RNA–Protein interactions for RNA: ENST00000463531.1

GRIN2A-204, Transcript of glutamate ionotropic receptor NMDA type subunit 2A, humanhuman

TSL 3

Gene GRIN2A, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2A-204ENST00000463531 ALKQ9UM73 1620 aa13.48□□□□□ -0.25
GRIN2A-204ENST00000463531 VWDEQ8N2E2 1590 aa13.47□□□□□ -0.25
GRIN2A-204ENST00000463531 CFDP1Q9UEE9 299 aaPredicted RBP13.47□□□□□ -0.25
GRIN2A-204ENST00000463531 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
GRIN2A-204ENST00000463531 TNRQ92752 1358 aa13.45□□□□□ -0.26
GRIN2A-204ENST00000463531 PZPP20742 1482 aa13.43□□□□□ -0.26
GRIN2A-204ENST00000463531 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
GRIN2A-204ENST00000463531 FBXO31Q5XUX0 539 aaPredicted RBP13.43□□□□□ -0.26
GRIN2A-204ENST00000463531 DEPDC5O75140 1603 aa13.42□□□□□ -0.26
GRIN2A-204ENST00000463531 IQGAP1P46940 1657 aa13.42□□□□□ -0.26
GRIN2A-204ENST00000463531 KDM5DQ9BY66 1539 aa13.42□□□□□ -0.26
GRIN2A-204ENST00000463531 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.42□□□□□ -0.26
GRIN2A-204ENST00000463531 MBD5Q9P267 1494 aa13.42□□□□□ -0.26
GRIN2A-204ENST00000463531 ZNF644Q9H582 1327 aaPredicted RBP13.41□□□□□ -0.26
GRIN2A-204ENST00000463531 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
GRIN2A-204ENST00000463531 LOC105371045A0A1W2PR82 267 aa13.41□□□□□ -0.26
GRIN2A-204ENST00000463531 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
GRIN2A-204ENST00000463531 DHX29Q7Z478 1369 aaKnown RBP13.41□□□□□ -0.26
GRIN2A-204ENST00000463531 MED14O60244 1454 aa13.41□□□□□ -0.26
GRIN2A-204ENST00000463531 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
GRIN2A-204ENST00000463531 NPHP4O75161 1426 aaPredicted RBP13.4□□□□□ -0.26
GRIN2A-204ENST00000463531 FAM135AQ9P2D6 1515 aa13.4□□□□□ -0.26
GRIN2A-204ENST00000463531 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
GRIN2A-204ENST00000463531 RNF17Q9BXT8 1623 aaKnown RBP13.39□□□□□ -0.27
GRIN2A-204ENST00000463531 FOXD1Q16676 465 aa13.39□□□□□ -0.27
GRIN2A-204ENST00000463531 SYNMO15061 1565 aa13.38□□□□□ -0.27
GRIN2A-204ENST00000463531 NLRP1Q9C000 1473 aa13.38□□□□□ -0.27
GRIN2A-204ENST00000463531 MTUS2Q5JR59 1369 aa13.38□□□□□ -0.27
GRIN2A-204ENST00000463531 KIF3BO15066 747 aa13.38□□□□□ -0.27
GRIN2A-204ENST00000463531 THEMISQ8N1K5 641 aaPredicted RBP13.37□□□□□ -0.27
GRIN2A-204ENST00000463531 LRRC7Q96NW7 1537 aa13.37□□□□□ -0.27
GRIN2A-204ENST00000463531 MIA2Q96PC5 1412 aa13.37□□□□□ -0.27
GRIN2A-204ENST00000463531 WASHC2CQ9Y4E1 1318 aa13.36□□□□□ -0.27
GRIN2A-204ENST00000463531 ZC3H13Q5T200 1668 aaKnown RBP13.34□□□□□ -0.27
GRIN2A-204ENST00000463531 CCDC141Q6ZP82 1450 aa13.34□□□□□ -0.27
GRIN2A-204ENST00000463531 EHBP1L1Q8N3D4 1523 aa13.34□□□□□ -0.27
GRIN2A-204ENST00000463531 RGS17Q9UGC6 210 aaPredicted RBP13.33□□□□□ -0.28
GRIN2A-204ENST00000463531 XIRP1Q702N8 1843 aaKnown RBP13.33□□□□□ -0.28
GRIN2A-204ENST00000463531 CFAP65Q6ZU64 1925 aaKnown RBP13.33□□□□□ -0.28
GRIN2A-204ENST00000463531 CEP162Q5TB80 1403 aa13.3□□□□□ -0.28
GRIN2A-204ENST00000463531 UBR1Q8IWV7 1749 aa13.3□□□□□ -0.28
GRIN2A-204ENST00000463531 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
GRIN2A-204ENST00000463531 ABCC3O15438 1527 aa13.29□□□□□ -0.28
GRIN2A-204ENST00000463531 ERVK-7P63135 1459 aa13.28□□□□□ -0.28
GRIN2A-204ENST00000463531 CEP152O94986 1710 aa13.27□□□□□ -0.28
GRIN2A-204ENST00000463531 ARHGEF5Q12774 1597 aa13.27□□□□□ -0.29
GRIN2A-204ENST00000463531 SCAF11Q99590 1463 aaKnown RBP13.26□□□□□ -0.29
GRIN2A-204ENST00000463531 NCOA2Q15596 1464 aa13.25□□□□□ -0.29
GRIN2A-204ENST00000463531 RSPH4AQ5TD94 716 aa13.25□□□□□ -0.29
GRIN2A-204ENST00000463531 MROH1Q8NDA8 1641 aa13.24□□□□□ -0.29
GRIN2A-204ENST00000463531 EIF2AK4Q9P2K8 1649 aaKnown RBP13.24□□□□□ -0.29
GRIN2A-204ENST00000463531 POTEAQ6S8J7 498 aa13.24□□□□□ -0.29
GRIN2A-204ENST00000463531 SETD1AO15047 1707 aaKnown RBP13.24□□□□□ -0.29
GRIN2A-204ENST00000463531 SLIT1O75093 1534 aa13.23□□□□□ -0.29
GRIN2A-204ENST00000463531 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
GRIN2A-204ENST00000463531 LTKP29376 864 aa13.22□□□□□ -0.29
GRIN2A-204ENST00000463531 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
GRIN2A-204ENST00000463531 ROBO1Q9Y6N7 1651 aa13.21□□□□□ -0.29
GRIN2A-204ENST00000463531 MAST1Q9Y2H9 1570 aa13.21□□□□□ -0.29
GRIN2A-204ENST00000463531 TSPY4P0CV99 314 aa13.21□□□□□ -0.29
GRIN2A-204ENST00000463531 TSPY10P0CW01 314 aa13.21□□□□□ -0.29
GRIN2A-204ENST00000463531 TXNDC2Q86VQ3 553 aa13.2□□□□□ -0.3
GRIN2A-204ENST00000463531 PIK3C2BO00750 1634 aa13.18□□□□□ -0.3
GRIN2A-204ENST00000463531 MAP3K1Q13233 1512 aa13.17□□□□□ -0.3
GRIN2A-204ENST00000463531 TMEM94Q12767 1356 aa13.17□□□□□ -0.3
GRIN2A-204ENST00000463531 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
GRIN2A-204ENST00000463531 PHLPP1O60346 1717 aa13.15□□□□□ -0.3
GRIN2A-204ENST00000463531 PRDM15P57071 1507 aaPredicted RBP13.14□□□□□ -0.31
GRIN2A-204ENST00000463531 TMEM2Q9UHN6 1383 aa13.14□□□□□ -0.31
GRIN2A-204ENST00000463531 KDM5AP29375 1690 aaKnown RBP13.14□□□□□ -0.31
GRIN2A-204ENST00000463531 ARHGAP31Q2M1Z3 1444 aa13.13□□□□□ -0.31
GRIN2A-204ENST00000463531 DUOX2Q9NRD8 1548 aa13.13□□□□□ -0.31
GRIN2A-204ENST00000463531 LRRC9Q6ZRR7 1453 aa13.13□□□□□ -0.31
GRIN2A-204ENST00000463531 RBM33Q96EV2 1170 aaKnown RBP13.12□□□□□ -0.31
GRIN2A-204ENST00000463531 EFCAB6Q5THR3 1501 aa13.12□□□□□ -0.31
GRIN2A-204ENST00000463531 TET3O43151 1660 aa13.12□□□□□ -0.31
GRIN2A-204ENST00000463531 KCNA6P17658 529 aa13.11□□□□□ -0.31
GRIN2A-204ENST00000463531 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
GRIN2A-204ENST00000463531 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
GRIN2A-204ENST00000463531 PROSER2Q86WR7 435 aaPredicted RBP13.1□□□□□ -0.31
GRIN2A-204ENST00000463531 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
GRIN2A-204ENST00000463531 CROCC2H7BZ55 1655 aa13.09□□□□□ -0.31
GRIN2A-204ENST00000463531 SLC26A8Q96RN1 970 aa13.09□□□□□ -0.31
GRIN2A-204ENST00000463531 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
GRIN2A-204ENST00000463531 COL16A1Q07092 1604 aaPredicted RBP13.09□□□□□ -0.31
GRIN2A-204ENST00000463531 JCADQ9P266 1359 aa13.08□□□□□ -0.31
GRIN2A-204ENST00000463531 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
GRIN2A-204ENST00000463531 ERBINQ96RT1 1412 aa13.07□□□□□ -0.32
GRIN2A-204ENST00000463531 MSH6P52701 1360 aa13.07□□□□□ -0.32
GRIN2A-204ENST00000463531 CHD2O14647 1828 aaKnown RBP13.06□□□□□ -0.32
GRIN2A-204ENST00000463531 MYOM3Q5VTT5 1437 aa13.06□□□□□ -0.32
GRIN2A-204ENST00000463531 IDI1Q13907 227 aa13.06□□□□□ -0.32
GRIN2A-204ENST00000463531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
GRIN2A-204ENST00000463531 SLAIN2Q9P270 581 aa13.06□□□□□ -0.32
GRIN2A-204ENST00000463531 LRP6O75581 1613 aa13.06□□□□□ -0.32
GRIN2A-204ENST00000463531 ADGRB3O60242 1522 aa13.05□□□□□ -0.32
GRIN2A-204ENST00000463531 MYO5BQ9ULV0 1848 aa13.05□□□□□ -0.32
GRIN2A-204ENST00000463531 UPF1Q92900 1129 aaKnown RBP eCLIP13.05□□□□□ -0.32
GRIN2A-204ENST00000463531 RRP7BPQ9NSQ0 103 aa13.03□□□□□ -0.32
GRIN2A-204ENST00000463531 KANK1Q14678 1352 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms