RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 SIGLEC1Q9BZZ2 1709 aa21.32■■□□□ 1
COL6A1-202ENST00000463060 UNC13BO14795 1591 aa21.31■■□□□ 1
COL6A1-202ENST00000463060 KDM5DQ9BY66 1539 aa21.29■■□□□ 1
COL6A1-202ENST00000463060 MROH1Q8NDA8 1641 aa21.29■■□□□ 1
COL6A1-202ENST00000463060 RNF17Q9BXT8 1623 aaKnown RBP21.29■■□□□ 1
COL6A1-202ENST00000463060 VWDEQ8N2E2 1590 aa21.27■■□□□ 1
COL6A1-202ENST00000463060 PZPP20742 1482 aa21.27■■□□□ 1
COL6A1-202ENST00000463060 NUP155O75694 1391 aa21.27■■□□□ 1
COL6A1-202ENST00000463060 DHX57Q6P158 1386 aaKnown RBP21.27■■□□□ 1
COL6A1-202ENST00000463060 TRIM52Q96A61 297 aa21.27■■□□□ 1
COL6A1-202ENST00000463060 PRDM15P57071 1507 aaPredicted RBP21.25■□□□□ 0.99
COL6A1-202ENST00000463060 MPHOSPH9Q99550 1183 aa21.24■□□□□ 0.99
COL6A1-202ENST00000463060 IQGAP3Q86VI3 1631 aa21.22■□□□□ 0.99
COL6A1-202ENST00000463060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.22■□□□□ 0.994e-7■■■■□ 22.7
COL6A1-202ENST00000463060 GGT6Q6P531 493 aa21.21■□□□□ 0.99
COL6A1-202ENST00000463060 FAM135AQ9P2D6 1515 aa21.2■□□□□ 0.98
COL6A1-202ENST00000463060 PPP6R1Q9UPN7 881 aa21.2■□□□□ 0.98
COL6A1-202ENST00000463060 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
COL6A1-202ENST00000463060 SLC4A1APQ9BWU0 796 aaKnown RBP21.18■□□□□ 0.98
COL6A1-202ENST00000463060 KANK1Q14678 1352 aa21.18■□□□□ 0.98
COL6A1-202ENST00000463060 ABCC3O15438 1527 aa21.14■□□□□ 0.98
COL6A1-202ENST00000463060 PKD2Q13563 968 aa21.14■□□□□ 0.97
COL6A1-202ENST00000463060 ARID4BQ4LE39 1312 aaPredicted RBP21.13■□□□□ 0.97
COL6A1-202ENST00000463060 TET3O43151 1660 aa21.12■□□□□ 0.97
COL6A1-202ENST00000463060 CLSPNQ9HAW4 1339 aa21.12■□□□□ 0.97
COL6A1-202ENST00000463060 WASHC2CQ9Y4E1 1318 aa21.12■□□□□ 0.97
COL6A1-202ENST00000463060 CCER1Q8TC90 406 aaPredicted RBP21.12■□□□□ 0.97
COL6A1-202ENST00000463060 CEP152O94986 1710 aa21.11■□□□□ 0.97
COL6A1-202ENST00000463060 ZC3H13Q5T200 1668 aaKnown RBP21.1■□□□□ 0.97
COL6A1-202ENST00000463060 MLECQ14165 292 aa21.09■□□□□ 0.97
COL6A1-202ENST00000463060 FOXD1Q16676 465 aa21.09■□□□□ 0.97
COL6A1-202ENST00000463060 ARHGAP31Q2M1Z3 1444 aa21.09■□□□□ 0.97
COL6A1-202ENST00000463060 ANKRD30BQ9BXX2 1392 aa21.09■□□□□ 0.97
COL6A1-202ENST00000463060 EFCAB6Q5THR3 1501 aa21.09■□□□□ 0.97
COL6A1-202ENST00000463060 E9PCH4 1651 aa21.07■□□□□ 0.96
COL6A1-202ENST00000463060 PLA2R1Q13018 1463 aa21.06■□□□□ 0.96
COL6A1-202ENST00000463060 CAMSAP1Q5T5Y3 1602 aa21.05■□□□□ 0.96
COL6A1-202ENST00000463060 PTPRTO14522 1441 aa21.04■□□□□ 0.96
COL6A1-202ENST00000463060 NPATQ14207 1427 aa21.04■□□□□ 0.96
COL6A1-202ENST00000463060 RPRD2Q5VT52 1461 aaKnown RBP21.04■□□□□ 0.96
COL6A1-202ENST00000463060 CLTCQ00610 1675 aaKnown RBP21.03■□□□□ 0.96
COL6A1-202ENST00000463060 KDM4FA0A1W2PPD8 638 aa21.03■□□□□ 0.96
COL6A1-202ENST00000463060 CNTLNQ9NXG0 1405 aa21.03■□□□□ 0.96
COL6A1-202ENST00000463060 ADAMTSL3P82987 1691 aa21.02■□□□□ 0.96
COL6A1-202ENST00000463060 ZMYM3Q14202 1370 aa21■□□□□ 0.95
COL6A1-202ENST00000463060 MROH2AA6NES4 1674 aa20.99■□□□□ 0.95
COL6A1-202ENST00000463060 NOS1P29475 1434 aa20.99■□□□□ 0.95
COL6A1-202ENST00000463060 SIN3AQ96ST3 1273 aa20.98■□□□□ 0.95
COL6A1-202ENST00000463060 ESF1Q9H501 851 aaKnown RBP20.97■□□□□ 0.95
COL6A1-202ENST00000463060 FER1L4A9Z1Z3 1794 aa20.96■□□□□ 0.95
COL6A1-202ENST00000463060 FBXO31Q5XUX0 539 aaPredicted RBP20.95■□□□□ 0.94
COL6A1-202ENST00000463060 MADDQ8WXG6 1647 aa20.95■□□□□ 0.94
COL6A1-202ENST00000463060 SPHKAPQ2M3C7 1700 aa20.95■□□□□ 0.94
COL6A1-202ENST00000463060 TRPM2O94759 1503 aa20.94■□□□□ 0.94
COL6A1-202ENST00000463060 ERVK-7P63135 1459 aa20.93■□□□□ 0.94
COL6A1-202ENST00000463060 PREX1Q8TCU6 1659 aa20.93■□□□□ 0.94
COL6A1-202ENST00000463060 CFAP65Q6ZU64 1925 aaKnown RBP20.92■□□□□ 0.94
COL6A1-202ENST00000463060 SYNMO15061 1565 aa20.91■□□□□ 0.94
COL6A1-202ENST00000463060 SPATA31D1Q6ZQQ2 1576 aa20.91■□□□□ 0.94
COL6A1-202ENST00000463060 C3P01024 1663 aa20.89■□□□□ 0.94
COL6A1-202ENST00000463060 CEBPAP49715 358 aaPredicted RBP20.89■□□□□ 0.93
COL6A1-202ENST00000463060 CCDC144AA2RUR9 1427 aa20.88■□□□□ 0.93
COL6A1-202ENST00000463060 NEUROD1Q13562 356 aa20.88■□□□□ 0.93
COL6A1-202ENST00000463060 RIMS1Q86UR5 1692 aaKnown RBP20.88■□□□□ 0.93
COL6A1-202ENST00000463060 PIK3C2BO00750 1634 aa20.87■□□□□ 0.93
COL6A1-202ENST00000463060 CLTCL1P53675 1640 aa20.87■□□□□ 0.93
COL6A1-202ENST00000463060 TIMELESSQ9UNS1 1208 aa20.87■□□□□ 0.93
COL6A1-202ENST00000463060 SLC52A1Q9NWF4 448 aa20.86■□□□□ 0.93
COL6A1-202ENST00000463060 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
COL6A1-202ENST00000463060 IDI1Q13907 227 aa20.84■□□□□ 0.93
COL6A1-202ENST00000463060 SPATA31E1Q6ZUB1 1445 aa20.83■□□□□ 0.93
COL6A1-202ENST00000463060 NEURL4Q96JN8 1562 aa20.82■□□□□ 0.92
COL6A1-202ENST00000463060 TNRQ92752 1358 aa20.82■□□□□ 0.92
COL6A1-202ENST00000463060 PTPRMP28827 1452 aa20.81■□□□□ 0.92
COL6A1-202ENST00000463060 ZEB1P37275 1124 aaPredicted RBP20.81■□□□□ 0.92
COL6A1-202ENST00000463060 L3MBTL2Q969R5 705 aa20.78■□□□□ 0.92
COL6A1-202ENST00000463060 ADGRB3O60242 1522 aa20.76■□□□□ 0.91
COL6A1-202ENST00000463060 KIF1BO60333 1816 aa20.76■□□□□ 0.91
COL6A1-202ENST00000463060 TONSLQ96HA7 1378 aa20.75■□□□□ 0.91
COL6A1-202ENST00000463060 NLRP1Q9C000 1473 aa20.75■□□□□ 0.91
COL6A1-202ENST00000463060 TMEM131LA2VDJ0 1609 aa20.75■□□□□ 0.91
COL6A1-202ENST00000463060 SETD1BQ9UPS6 1966 aaKnown RBP20.74■□□□□ 0.91
COL6A1-202ENST00000463060 PPP1R15AO75807 674 aaPredicted RBP20.73■□□□□ 0.91
COL6A1-202ENST00000463060 RGL3Q3MIN7 710 aa20.72■□□□□ 0.91
COL6A1-202ENST00000463060 A2ML1A8K2U0 1454 aa20.71■□□□□ 0.91
COL6A1-202ENST00000463060 KDM5AP29375 1690 aaKnown RBP20.7■□□□□ 0.91
COL6A1-202ENST00000463060 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
COL6A1-202ENST00000463060 RPGRIP1LQ68CZ1 1315 aa20.69■□□□□ 0.9
COL6A1-202ENST00000463060 MYO5BQ9ULV0 1848 aa20.68■□□□□ 0.9
COL6A1-202ENST00000463060 MYO3AQ8NEV4 1616 aa20.67■□□□□ 0.9
COL6A1-202ENST00000463060 CHGAP10645 457 aaKnown RBP20.67■□□□□ 0.9
COL6A1-202ENST00000463060 DCAF11Q8TEB1 546 aa20.67■□□□□ 0.9
COL6A1-202ENST00000463060 STAC3Q96MF2 364 aa20.67■□□□□ 0.9
COL6A1-202ENST00000463060 UBR1Q8IWV7 1749 aa20.67■□□□□ 0.9
COL6A1-202ENST00000463060 IFT172Q9UG01 1749 aa20.65■□□□□ 0.9
COL6A1-202ENST00000463060 UHRF1BP1Q6BDS2 1440 aa20.64■□□□□ 0.89
COL6A1-202ENST00000463060 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
COL6A1-202ENST00000463060 NBPF8Q3BBV2 869 aa20.63■□□□□ 0.89
COL6A1-202ENST00000463060 ILDR1Q86SU0 546 aaPredicted RBP20.63■□□□□ 0.89
COL6A1-202ENST00000463060 CEP170BQ9Y4F5 1589 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms