RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 ARID4BQ4LE39 1312 aaPredicted RBP22.22■■□□□ 1.15
ABCF3-204ENST00000463685 NUP155O75694 1391 aa22.22■■□□□ 1.15
ABCF3-204ENST00000463685 AGLP35573 1532 aa22.21■■□□□ 1.15
ABCF3-204ENST00000463685 MLECQ14165 292 aa22.2■■□□□ 1.14
ABCF3-204ENST00000463685 MROH1Q8NDA8 1641 aa22.2■■□□□ 1.14
ABCF3-204ENST00000463685 RNF17Q9BXT8 1623 aaKnown RBP22.2■■□□□ 1.14
ABCF3-204ENST00000463685 BCORL1Q5H9F3 1711 aa22.2■■□□□ 1.14
ABCF3-204ENST00000463685 DEPDC5O75140 1603 aa22.19■■□□□ 1.14
ABCF3-204ENST00000463685 PZPP20742 1482 aa22.18■■□□□ 1.14
ABCF3-204ENST00000463685 DHX57Q6P158 1386 aaKnown RBP22.16■■□□□ 1.14
ABCF3-204ENST00000463685 MPHOSPH9Q99550 1183 aa22.15■■□□□ 1.14
ABCF3-204ENST00000463685 PRDM15P57071 1507 aaPredicted RBP22.15■■□□□ 1.14
ABCF3-204ENST00000463685 KDM5DQ9BY66 1539 aa22.15■■□□□ 1.14
ABCF3-204ENST00000463685 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.13
ABCF3-204ENST00000463685 KANK1Q14678 1352 aa22.13■■□□□ 1.13
ABCF3-204ENST00000463685 FAM135AQ9P2D6 1515 aa22.13■■□□□ 1.13
ABCF3-204ENST00000463685 IQGAP3Q86VI3 1631 aa22.13■■□□□ 1.13
ABCF3-204ENST00000463685 VWDEQ8N2E2 1590 aa22.12■■□□□ 1.13
ABCF3-204ENST00000463685 ACIN1Q9UKV3 1341 aaKnown RBP22.11■■□□□ 1.13
ABCF3-204ENST00000463685 FOXD1Q16676 465 aa22.11■■□□□ 1.13
ABCF3-204ENST00000463685 CEP152O94986 1710 aa22.09■■□□□ 1.13
ABCF3-204ENST00000463685 CCER1Q8TC90 406 aaPredicted RBP22.09■■□□□ 1.13
ABCF3-204ENST00000463685 ABCC3O15438 1527 aa22.09■■□□□ 1.13
ABCF3-204ENST00000463685 WASHC2CQ9Y4E1 1318 aa22.08■■□□□ 1.13
ABCF3-204ENST00000463685 PKD2Q13563 968 aa22.08■■□□□ 1.13
ABCF3-204ENST00000463685 LMTK2Q8IWU2 1503 aa22.04■■□□□ 1.12
ABCF3-204ENST00000463685 TET3O43151 1660 aa22.03■■□□□ 1.12
ABCF3-204ENST00000463685 CLTCQ00610 1675 aaKnown RBP22.02■■□□□ 1.12
ABCF3-204ENST00000463685 PPP6R1Q9UPN7 881 aa22.01■■□□□ 1.11
ABCF3-204ENST00000463685 EFCAB6Q5THR3 1501 aa22.01■■□□□ 1.11
ABCF3-204ENST00000463685 CAMSAP1Q5T5Y3 1602 aa22■■□□□ 1.11
ABCF3-204ENST00000463685 ESF1Q9H501 851 aaKnown RBP22■■□□□ 1.11
ABCF3-204ENST00000463685 E9PCH4 1651 aa22■■□□□ 1.11
ABCF3-204ENST00000463685 ZC3H13Q5T200 1668 aaKnown RBP22■■□□□ 1.11
ABCF3-204ENST00000463685 FER1L4A9Z1Z3 1794 aa21.96■■□□□ 1.11
ABCF3-204ENST00000463685 NPATQ14207 1427 aa21.96■■□□□ 1.11
ABCF3-204ENST00000463685 MADDQ8WXG6 1647 aa21.95■■□□□ 1.1
ABCF3-204ENST00000463685 ANKRD30BQ9BXX2 1392 aa21.95■■□□□ 1.1
ABCF3-204ENST00000463685 ADAMTSL3P82987 1691 aa21.94■■□□□ 1.1
ABCF3-204ENST00000463685 CFAP65Q6ZU64 1925 aaKnown RBP21.94■■□□□ 1.1
ABCF3-204ENST00000463685 SIN3AQ96ST3 1273 aa21.93■■□□□ 1.1
ABCF3-204ENST00000463685 PLA2R1Q13018 1463 aa21.92■■□□□ 1.1
ABCF3-204ENST00000463685 CNTLNQ9NXG0 1405 aa21.92■■□□□ 1.1
ABCF3-204ENST00000463685 ZMYM3Q14202 1370 aa21.92■■□□□ 1.1
ABCF3-204ENST00000463685 FBXO31Q5XUX0 539 aaPredicted RBP21.92■■□□□ 1.1
ABCF3-204ENST00000463685 PLPPR3Q6T4P5 718 aa21.92■■□□□ 1.1
ABCF3-204ENST00000463685 ARHGAP31Q2M1Z3 1444 aa21.91■■□□□ 1.1
ABCF3-204ENST00000463685 RIMS1Q86UR5 1692 aaKnown RBP21.91■■□□□ 1.1
ABCF3-204ENST00000463685 CEBPAP49715 358 aaPredicted RBP21.9■■□□□ 1.1
ABCF3-204ENST00000463685 RPRD2Q5VT52 1461 aaKnown RBP21.89■■□□□ 1.09
ABCF3-204ENST00000463685 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
ABCF3-204ENST00000463685 MROH2AA6NES4 1674 aa21.88■■□□□ 1.09
ABCF3-204ENST00000463685 PTPRTO14522 1441 aa21.88■■□□□ 1.09
ABCF3-204ENST00000463685 SPHKAPQ2M3C7 1700 aa21.87■■□□□ 1.09
ABCF3-204ENST00000463685 CLSPNQ9HAW4 1339 aa21.86■■□□□ 1.09
ABCF3-204ENST00000463685 ERVK-7P63135 1459 aa21.86■■□□□ 1.09
ABCF3-204ENST00000463685 PREX1Q8TCU6 1659 aa21.85■■□□□ 1.09
ABCF3-204ENST00000463685 C3P01024 1663 aa21.85■■□□□ 1.09
ABCF3-204ENST00000463685 UGGT1Q9NYU2 1555 aa21.84■■□□□ 1.09
ABCF3-204ENST00000463685 NOS1P29475 1434 aa21.84■■□□□ 1.09
ABCF3-204ENST00000463685 TRPM2O94759 1503 aa21.84■■□□□ 1.09
ABCF3-204ENST00000463685 SYNMO15061 1565 aa21.83■■□□□ 1.09
ABCF3-204ENST00000463685 KDM4FA0A1W2PPD8 638 aa21.82■■□□□ 1.08
ABCF3-204ENST00000463685 CLTCL1P53675 1640 aa21.81■■□□□ 1.08
ABCF3-204ENST00000463685 CCDC144AA2RUR9 1427 aa21.8■■□□□ 1.08
ABCF3-204ENST00000463685 SPATA31D1Q6ZQQ2 1576 aa21.8■■□□□ 1.08
ABCF3-204ENST00000463685 PTPRMP28827 1452 aa21.77■■□□□ 1.08
ABCF3-204ENST00000463685 TNRQ92752 1358 aa21.77■■□□□ 1.08
ABCF3-204ENST00000463685 IDI1Q13907 227 aa21.75■■□□□ 1.07
ABCF3-204ENST00000463685 PIK3C2BO00750 1634 aa21.73■■□□□ 1.07
ABCF3-204ENST00000463685 CHGAP10645 457 aaKnown RBP21.73■■□□□ 1.07
ABCF3-204ENST00000463685 RGL3Q3MIN7 710 aa21.71■■□□□ 1.07
ABCF3-204ENST00000463685 SLC52A1Q9NWF4 448 aa21.71■■□□□ 1.07
ABCF3-204ENST00000463685 TONSLQ96HA7 1378 aa21.69■■□□□ 1.06
ABCF3-204ENST00000463685 SPATA31E1Q6ZUB1 1445 aa21.69■■□□□ 1.06
ABCF3-204ENST00000463685 KIF1BO60333 1816 aa21.67■■□□□ 1.06
ABCF3-204ENST00000463685 L3MBTL2Q969R5 705 aa21.67■■□□□ 1.06
ABCF3-204ENST00000463685 ADGRB3O60242 1522 aa21.65■■□□□ 1.06
ABCF3-204ENST00000463685 ZNF326Q5BKZ1 582 aaKnown RBP21.64■■□□□ 1.05
ABCF3-204ENST00000463685 STAG3Q9UJ98 1225 aa21.64■■□□□ 1.05
ABCF3-204ENST00000463685 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.05
ABCF3-204ENST00000463685 TMEM131LA2VDJ0 1609 aa21.63■■□□□ 1.05
ABCF3-204ENST00000463685 MYO3AQ8NEV4 1616 aa21.63■■□□□ 1.05
ABCF3-204ENST00000463685 NLRP1Q9C000 1473 aa21.63■■□□□ 1.05
ABCF3-204ENST00000463685 A2ML1A8K2U0 1454 aa21.6■■□□□ 1.05
ABCF3-204ENST00000463685 ZEB1P37275 1124 aaPredicted RBP21.6■■□□□ 1.05
ABCF3-204ENST00000463685 DCAF11Q8TEB1 546 aa21.6■■□□□ 1.05
ABCF3-204ENST00000463685 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
ABCF3-204ENST00000463685 SETD1BQ9UPS6 1966 aaKnown RBP21.58■■□□□ 1.05
ABCF3-204ENST00000463685 TIMELESSQ9UNS1 1208 aa21.58■■□□□ 1.05
ABCF3-204ENST00000463685 UBR1Q8IWV7 1749 aa21.58■■□□□ 1.04
ABCF3-204ENST00000463685 NEURL4Q96JN8 1562 aa21.57■■□□□ 1.04
ABCF3-204ENST00000463685 NUTM2DQ5VT03 806 aaPredicted RBP21.57■■□□□ 1.04
ABCF3-204ENST00000463685 CEP170BQ9Y4F5 1589 aaPredicted RBP21.57■■□□□ 1.04
ABCF3-204ENST00000463685 UHRF1BP1Q6BDS2 1440 aa21.55■■□□□ 1.04
ABCF3-204ENST00000463685 PPP1R15AO75807 674 aaPredicted RBP21.54■■□□□ 1.04
ABCF3-204ENST00000463685 NEXMIFQ5QGS0 1516 aa21.53■■□□□ 1.04
ABCF3-204ENST00000463685 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
ABCF3-204ENST00000463685 ZNF142P52746 1687 aaPredicted RBP21.52■■□□□ 1.04
ABCF3-204ENST00000463685 RIMS2Q9UQ26 1411 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms