RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 SPDYE16A6NNV3 312 aaPredicted RBP9.06□□□□□ -0.96
VRK2-208ENST00000463222 FOXK1P85037 733 aa9.05□□□□□ -0.96
VRK2-208ENST00000463222 PDIA6Q15084 440 aa9.05□□□□□ -0.96
VRK2-208ENST00000463222 IL27Q8NEV9 243 aa9.05□□□□□ -0.96
VRK2-208ENST00000463222 PLPP6Q8IY26 295 aa9.04□□□□□ -0.96
VRK2-208ENST00000463222 AXIN2Q9Y2T1 843 aa9.04□□□□□ -0.96
VRK2-208ENST00000463222 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
VRK2-208ENST00000463222 GRXCR2A6NFK2 248 aa9.02□□□□□ -0.97
VRK2-208ENST00000463222 TRIM66O15016 1216 aa9.02□□□□□ -0.97
VRK2-208ENST00000463222 ADGRD1Q6QNK2 874 aa9.02□□□□□ -0.97
VRK2-208ENST00000463222 TK2O00142 265 aa9.01□□□□□ -0.97
VRK2-208ENST00000463222 SUPT5HO00267 1087 aaKnown RBP9□□□□□ -0.97
VRK2-208ENST00000463222 MAP3K9P80192 1104 aa9□□□□□ -0.97
VRK2-208ENST00000463222 PDE4DQ08499 809 aa9□□□□□ -0.97
VRK2-208ENST00000463222 KDM4CQ9H3R0 1056 aa9□□□□□ -0.97
VRK2-208ENST00000463222 ARXQ96QS3 562 aa8.99□□□□□ -0.97
VRK2-208ENST00000463222 HCSTQ9UBK5 93 aa8.99□□□□□ -0.97
VRK2-208ENST00000463222 NUTM2FA1L443 756 aa8.98□□□□□ -0.97
VRK2-208ENST00000463222 GPR37O15354 613 aa8.97□□□□□ -0.97
VRK2-208ENST00000463222 PPP4R3BQ5MIZ7 849 aa8.97□□□□□ -0.97
VRK2-208ENST00000463222 UPF1Q92900 1129 aaKnown RBP eCLIP8.97□□□□□ -0.97
VRK2-208ENST00000463222 HRO43593 1189 aa8.96□□□□□ -0.98
VRK2-208ENST00000463222 TBC1D12O60347 775 aa8.96□□□□□ -0.98
VRK2-208ENST00000463222 PLA2G2EQ9NZK7 142 aa8.94□□□□□ -0.98
VRK2-208ENST00000463222 OSBPP22059 807 aa8.93□□□□□ -0.98
VRK2-208ENST00000463222 DMRTA1Q5VZB9 504 aa8.93□□□□□ -0.98
VRK2-208ENST00000463222 MINK1Q8N4C8 1332 aaPredicted RBP8.92□□□□□ -0.98
VRK2-208ENST00000463222 PSEN2P49810 448 aa8.92□□□□□ -0.98
VRK2-208ENST00000463222 OXER1Q8TDS5 423 aa8.91□□□□□ -0.98
VRK2-208ENST00000463222 DDX12PQ92771 950 aa8.91□□□□□ -0.98
VRK2-208ENST00000463222 FAM117AQ9C073 453 aa8.91□□□□□ -0.98
VRK2-208ENST00000463222 DAXXQ9UER7 740 aaPredicted RBP8.91□□□□□ -0.98
VRK2-208ENST00000463222 CCDC102AQ96A19 550 aa8.9□□□□□ -0.98
VRK2-208ENST00000463222 KCNH8Q96L42 1107 aa8.9□□□□□ -0.98
VRK2-208ENST00000463222 IRF6O14896 467 aa8.89□□□□□ -0.99
VRK2-208ENST00000463222 FECHP22830 423 aa8.89□□□□□ -0.99
VRK2-208ENST00000463222 MAP2K5Q13163 448 aa8.88□□□□□ -0.99
VRK2-208ENST00000463222 HOMEZQ8IX15 550 aa8.88□□□□□ -0.99
VRK2-208ENST00000463222 GNPATO15228 680 aa8.87□□□□□ -0.99
VRK2-208ENST00000463222 PRIM1P49642 420 aaKnown RBP8.87□□□□□ -0.99
VRK2-208ENST00000463222 KCNK17Q96T54 332 aa8.87□□□□□ -0.99
VRK2-208ENST00000463222 EVI5O60447 810 aa8.86□□□□□ -0.99
VRK2-208ENST00000463222 FCHSD2O94868 740 aa8.86□□□□□ -0.99
VRK2-208ENST00000463222 SLC4A5Q9BY07 1137 aa8.86□□□□□ -0.99
VRK2-208ENST00000463222 BCL2L12Q9HB09 334 aa8.86□□□□□ -0.99
VRK2-208ENST00000463222 PLEKHG3A1L390 1219 aa8.84□□□□□ -0.99
VRK2-208ENST00000463222 HIC1Q14526 733 aa8.84□□□□□ -0.99
VRK2-208ENST00000463222 VPS9D1Q9Y2B5 631 aa8.84□□□□□ -0.99
VRK2-208ENST00000463222 PARP9Q8IXQ6 854 aa8.83□□□□□ -1
VRK2-208ENST00000463222 KCTD12Q96CX2 325 aaKnown RBP8.83□□□□□ -1
VRK2-208ENST00000463222 STAC3Q96MF2 364 aa8.83□□□□□ -1
VRK2-208ENST00000463222 ZMYND15Q9H091 742 aa8.83□□□□□ -1
VRK2-208ENST00000463222 AMHR2Q16671 573 aa8.82□□□□□ -1
VRK2-208ENST00000463222 ZNF454Q8N9F8 522 aa8.82□□□□□ -1
VRK2-208ENST00000463222 FOSBP53539 338 aa8.81□□□□□ -1
VRK2-208ENST00000463222 PTGDRQ13258 359 aa8.8□□□□□ -1
VRK2-208ENST00000463222 DDRGK1Q96HY6 314 aa8.8□□□□□ -1
VRK2-208ENST00000463222 JPH4Q96JJ6 628 aa8.8□□□□□ -1
VRK2-208ENST00000463222 ANO8Q9HCE9 1232 aaPredicted RBP8.8□□□□□ -1
VRK2-208ENST00000463222 TTLL12Q14166 644 aaPredicted RBP8.79□□□□□ -1
VRK2-208ENST00000463222 BHMG1C9JSJ3 638 aaPredicted RBP8.78□□□□□ -1
VRK2-208ENST00000463222 PTPREP23469 700 aa8.78□□□□□ -1
VRK2-208ENST00000463222 IFFO2Q5TF58 517 aa8.78□□□□□ -1
VRK2-208ENST00000463222 ZBED2Q9BTP6 218 aa8.77□□□□□ -1.01
VRK2-208ENST00000463222 REPIN1Q9BWE0 567 aaKnown RBP8.76□□□□□ -1.01
VRK2-208ENST00000463222 CDHR5Q9HBB8 845 aa8.76□□□□□ -1.01
VRK2-208ENST00000463222 RBM33Q96EV2 1170 aaKnown RBP8.75□□□□□ -1.01
VRK2-208ENST00000463222 RGS20O76081 388 aa8.74□□□□□ -1.01
VRK2-208ENST00000463222 MS4A1P11836 297 aa8.74□□□□□ -1.01
VRK2-208ENST00000463222 GIGYF2Q6Y7W6 1299 aaKnown RBP8.74□□□□□ -1.01
VRK2-208ENST00000463222 THSD4Q6ZMP0 1018 aa8.74□□□□□ -1.01
VRK2-208ENST00000463222 RSPH6AQ9H0K4 717 aa8.74□□□□□ -1.01
VRK2-208ENST00000463222 NPDC1Q9NQX5 325 aaPredicted RBP8.74□□□□□ -1.01
VRK2-208ENST00000463222 ZDHHC16Q969W1 377 aa8.73□□□□□ -1.01
VRK2-208ENST00000463222 MAP3K7O43318 606 aa8.72□□□□□ -1.01
VRK2-208ENST00000463222 EN1Q05925 392 aaPredicted RBP8.72□□□□□ -1.01
VRK2-208ENST00000463222 PHF14O94880 888 aa8.71□□□□□ -1.02
VRK2-208ENST00000463222 PTPN5P54829 565 aa8.71□□□□□ -1.02
VRK2-208ENST00000463222 MRPL50Q8N5N7 158 aaKnown RBP8.71□□□□□ -1.02
VRK2-208ENST00000463222 EPAS1Q99814 870 aa8.71□□□□□ -1.02
VRK2-208ENST00000463222 ADAM33Q9BZ11 813 aa8.71□□□□□ -1.02
VRK2-208ENST00000463222 NBPF3Q9H094 633 aa8.71□□□□□ -1.02
VRK2-208ENST00000463222 TSR1Q2NL82 804 aaKnown RBP8.7□□□□□ -1.02
VRK2-208ENST00000463222 PCDHGA10Q9Y5H3 936 aa8.7□□□□□ -1.02
VRK2-208ENST00000463222 WNT2BQ93097 391 aa8.69□□□□□ -1.02
VRK2-208ENST00000463222 GOLGA8CPA6NN73 597 aa8.68□□□□□ -1.02
VRK2-208ENST00000463222 PPP1R3GB7ZBB8 358 aa8.68□□□□□ -1.02
VRK2-208ENST00000463222 UBTFP17480 764 aaKnown RBP8.68□□□□□ -1.02
VRK2-208ENST00000463222 MDM2Q00987 491 aaPredicted RBP8.68□□□□□ -1.02
VRK2-208ENST00000463222 FAM161AQ3B820 660 aa8.68□□□□□ -1.02
VRK2-208ENST00000463222 PCMTD1Q96MG8 357 aaPredicted RBP8.68□□□□□ -1.02
VRK2-208ENST00000463222 PHOX2BQ99453 314 aa8.68□□□□□ -1.02
VRK2-208ENST00000463222 ARID3AQ99856 593 aa8.67□□□□□ -1.02
VRK2-208ENST00000463222 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
VRK2-208ENST00000463222 GOPCQ9HD26 462 aa8.67□□□□□ -1.02
VRK2-208ENST00000463222 A0A0G2JS52 829 aa8.66□□□□□ -1.02
VRK2-208ENST00000463222 TYW1BQ6NUM6 668 aa8.66□□□□□ -1.02
VRK2-208ENST00000463222 FBXW7Q969H0 707 aa8.66□□□□□ -1.02
VRK2-208ENST00000463222 ARID3CA6NKF2 412 aa8.65□□□□□ -1.02
VRK2-208ENST00000463222 SSTR3P32745 418 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms