RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 WASHC2CQ9Y4E1 1318 aa20.48■□□□□ 0.87
CTDSP1-206ENST00000464255 PTPN23Q9H3S7 1636 aa20.47■□□□□ 0.87
CTDSP1-206ENST00000464255 PTPRTO14522 1441 aa20.46■□□□□ 0.87
CTDSP1-206ENST00000464255 CERKQ8TCT0 537 aa20.46■□□□□ 0.87
CTDSP1-206ENST00000464255 KDM5DQ9BY66 1539 aa20.46■□□□□ 0.87
CTDSP1-206ENST00000464255 FAM135AQ9P2D6 1515 aa20.45■□□□□ 0.86
CTDSP1-206ENST00000464255 CAMSAP1Q5T5Y3 1602 aa20.44■□□□□ 0.86
CTDSP1-206ENST00000464255 MYO3AQ8NEV4 1616 aa20.44■□□□□ 0.86
CTDSP1-206ENST00000464255 PZPP20742 1482 aa20.43■□□□□ 0.86
CTDSP1-206ENST00000464255 SHANK2Q9UPX8 1470 aa20.43■□□□□ 0.86
CTDSP1-206ENST00000464255 RNF17Q9BXT8 1623 aaKnown RBP20.43■□□□□ 0.86
CTDSP1-206ENST00000464255 NCKAP5LQ9HCH0 1330 aa20.43■□□□□ 0.86
CTDSP1-206ENST00000464255 DAPK1P53355 1430 aa20.43■□□□□ 0.86
CTDSP1-206ENST00000464255 ZNF142P52746 1687 aaPredicted RBP20.42■□□□□ 0.86
CTDSP1-206ENST00000464255 CEP170BQ9Y4F5 1589 aaPredicted RBP20.42■□□□□ 0.86
CTDSP1-206ENST00000464255 MROH1Q8NDA8 1641 aa20.42■□□□□ 0.86
CTDSP1-206ENST00000464255 RRP7BPQ9NSQ0 103 aa20.41■□□□□ 0.86
CTDSP1-206ENST00000464255 KIF15Q9NS87 1388 aa20.41■□□□□ 0.86
CTDSP1-206ENST00000464255 DUOX2Q9NRD8 1548 aa20.41■□□□□ 0.86
CTDSP1-206ENST00000464255 ABCC3O15438 1527 aa20.4■□□□□ 0.86
CTDSP1-206ENST00000464255 TNRQ92752 1358 aa20.4■□□□□ 0.86
CTDSP1-206ENST00000464255 CROCC2H7BZ55 1655 aa20.39■□□□□ 0.86
CTDSP1-206ENST00000464255 DNMT1P26358 1616 aaKnown RBP20.39■□□□□ 0.86
CTDSP1-206ENST00000464255 EIF2AK4Q9P2K8 1649 aaKnown RBP20.39■□□□□ 0.86
CTDSP1-206ENST00000464255 A2ML1A8K2U0 1454 aa20.39■□□□□ 0.85
CTDSP1-206ENST00000464255 PLA2R1Q13018 1463 aa20.37■□□□□ 0.85
CTDSP1-206ENST00000464255 CHIC2Q9UKJ5 165 aa20.36■□□□□ 0.85
CTDSP1-206ENST00000464255 PKD2Q13563 968 aa20.35■□□□□ 0.85
CTDSP1-206ENST00000464255 ERBINQ96RT1 1412 aa20.35■□□□□ 0.85
CTDSP1-206ENST00000464255 LTBP4Q8N2S1 1624 aa20.35■□□□□ 0.85
CTDSP1-206ENST00000464255 ANKRD30AQ9BXX3 1397 aa20.32■□□□□ 0.84
CTDSP1-206ENST00000464255 ZC3H13Q5T200 1668 aaKnown RBP20.3■□□□□ 0.84
CTDSP1-206ENST00000464255 FAM50AQ14320 339 aaKnown RBP20.3■□□□□ 0.84
CTDSP1-206ENST00000464255 PRDM15P57071 1507 aaPredicted RBP20.3■□□□□ 0.84
CTDSP1-206ENST00000464255 NLRP1Q9C000 1473 aa20.3■□□□□ 0.84
CTDSP1-206ENST00000464255 SPATA31D1Q6ZQQ2 1576 aa20.29■□□□□ 0.84
CTDSP1-206ENST00000464255 ADGRL2O95490 1459 aa20.29■□□□□ 0.84
CTDSP1-206ENST00000464255 ERVK-7P63135 1459 aa20.29■□□□□ 0.84
CTDSP1-206ENST00000464255 ZNF335Q9H4Z2 1342 aaPredicted RBP20.27■□□□□ 0.84
CTDSP1-206ENST00000464255 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.84
CTDSP1-206ENST00000464255 DEPDC5O75140 1603 aa20.27■□□□□ 0.84
CTDSP1-206ENST00000464255 CEP152O94986 1710 aa20.27■□□□□ 0.84
CTDSP1-206ENST00000464255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.27■□□□□ 0.847e-9■■■■■ 61
CTDSP1-206ENST00000464255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.27■□□□□ 0.844e-17■□□□□ 10.2
CTDSP1-206ENST00000464255 THEMISQ8N1K5 641 aaPredicted RBP20.26■□□□□ 0.83
CTDSP1-206ENST00000464255 VWDEQ8N2E2 1590 aa20.25■□□□□ 0.83
CTDSP1-206ENST00000464255 NEURL4Q96JN8 1562 aa20.25■□□□□ 0.83
CTDSP1-206ENST00000464255 PPARGC1BQ86YN6 1023 aaKnown RBP20.24■□□□□ 0.83
CTDSP1-206ENST00000464255 UGGT1Q9NYU2 1555 aa20.24■□□□□ 0.83
CTDSP1-206ENST00000464255 CFAP65Q6ZU64 1925 aaKnown RBP20.23■□□□□ 0.83
CTDSP1-206ENST00000464255 ANKLE2Q86XL3 938 aa20.22■□□□□ 0.83
CTDSP1-206ENST00000464255 LMTK2Q8IWU2 1503 aa20.21■□□□□ 0.83
CTDSP1-206ENST00000464255 MED14O60244 1454 aa20.19■□□□□ 0.82
CTDSP1-206ENST00000464255 KANK1Q14678 1352 aa20.19■□□□□ 0.82
CTDSP1-206ENST00000464255 ANKRD50Q9ULJ7 1429 aa20.19■□□□□ 0.82
CTDSP1-206ENST00000464255 IQSEC2Q5JU85 1478 aa20.18■□□□□ 0.82
CTDSP1-206ENST00000464255 POLR1AO95602 1720 aaPredicted RBP20.17■□□□□ 0.82
CTDSP1-206ENST00000464255 ROCK1Q13464 1354 aa20.15■□□□□ 0.82
CTDSP1-206ENST00000464255 NPHP4O75161 1426 aaPredicted RBP20.15■□□□□ 0.82
CTDSP1-206ENST00000464255 UBR1Q8IWV7 1749 aa20.14■□□□□ 0.81
CTDSP1-206ENST00000464255 LTKP29376 864 aa20.14■□□□□ 0.81
CTDSP1-206ENST00000464255 IDI1Q13907 227 aa20.13■□□□□ 0.81
CTDSP1-206ENST00000464255 ARHGAP23Q9P227 1491 aa20.12■□□□□ 0.81
CTDSP1-206ENST00000464255 NOS1P29475 1434 aa20.12■□□□□ 0.81
CTDSP1-206ENST00000464255 EFCAB6Q5THR3 1501 aa20.12■□□□□ 0.81
CTDSP1-206ENST00000464255 SYNMO15061 1565 aa20.1■□□□□ 0.81
CTDSP1-206ENST00000464255 SLIT1O75093 1534 aa20.1■□□□□ 0.81
CTDSP1-206ENST00000464255 ITGAEP38570 1179 aa20.08■□□□□ 0.81
CTDSP1-206ENST00000464255 PIK3C2BO00750 1634 aa20.08■□□□□ 0.8
CTDSP1-206ENST00000464255 TXNDC2Q86VQ3 553 aa20.07■□□□□ 0.8
CTDSP1-206ENST00000464255 TMEM2Q9UHN6 1383 aa20.07■□□□□ 0.8
CTDSP1-206ENST00000464255 IQGAP1P46940 1657 aa20.07■□□□□ 0.8
CTDSP1-206ENST00000464255 SCAF11Q99590 1463 aaKnown RBP20.06■□□□□ 0.8
CTDSP1-206ENST00000464255 UNC13BO14795 1591 aa20.05■□□□□ 0.8
CTDSP1-206ENST00000464255 RPRD2Q5VT52 1461 aaKnown RBP20.05■□□□□ 0.8
CTDSP1-206ENST00000464255 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
CTDSP1-206ENST00000464255 CPS1P31327 1500 aa20.04■□□□□ 0.8
CTDSP1-206ENST00000464255 UBAP1LF5GYI3 381 aa20.04■□□□□ 0.8
CTDSP1-206ENST00000464255 SLC52A1Q9NWF4 448 aa20.04■□□□□ 0.8
CTDSP1-206ENST00000464255 TET3O43151 1660 aa20.02■□□□□ 0.8
CTDSP1-206ENST00000464255 STRCP1A6NGW2 1772 aa20.01■□□□□ 0.79
CTDSP1-206ENST00000464255 KDM5AP29375 1690 aaKnown RBP20.01■□□□□ 0.79
CTDSP1-206ENST00000464255 STAG3Q9UJ98 1225 aa20■□□□□ 0.79
CTDSP1-206ENST00000464255 EID1Q9Y6B2 187 aa20■□□□□ 0.79
CTDSP1-206ENST00000464255 NUP155O75694 1391 aa19.98■□□□□ 0.79
CTDSP1-206ENST00000464255 ADGRB3O60242 1522 aa19.97■□□□□ 0.79
CTDSP1-206ENST00000464255 IQGAP3Q86VI3 1631 aa19.97■□□□□ 0.79
CTDSP1-206ENST00000464255 GCC2Q8IWJ2 1684 aa19.97■□□□□ 0.79
CTDSP1-206ENST00000464255 LRRC7Q96NW7 1537 aa19.97■□□□□ 0.79
CTDSP1-206ENST00000464255 ALKQ9UM73 1620 aa19.96■□□□□ 0.79
CTDSP1-206ENST00000464255 E9PCH4 1651 aa19.96■□□□□ 0.79
CTDSP1-206ENST00000464255 ZFYVE9O95405 1425 aa19.93■□□□□ 0.78
CTDSP1-206ENST00000464255 NAIPQ13075 1403 aa19.93■□□□□ 0.78
CTDSP1-206ENST00000464255 TMEM131LA2VDJ0 1609 aa19.92■□□□□ 0.78
CTDSP1-206ENST00000464255 SLC26A8Q96RN1 970 aa19.92■□□□□ 0.78
CTDSP1-206ENST00000464255 TOM1O60784 492 aa19.91■□□□□ 0.78
CTDSP1-206ENST00000464255 PIP4K2BP78356 416 aa19.89■□□□□ 0.77
CTDSP1-206ENST00000464255 MYO5BQ9ULV0 1848 aa19.89■□□□□ 0.77
CTDSP1-206ENST00000464255 RIMS2Q9UQ26 1411 aa19.88■□□□□ 0.77
CTDSP1-206ENST00000464255 KCNA6P17658 529 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms