1562 aa25.39■■□□□ 1.65
VPS52-215ENST00000464425 POLR1AO95602 1720 aaPredicted RBP25.38■■□□□ 1.65
VPS52-215ENST00000464425 NPHP4O75161 1426 aaPredicted RBP25.37■■□□□ 1.65
VPS52-215ENST00000464425 ARHGAP23Q9P227 1491 aa25.37■■□□□ 1.65
VPS52-215ENST00000464425 ZNF335Q9H4Z2 1342 aaPredicted RBP25.37■■□□□ 1.65
VPS52-215ENST00000464425 CERKQ8TCT0 537 aa25.36■■□□□ 1.65
VPS52-215ENST00000464425 ADGRB3O60242 1522 aa25.36■■□□□ 1.65
VPS52-215ENST00000464425 SLIT1O75093 1534 aa25.36■■□□□ 1.65
VPS52-215ENST00000464425 SCAF11Q99590 1463 aaKnown RBP25.35■■□□□ 1.65
VPS52-215ENST00000464425 MED14O60244 1454 aa25.34■■□□□ 1.65
VPS52-215ENST00000464425 RAB3GAP2Q9H2M9 1393 aa25.34■■□□□ 1.65
VPS52-215ENST00000464425 FOXD1Q16676 465 aa25.34■■□□□ 1.65
VPS52-215ENST00000464425 MPHOSPH9Q99550 1183 aa25.34■■□□□ 1.65
VPS52-215ENST00000464425 KDM5AP29375 1690 aaKnown RBP25.32■■□□□ 1.64
VPS52-215ENST00000464425 SPHKAPQ2M3C7 1700 aa25.3■■□□□ 1.64
VPS52-215ENST00000464425 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
VPS52-215ENST00000464425 TRIM26Q12899 539 aaPredicted RBP25.29■■□□□ 1.64
VPS52-215ENST00000464425 TMEM131LA2VDJ0 1609 aa25.29■■□□□ 1.64
VPS52-215ENST00000464425 IQGAP1P46940 1657 aa25.28■■□□□ 1.64
VPS52-215ENST00000464425 ACIN1Q9UKV3 1341 aaKnown RBP25.28■■□□□ 1.64
VPS52-215ENST00000464425 LTBP4Q8N2S1 1624 aa25.27■■□□□ 1.64
VPS52-215ENST00000464425 NUTM2DQ5VT03 806 aaPredicted RBP25.27■■□□□ 1.64
VPS52-215ENST00000464425 ILDR1Q86SU0 546 aaPredicted RBP25.27■■□□□ 1.64
VPS52-215ENST00000464425 MYO5BQ9ULV0 1848 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms