RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 ESF1Q9H501 851 aaKnown RBP28.63■■■□□ 2.17
LMNB1-204ENST00000463908 RIMS1Q86UR5 1692 aaKnown RBP28.63■■■□□ 2.17
LMNB1-204ENST00000463908 CEBPAP49715 358 aaPredicted RBP28.62■■■□□ 2.17
LMNB1-204ENST00000463908 FER1L4A9Z1Z3 1794 aa28.62■■■□□ 2.17
LMNB1-204ENST00000463908 RNF17Q9BXT8 1623 aaKnown RBP28.6■■■□□ 2.17
LMNB1-204ENST00000463908 NAIPQ13075 1403 aa28.59■■■□□ 2.17
LMNB1-204ENST00000463908 MROH1Q8NDA8 1641 aa28.58■■■□□ 2.17
LMNB1-204ENST00000463908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.58■■■□□ 2.179e-7■■□□□ 14.3
LMNB1-204ENST00000463908 WASHC2CQ9Y4E1 1318 aa28.58■■■□□ 2.17
LMNB1-204ENST00000463908 PLPPR3Q6T4P5 718 aa28.57■■■□□ 2.16
LMNB1-204ENST00000463908 ZMYM3Q14202 1370 aa28.57■■■□□ 2.16
LMNB1-204ENST00000463908 CNTLNQ9NXG0 1405 aa28.57■■■□□ 2.16
LMNB1-204ENST00000463908 HFM1A2PYH4 1435 aa28.54■■■□□ 2.16
LMNB1-204ENST00000463908 CLTCQ00610 1675 aaKnown RBP28.53■■■□□ 2.16
LMNB1-204ENST00000463908 LMTK3Q96Q04 1460 aa28.53■■■□□ 2.16
LMNB1-204ENST00000463908 DEPDC5O75140 1603 aa28.52■■■□□ 2.16
LMNB1-204ENST00000463908 FBXO41Q8TF61 875 aa28.52■■■□□ 2.16
LMNB1-204ENST00000463908 PRDM15P57071 1507 aaPredicted RBP28.5■■■□□ 2.15
LMNB1-204ENST00000463908 ABCC3O15438 1527 aa28.49■■■□□ 2.15
LMNB1-204ENST00000463908 KDM5DQ9BY66 1539 aa28.49■■■□□ 2.15
LMNB1-204ENST00000463908 FAM135AQ9P2D6 1515 aa28.48■■■□□ 2.15
LMNB1-204ENST00000463908 VWDEQ8N2E2 1590 aa28.46■■■□□ 2.15
LMNB1-204ENST00000463908 MROH2AA6NES4 1674 aa28.46■■■□□ 2.15
LMNB1-204ENST00000463908 C3P01024 1663 aa28.46■■■□□ 2.15
LMNB1-204ENST00000463908 KANK1Q14678 1352 aa28.46■■■□□ 2.15
LMNB1-204ENST00000463908 GCC2Q8IWJ2 1684 aa28.45■■■□□ 2.14
LMNB1-204ENST00000463908 FBXO31Q5XUX0 539 aaPredicted RBP28.43■■■□□ 2.14
LMNB1-204ENST00000463908 UNC13BO14795 1591 aa28.42■■■□□ 2.14
LMNB1-204ENST00000463908 NUP155O75694 1391 aa28.41■■■□□ 2.14
LMNB1-204ENST00000463908 CEP152O94986 1710 aa28.4■■■□□ 2.14
LMNB1-204ENST00000463908 LMTK2Q8IWU2 1503 aa28.39■■■□□ 2.14
LMNB1-204ENST00000463908 ZC3H13Q5T200 1668 aaKnown RBP28.39■■■□□ 2.14
LMNB1-204ENST00000463908 SETD5Q9C0A6 1442 aa28.38■■■□□ 2.13
LMNB1-204ENST00000463908 PZPP20742 1482 aa28.37■■■□□ 2.13
LMNB1-204ENST00000463908 NPATQ14207 1427 aa28.35■■■□□ 2.13
LMNB1-204ENST00000463908 ARHGAP31Q2M1Z3 1444 aa28.35■■■□□ 2.13
LMNB1-204ENST00000463908 TRIM26Q12899 539 aaPredicted RBP28.35■■■□□ 2.13
LMNB1-204ENST00000463908 CAMSAP1Q5T5Y3 1602 aa28.35■■■□□ 2.13
LMNB1-204ENST00000463908 TRIM52Q96A61 297 aa28.33■■■□□ 2.13
LMNB1-204ENST00000463908 IQGAP3Q86VI3 1631 aa28.3■■■□□ 2.12
LMNB1-204ENST00000463908 RAB3GAP2Q9H2M9 1393 aa28.3■■■□□ 2.12
LMNB1-204ENST00000463908 EFCAB6Q5THR3 1501 aa28.28■■■□□ 2.12
LMNB1-204ENST00000463908 SETD1BQ9UPS6 1966 aaKnown RBP28.26■■■□□ 2.11
LMNB1-204ENST00000463908 ERVK-7P63135 1459 aa28.26■■■□□ 2.11
LMNB1-204ENST00000463908 TET3O43151 1660 aa28.26■■■□□ 2.11
LMNB1-204ENST00000463908 TNRQ92752 1358 aa28.25■■■□□ 2.11
LMNB1-204ENST00000463908 HSPA2P54652 639 aa28.25■■■□□ 2.11
LMNB1-204ENST00000463908 HRCP23327 699 aa28.24■■■□□ 2.11
LMNB1-204ENST00000463908 SPATA31D1Q6ZQQ2 1576 aa28.24■■■□□ 2.11
LMNB1-204ENST00000463908 PREX1Q8TCU6 1659 aa28.23■■■□□ 2.11
LMNB1-204ENST00000463908 CFAP65Q6ZU64 1925 aaKnown RBP28.22■■■□□ 2.11
LMNB1-204ENST00000463908 UHRF1BP1Q6BDS2 1440 aa28.21■■■□□ 2.11
LMNB1-204ENST00000463908 NOS1P29475 1434 aa28.2■■■□□ 2.11
LMNB1-204ENST00000463908 SLC4A1APQ9BWU0 796 aaKnown RBP28.2■■■□□ 2.1
LMNB1-204ENST00000463908 RPRD2Q5VT52 1461 aaKnown RBP28.2■■■□□ 2.1
LMNB1-204ENST00000463908 E9PCH4 1651 aa28.19■■■□□ 2.1
LMNB1-204ENST00000463908 ACIN1Q9UKV3 1341 aaKnown RBP28.18■■■□□ 2.1
LMNB1-204ENST00000463908 MPHOSPH9Q99550 1183 aa28.18■■■□□ 2.1
LMNB1-204ENST00000463908 PKD2Q13563 968 aa28.17■■■□□ 2.1
LMNB1-204ENST00000463908 IDI1Q13907 227 aa28.14■■■□□ 2.1
LMNB1-204ENST00000463908 MYO3AQ8NEV4 1616 aa28.14■■■□□ 2.09
LMNB1-204ENST00000463908 SYNMO15061 1565 aa28.12■■■□□ 2.09
LMNB1-204ENST00000463908 A2ML1A8K2U0 1454 aa28.12■■■□□ 2.09
LMNB1-204ENST00000463908 NLRP1Q9C000 1473 aa28.12■■■□□ 2.09
LMNB1-204ENST00000463908 FOXD1Q16676 465 aa28.11■■■□□ 2.09
LMNB1-204ENST00000463908 PTPRTO14522 1441 aa28.09■■■□□ 2.09
LMNB1-204ENST00000463908 CEP170BQ9Y4F5 1589 aaPredicted RBP28.09■■■□□ 2.09
LMNB1-204ENST00000463908 SLC52A1Q9NWF4 448 aa28.09■■■□□ 2.09
LMNB1-204ENST00000463908 STRCQ7RTU9 1775 aa28.09■■■□□ 2.09
LMNB1-204ENST00000463908 PLA2R1Q13018 1463 aa28.06■■■□□ 2.08
LMNB1-204ENST00000463908 ZNF142P52746 1687 aaPredicted RBP28.05■■■□□ 2.08
LMNB1-204ENST00000463908 THEMISQ8N1K5 641 aaPredicted RBP28.03■■■□□ 2.08
LMNB1-204ENST00000463908 CERKQ8TCT0 537 aa28.03■■■□□ 2.08
LMNB1-204ENST00000463908 UGGT1Q9NYU2 1555 aa28.02■■■□□ 2.08
LMNB1-204ENST00000463908 PCGF6Q9BYE7 350 aa28■■■□□ 2.07
LMNB1-204ENST00000463908 PIK3C2BO00750 1634 aa28■■■□□ 2.07
LMNB1-204ENST00000463908 SPHKAPQ2M3C7 1700 aa27.97■■■□□ 2.07
LMNB1-204ENST00000463908 STAG3Q9UJ98 1225 aa27.96■■■□□ 2.07
LMNB1-204ENST00000463908 UBR1Q8IWV7 1749 aa27.95■■■□□ 2.07
LMNB1-204ENST00000463908 NCKAP5LQ9HCH0 1330 aa27.94■■■□□ 2.06
LMNB1-204ENST00000463908 TRPM2O94759 1503 aa27.94■■■□□ 2.06
LMNB1-204ENST00000463908 CHGAP10645 457 aaKnown RBP27.92■■■□□ 2.06
LMNB1-204ENST00000463908 TMEM131LA2VDJ0 1609 aa27.89■■■□□ 2.06
LMNB1-204ENST00000463908 CLTCL1P53675 1640 aa27.89■■■□□ 2.06
LMNB1-204ENST00000463908 ADGRB3O60242 1522 aa27.89■■■□□ 2.06
LMNB1-204ENST00000463908 LTKP29376 864 aa27.89■■■□□ 2.06
LMNB1-204ENST00000463908 ANKLE2Q86XL3 938 aa27.89■■■□□ 2.06
LMNB1-204ENST00000463908 ANKRD30BQ9BXX2 1392 aa27.88■■■□□ 2.05
LMNB1-204ENST00000463908 TMEM2Q9UHN6 1383 aa27.88■■■□□ 2.05
LMNB1-204ENST00000463908 KDM5AP29375 1690 aaKnown RBP27.88■■■□□ 2.05
LMNB1-204ENST00000463908 ARHGAP23Q9P227 1491 aa27.88■■■□□ 2.05
LMNB1-204ENST00000463908 SLIT1O75093 1534 aa27.86■■■□□ 2.05
LMNB1-204ENST00000463908 TXNDC2Q86VQ3 553 aa27.85■■■□□ 2.05
LMNB1-204ENST00000463908 CCDC144AA2RUR9 1427 aa27.82■■■□□ 2.04
LMNB1-204ENST00000463908 MYO5BQ9ULV0 1848 aa27.81■■■□□ 2.04
LMNB1-204ENST00000463908 DMRT2Q9Y5R5 561 aa27.81■■■□□ 2.04
LMNB1-204ENST00000463908 DHX57Q6P158 1386 aaKnown RBP27.8■■■□□ 2.04
LMNB1-204ENST00000463908 ZFYVE9O95405 1425 aa27.79■■■□□ 2.04
LMNB1-204ENST00000463908 EID1Q9Y6B2 187 aa27.79■■■□□ 2.04
LMNB1-204ENST00000463908 RIMS2Q9UQ26 1411 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms