RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 FMN1Q68DA7 1419 aa11.81□□□□□ -0.52
LINC01140-201ENST00000461990 MCM4P33991 863 aa11.81□□□□□ -0.52
LINC01140-201ENST00000461990 ARID4BQ4LE39 1312 aaPredicted RBP11.81□□□□□ -0.52
LINC01140-201ENST00000461990 TRIM44Q96DX7 344 aaPredicted RBP11.8□□□□□ -0.52
LINC01140-201ENST00000461990 SKAP1Q86WV1 359 aa11.8□□□□□ -0.52
LINC01140-201ENST00000461990 ROCK2O75116 1388 aaKnown RBP11.8□□□□□ -0.52
LINC01140-201ENST00000461990 ZSCAN20P17040 1043 aaPredicted RBP11.79□□□□□ -0.52
LINC01140-201ENST00000461990 CRBNQ96SW2 442 aa11.79□□□□□ -0.52
LINC01140-201ENST00000461990 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
LINC01140-201ENST00000461990 TMEM51Q9NW97 253 aa11.79□□□□□ -0.52
LINC01140-201ENST00000461990 SCAPERQ9BY12 1400 aa11.79□□□□□ -0.52
LINC01140-201ENST00000461990 CUX1P39880 1505 aa11.79□□□□□ -0.52
LINC01140-201ENST00000461990 GTPBP4Q9BZE4 634 aaKnown RBP11.79□□□□□ -0.52
LINC01140-201ENST00000461990 ZHX1Q9UKY1 873 aaPredicted RBP11.79□□□□□ -0.52
LINC01140-201ENST00000461990 URB2Q14146 1524 aaKnown RBP11.78□□□□□ -0.52
LINC01140-201ENST00000461990 PPP4R3BQ5MIZ7 849 aa11.78□□□□□ -0.52
LINC01140-201ENST00000461990 PPP1R9BQ96SB3 815 aa11.78□□□□□ -0.52
LINC01140-201ENST00000461990 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.52
LINC01140-201ENST00000461990 PCF11O94913 1555 aaKnown RBP11.77□□□□□ -0.52
LINC01140-201ENST00000461990 FGD6Q6ZV73 1430 aa11.77□□□□□ -0.52
LINC01140-201ENST00000461990 DYNC1I1O14576 645 aa11.77□□□□□ -0.52
LINC01140-201ENST00000461990 ZSCAN30Q86W11 494 aa11.77□□□□□ -0.52
LINC01140-201ENST00000461990 PLEKHH2Q8IVE3 1493 aa11.77□□□□□ -0.53
LINC01140-201ENST00000461990 TRAK2O60296 914 aa11.76□□□□□ -0.53
LINC01140-201ENST00000461990 SENP3Q9H4L4 574 aaPredicted RBP11.76□□□□□ -0.53
LINC01140-201ENST00000461990 DNMBPQ6XZF7 1577 aa11.76□□□□□ -0.53
LINC01140-201ENST00000461990 TEX14Q8IWB6 1497 aa11.76□□□□□ -0.53
LINC01140-201ENST00000461990 E9PCH4 1651 aa11.76□□□□□ -0.53
LINC01140-201ENST00000461990 VGFO15240 615 aaPredicted RBP11.76□□□□□ -0.53
LINC01140-201ENST00000461990 TAF3Q5VWG9 929 aa11.76□□□□□ -0.53
LINC01140-201ENST00000461990 CCDC94Q9BW85 323 aaPredicted RBP11.76□□□□□ -0.53
LINC01140-201ENST00000461990 PTPRKQ15262 1439 aa11.76□□□□□ -0.53
LINC01140-201ENST00000461990 LETM1O95202 739 aaPredicted RBP11.75□□□□□ -0.53
LINC01140-201ENST00000461990 CCDC173Q0VFZ6 552 aa11.75□□□□□ -0.53
LINC01140-201ENST00000461990 HS1BP3Q53T59 392 aa11.75□□□□□ -0.53
LINC01140-201ENST00000461990 TNNT2P45379 298 aaPredicted RBP11.74□□□□□ -0.53
LINC01140-201ENST00000461990 FAM13BQ9NYF5 915 aa11.74□□□□□ -0.53
LINC01140-201ENST00000461990 ZMYM3Q14202 1370 aa11.74□□□□□ -0.53
LINC01140-201ENST00000461990 TMC1Q8TDI8 760 aa11.73□□□□□ -0.53
LINC01140-201ENST00000461990 DDX11L8A8MPP1 907 aa11.73□□□□□ -0.53
LINC01140-201ENST00000461990 SLKQ9H2G2 1235 aaPredicted RBP11.73□□□□□ -0.53
LINC01140-201ENST00000461990 FYCO1Q9BQS8 1478 aa11.73□□□□□ -0.53
LINC01140-201ENST00000461990 ZNF500O60304 480 aaPredicted RBP11.72□□□□□ -0.53
LINC01140-201ENST00000461990 RPRD2Q5VT52 1461 aaKnown RBP11.72□□□□□ -0.53
LINC01140-201ENST00000461990 KIF15Q9NS87 1388 aa11.71□□□□□ -0.53
LINC01140-201ENST00000461990 KIF27Q86VH2 1401 aa11.71□□□□□ -0.53
LINC01140-201ENST00000461990 TOPBP1Q92547 1522 aa11.71□□□□□ -0.53
LINC01140-201ENST00000461990 DNAJC5Q9H3Z4 198 aa11.71□□□□□ -0.53
LINC01140-201ENST00000461990 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
LINC01140-201ENST00000461990 MYBBP1AQ9BQG0 1328 aaKnown RBP11.71□□□□□ -0.54
LINC01140-201ENST00000461990 KDM5CP41229 1560 aa11.7□□□□□ -0.54
LINC01140-201ENST00000461990 FTSJ3Q8IY81 847 aaKnown RBP11.7□□□□□ -0.54
LINC01140-201ENST00000461990 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
LINC01140-201ENST00000461990 L3MBTL2Q969R5 705 aa11.7□□□□□ -0.54
LINC01140-201ENST00000461990 GZF1Q9H116 711 aaPredicted RBP11.7□□□□□ -0.54
LINC01140-201ENST00000461990 UQCRHLA0A096LP55 91 aa11.69□□□□□ -0.54
LINC01140-201ENST00000461990 UQCRHP07919 91 aa11.69□□□□□ -0.54
LINC01140-201ENST00000461990 CHMP5Q9NZZ3 219 aa11.69□□□□□ -0.54
LINC01140-201ENST00000461990 PLIN1O60240 522 aa11.69□□□□□ -0.54
LINC01140-201ENST00000461990 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
LINC01140-201ENST00000461990 RALBP1Q15311 655 aa11.69□□□□□ -0.54
LINC01140-201ENST00000461990 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
LINC01140-201ENST00000461990 IBTKQ9P2D0 1353 aaPredicted RBP11.69□□□□□ -0.54
LINC01140-201ENST00000461990 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
LINC01140-201ENST00000461990 ZNF830Q96NB3 372 aaPredicted RBP11.68□□□□□ -0.54
LINC01140-201ENST00000461990 MSNP26038 577 aaKnown RBP11.68□□□□□ -0.54
LINC01140-201ENST00000461990 PRDM10Q9NQV6 1147 aa11.68□□□□□ -0.54
LINC01140-201ENST00000461990 EIF3AQ14152 1382 aaKnown RBP11.67□□□□□ -0.54
LINC01140-201ENST00000461990 KIF14Q15058 1648 aa11.67□□□□□ -0.54
LINC01140-201ENST00000461990 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
LINC01140-201ENST00000461990 NBPF8Q3BBV2 869 aa11.67□□□□□ -0.54
LINC01140-201ENST00000461990 ANP32BQ92688 251 aaKnown RBP11.67□□□□□ -0.54
LINC01140-201ENST00000461990 TBC1D32Q96NH3 1257 aa11.67□□□□□ -0.54
LINC01140-201ENST00000461990 PTMSP20962 102 aa11.67□□□□□ -0.54
LINC01140-201ENST00000461990 CSPP1Q1MSJ5 1256 aa11.67□□□□□ -0.54
LINC01140-201ENST00000461990 R3HCC1Q9Y3T6 440 aaKnown RBP11.67□□□□□ -0.54
LINC01140-201ENST00000461990 NCOA3Q9Y6Q9 1424 aa11.66□□□□□ -0.54
LINC01140-201ENST00000461990 MAPK8IP3Q9UPT6 1336 aa11.66□□□□□ -0.54
LINC01140-201ENST00000461990 NOL7Q9UMY1 257 aaKnown RBP11.66□□□□□ -0.54
LINC01140-201ENST00000461990 TARBP1Q13395 1621 aaKnown RBP11.66□□□□□ -0.54
LINC01140-201ENST00000461990 SLC20A2Q08357 652 aa11.66□□□□□ -0.54
LINC01140-201ENST00000461990 GAS2L3Q86XJ1 694 aa11.66□□□□□ -0.54
LINC01140-201ENST00000461990 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
LINC01140-201ENST00000461990 SKOR2Q2VWA4 1001 aaPredicted RBP11.65□□□□□ -0.54
LINC01140-201ENST00000461990 C20orf194Q5TEA3 1177 aa11.65□□□□□ -0.54
LINC01140-201ENST00000461990 TEX2Q8IWB9 1127 aa11.65□□□□□ -0.54
LINC01140-201ENST00000461990 CASKIN1Q8WXD9 1431 aa11.65□□□□□ -0.54
LINC01140-201ENST00000461990 MCM5P33992 734 aa11.65□□□□□ -0.55
LINC01140-201ENST00000461990 SASS6Q6UVJ0 657 aa11.65□□□□□ -0.55
LINC01140-201ENST00000461990 SEC24BO95487 1268 aa11.64□□□□□ -0.55
LINC01140-201ENST00000461990 CDCA7LQ96GN5 454 aa11.63□□□□□ -0.55
LINC01140-201ENST00000461990 DDIT3P35638 169 aa11.63□□□□□ -0.55
LINC01140-201ENST00000461990 ARHGAP31Q2M1Z3 1444 aa11.63□□□□□ -0.55
LINC01140-201ENST00000461990 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
LINC01140-201ENST00000461990 PARD3Q8TEW0 1356 aa11.62□□□□□ -0.55
LINC01140-201ENST00000461990 ANKRD30BQ9BXX2 1392 aa11.62□□□□□ -0.55
LINC01140-201ENST00000461990 EIF4G3O43432 1585 aaKnown RBP11.62□□□□□ -0.55
LINC01140-201ENST00000461990 HOMEZQ8IX15 550 aa11.61□□□□□ -0.55
LINC01140-201ENST00000461990 EFCAB5A4FU69 1503 aa11.61□□□□□ -0.55
LINC01140-201ENST00000461990 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms