RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 PROSER2Q86WR7 435 aaPredicted RBP9.48□□□□□ -0.89
SGCE-209ENST00000462731 MYT1LQ9UL68 1186 aa9.47□□□□□ -0.89
SGCE-209ENST00000462731 PDE4CQ08493 712 aa9.46□□□□□ -0.9
SGCE-209ENST00000462731 C3orf67Q6ZVT6 689 aa9.46□□□□□ -0.9
SGCE-209ENST00000462731 ZNF777Q9ULD5 760 aaPredicted RBP9.46□□□□□ -0.9
SGCE-209ENST00000462731 ARIH1Q9Y4X5 557 aaPredicted RBP9.45□□□□□ -0.9
SGCE-209ENST00000462731 MCM6Q14566 821 aa9.44□□□□□ -0.9
SGCE-209ENST00000462731 FAM177A1Q8N128 213 aaPredicted RBP9.42□□□□□ -0.9
SGCE-209ENST00000462731 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
SGCE-209ENST00000462731 FAM212AQ96EL1 285 aa9.41□□□□□ -0.9
SGCE-209ENST00000462731 PPP1R15AO75807 674 aaPredicted RBP9.4□□□□□ -0.9
SGCE-209ENST00000462731 RBM26Q5T8P6 1007 aaKnown RBP9.4□□□□□ -0.9
SGCE-209ENST00000462731 KCNA1Q09470 495 aa9.38□□□□□ -0.91
SGCE-209ENST00000462731 L3MBTL3Q96JM7 780 aaPredicted RBP9.38□□□□□ -0.91
SGCE-209ENST00000462731 PDCD7Q8N8D1 485 aaKnown RBP9.37□□□□□ -0.91
SGCE-209ENST00000462731 ERBB3P21860 1342 aa9.36□□□□□ -0.91
SGCE-209ENST00000462731 BRD2P25440 801 aaKnown RBP9.36□□□□□ -0.91
SGCE-209ENST00000462731 PCMTD1Q96MG8 357 aaPredicted RBP9.35□□□□□ -0.91
SGCE-209ENST00000462731 HOXB1P14653 301 aaPredicted RBP9.34□□□□□ -0.91
SGCE-209ENST00000462731 CCDC125Q86Z20 511 aa9.34□□□□□ -0.91
SGCE-209ENST00000462731 AMHR2Q16671 573 aa9.33□□□□□ -0.92
SGCE-209ENST00000462731 HOXB3P14651 431 aaPredicted RBP9.32□□□□□ -0.92
SGCE-209ENST00000462731 CANXP27824 592 aaKnown RBP9.32□□□□□ -0.92
SGCE-209ENST00000462731 BRD1O95696 1058 aa9.31□□□□□ -0.92
SGCE-209ENST00000462731 CCDC27Q2M243 656 aa9.31□□□□□ -0.92
SGCE-209ENST00000462731 PARP9Q8IXQ6 854 aa9.3□□□□□ -0.92
SGCE-209ENST00000462731 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
SGCE-209ENST00000462731 PTGER2P43116 358 aa9.29□□□□□ -0.92
SGCE-209ENST00000462731 IGSF5Q9NSI5 407 aa9.29□□□□□ -0.92
SGCE-209ENST00000462731 MINK1Q8N4C8 1332 aaPredicted RBP9.29□□□□□ -0.92
SGCE-209ENST00000462731 ACIN1Q9UKV3 1341 aaKnown RBP9.29□□□□□ -0.92
SGCE-209ENST00000462731 ZNF710Q8N1W2 664 aa9.28□□□□□ -0.92
SGCE-209ENST00000462731 POM121Q96HA1 1249 aa9.28□□□□□ -0.92
SGCE-209ENST00000462731 MFRPQ9BY79 579 aa9.28□□□□□ -0.92
SGCE-209ENST00000462731 MLLT3P42568 568 aaPredicted RBP9.27□□□□□ -0.93
SGCE-209ENST00000462731 MFSD10Q14728 455 aa9.27□□□□□ -0.93
SGCE-209ENST00000462731 DHX37Q8IY37 1157 aaKnown RBP9.27□□□□□ -0.93
SGCE-209ENST00000462731 VARS2Q5ST30 1063 aaKnown RBP9.26□□□□□ -0.93
SGCE-209ENST00000462731 GPR37O15354 613 aa9.25□□□□□ -0.93
SGCE-209ENST00000462731 PPM1GO15355 546 aaPredicted RBP9.25□□□□□ -0.93
SGCE-209ENST00000462731 USTQ9Y2C2 406 aa9.25□□□□□ -0.93
SGCE-209ENST00000462731 MAP2K5Q13163 448 aa9.24□□□□□ -0.93
SGCE-209ENST00000462731 CAMK2BQ13554 666 aa9.24□□□□□ -0.93
SGCE-209ENST00000462731 ZNF687Q8N1G0 1237 aa9.24□□□□□ -0.93
SGCE-209ENST00000462731 CCDC102AQ96A19 550 aa9.24□□□□□ -0.93
SGCE-209ENST00000462731 NCKAP5LQ9HCH0 1330 aa9.24□□□□□ -0.93
SGCE-209ENST00000462731 SND1Q7KZF4 910 aaKnown RBP eCLIP9.23□□□□□ -0.93
SGCE-209ENST00000462731 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
SGCE-209ENST00000462731 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
SGCE-209ENST00000462731 PPP1R37O75864 691 aa9.21□□□□□ -0.94
SGCE-209ENST00000462731 SH3D19Q5HYK7 790 aa9.21□□□□□ -0.94
SGCE-209ENST00000462731 UBE2Q2Q8WVN8 375 aa9.21□□□□□ -0.94
SGCE-209ENST00000462731 LARP6Q9BRS8 491 aaKnown RBP9.21□□□□□ -0.94
SGCE-209ENST00000462731 UNCXA6NJT0 531 aa9.2□□□□□ -0.94
SGCE-209ENST00000462731 PYGBP11216 843 aa9.2□□□□□ -0.94
SGCE-209ENST00000462731 PDE4AP27815 886 aa9.2□□□□□ -0.94
SGCE-209ENST00000462731 DOK7Q18PE1 504 aa9.2□□□□□ -0.94
SGCE-209ENST00000462731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.2□□□□□ -0.94
SGCE-209ENST00000462731 COG6Q9Y2V7 657 aa9.2□□□□□ -0.94
SGCE-209ENST00000462731 ZNF330Q9Y3S2 320 aaPredicted RBP9.2□□□□□ -0.94
SGCE-209ENST00000462731 IRF6O14896 467 aa9.19□□□□□ -0.94
SGCE-209ENST00000462731 GOLGA2Q08379 1002 aa9.19□□□□□ -0.94
SGCE-209ENST00000462731 RBM47A0AV96 593 aaKnown RBP9.18□□□□□ -0.94
SGCE-209ENST00000462731 SPDYE5A6NIY4 337 aa9.18□□□□□ -0.94
SGCE-209ENST00000462731 DDX27Q96GQ7 796 aaKnown RBP9.17□□□□□ -0.94
SGCE-209ENST00000462731 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
SGCE-209ENST00000462731 ZNF467Q7Z7K2 595 aaPredicted RBP9.16□□□□□ -0.94
SGCE-209ENST00000462731 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
SGCE-209ENST00000462731 ANKRD13DQ6ZTN6 518 aa9.15□□□□□ -0.94
SGCE-209ENST00000462731 IVNS1ABPQ9Y6Y0 642 aa9.15□□□□□ -0.94
SGCE-209ENST00000462731 PBXIP1Q96AQ6 731 aa9.14□□□□□ -0.95
SGCE-209ENST00000462731 CRISPLD2Q9H0B8 497 aa9.14□□□□□ -0.95
SGCE-209ENST00000462731 CWC22Q9HCG8 908 aaKnown RBP9.14□□□□□ -0.95
SGCE-209ENST00000462731 RIMBP2O15034 1052 aa9.13□□□□□ -0.95
SGCE-209ENST00000462731 DPY19L2Q6NUT2 758 aa9.12□□□□□ -0.95
SGCE-209ENST00000462731 FBXO22Q8NEZ5 403 aa9.12□□□□□ -0.95
SGCE-209ENST00000462731 SPATA32Q96LK8 384 aa9.12□□□□□ -0.95
SGCE-209ENST00000462731 CSB-PGBD3P0DP91 1061 aa9.11□□□□□ -0.95
SGCE-209ENST00000462731 MS4A1P11836 297 aa9.11□□□□□ -0.95
SGCE-209ENST00000462731 NLRP6P59044 892 aa9.11□□□□□ -0.95
SGCE-209ENST00000462731 ILDR1Q86SU0 546 aaPredicted RBP9.11□□□□□ -0.95
SGCE-209ENST00000462731 OXER1Q8TDS5 423 aa9.11□□□□□ -0.95
SGCE-209ENST00000462731 NCLP19338 710 aaKnown RBP9.1□□□□□ -0.95
SGCE-209ENST00000462731 SKIV2LQ15477 1246 aaKnown RBP9.1□□□□□ -0.95
SGCE-209ENST00000462731 GIGYF2Q6Y7W6 1299 aaKnown RBP9.1□□□□□ -0.95
SGCE-209ENST00000462731 CALR3Q96L12 384 aaKnown RBP9.1□□□□□ -0.95
SGCE-209ENST00000462731 G3V3G9 751 aa9.09□□□□□ -0.95
SGCE-209ENST00000462731 FAM9AQ8IZU1 332 aaPredicted RBP9.09□□□□□ -0.95
SGCE-209ENST00000462731 BOLA1Q9Y3E2 137 aa9.09□□□□□ -0.95
SGCE-209ENST00000462731 SPDYE16A6NNV3 312 aaPredicted RBP9.08□□□□□ -0.96
SGCE-209ENST00000462731 TBC1D12O60347 775 aa9.08□□□□□ -0.96
SGCE-209ENST00000462731 WWC1Q8IX03 1113 aa9.08□□□□□ -0.96
SGCE-209ENST00000462731 ANKRD13AQ8IZ07 590 aa9.08□□□□□ -0.96
SGCE-209ENST00000462731 BANK1Q8NDB2 785 aa9.08□□□□□ -0.96
SGCE-209ENST00000462731 DRC1Q96MC2 740 aa9.08□□□□□ -0.96
SGCE-209ENST00000462731 GNPATO15228 680 aa9.06□□□□□ -0.96
SGCE-209ENST00000462731 SREK1Q8WXA9 508 aaKnown RBP9.06□□□□□ -0.96
SGCE-209ENST00000462731 C8orf37Q96NL8 207 aa9.06□□□□□ -0.96
SGCE-209ENST00000462731 ZSWIM6Q9HCJ5 1215 aa9.06□□□□□ -0.96
SGCE-209ENST00000462731 KIAA1522Q9P206 1035 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms