RNA–Protein interactions for RNA: ENST00000461620.1

SLC48A1-203, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 459 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-203ENST00000461620 HFM1A2PYH4 1435 aa23.82■■□□□ 1.4
SLC48A1-203ENST00000461620 KANK1Q14678 1352 aa23.81■■□□□ 1.4
SLC48A1-203ENST00000461620 WASHC2CQ9Y4E1 1318 aa23.8■■□□□ 1.4
SLC48A1-203ENST00000461620 RNF17Q9BXT8 1623 aaKnown RBP23.79■■□□□ 1.4
SLC48A1-203ENST00000461620 MADDQ8WXG6 1647 aa23.77■■□□□ 1.4
SLC48A1-203ENST00000461620 NAIPQ13075 1403 aa23.77■■□□□ 1.4
SLC48A1-203ENST00000461620 PTPRMP28827 1452 aa23.76■■□□□ 1.39
SLC48A1-203ENST00000461620 KDM5DQ9BY66 1539 aa23.75■■□□□ 1.39
SLC48A1-203ENST00000461620 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
SLC48A1-203ENST00000461620 FER1L4A9Z1Z3 1794 aa23.74■■□□□ 1.39
SLC48A1-203ENST00000461620 ZMYM3Q14202 1370 aa23.73■■□□□ 1.39
SLC48A1-203ENST00000461620 PRDM15P57071 1507 aaPredicted RBP23.73■■□□□ 1.39
SLC48A1-203ENST00000461620 DEPDC5O75140 1603 aa23.72■■□□□ 1.39
SLC48A1-203ENST00000461620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.71■■□□□ 1.39
SLC48A1-203ENST00000461620 MROH2AA6NES4 1674 aa23.7■■□□□ 1.39
SLC48A1-203ENST00000461620 TRIM26Q12899 539 aaPredicted RBP23.7■■□□□ 1.38
SLC48A1-203ENST00000461620 RIMS1Q86UR5 1692 aaKnown RBP23.7■■□□□ 1.38
SLC48A1-203ENST00000461620 ZC3H13Q5T200 1668 aaKnown RBP23.69■■□□□ 1.38
SLC48A1-203ENST00000461620 GCC2Q8IWJ2 1684 aa23.68■■□□□ 1.38
SLC48A1-203ENST00000461620 MROH1Q8NDA8 1641 aa23.68■■□□□ 1.38
SLC48A1-203ENST00000461620 HRCP23327 699 aa23.67■■□□□ 1.38
SLC48A1-203ENST00000461620 ABCC3O15438 1527 aa23.67■■□□□ 1.38
SLC48A1-203ENST00000461620 LMTK2Q8IWU2 1503 aa23.67■■□□□ 1.38
SLC48A1-203ENST00000461620 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
SLC48A1-203ENST00000461620 NPATQ14207 1427 aa23.66■■□□□ 1.38
SLC48A1-203ENST00000461620 ARHGAP31Q2M1Z3 1444 aa23.66■■□□□ 1.38
SLC48A1-203ENST00000461620 VWDEQ8N2E2 1590 aa23.65■■□□□ 1.38
SLC48A1-203ENST00000461620 UNC13BO14795 1591 aa23.65■■□□□ 1.38
SLC48A1-203ENST00000461620 NUP155O75694 1391 aa23.65■■□□□ 1.38
SLC48A1-203ENST00000461620 CLTCQ00610 1675 aaKnown RBP23.64■■□□□ 1.37
SLC48A1-203ENST00000461620 PZPP20742 1482 aa23.62■■□□□ 1.37
SLC48A1-203ENST00000461620 CEBPAP49715 358 aaPredicted RBP23.62■■□□□ 1.37
SLC48A1-203ENST00000461620 TRIM52Q96A61 297 aa23.58■■□□□ 1.37
SLC48A1-203ENST00000461620 RPRD2Q5VT52 1461 aaKnown RBP23.57■■□□□ 1.36
SLC48A1-203ENST00000461620 C3P01024 1663 aa23.57■■□□□ 1.36
SLC48A1-203ENST00000461620 PLPPR3Q6T4P5 718 aa23.56■■□□□ 1.36
SLC48A1-203ENST00000461620 SETD1BQ9UPS6 1966 aaKnown RBP23.56■■□□□ 1.36
SLC48A1-203ENST00000461620 IQGAP3Q86VI3 1631 aa23.55■■□□□ 1.36
SLC48A1-203ENST00000461620 CAMSAP1Q5T5Y3 1602 aa23.54■■□□□ 1.36
SLC48A1-203ENST00000461620 RAB3GAP2Q9H2M9 1393 aa23.53■■□□□ 1.36
SLC48A1-203ENST00000461620 EFCAB6Q5THR3 1501 aa23.53■■□□□ 1.36
SLC48A1-203ENST00000461620 TET3O43151 1660 aa23.52■■□□□ 1.36
SLC48A1-203ENST00000461620 CEP152O94986 1710 aa23.52■■□□□ 1.36
SLC48A1-203ENST00000461620 TNRQ92752 1358 aa23.52■■□□□ 1.36
SLC48A1-203ENST00000461620 UHRF1BP1Q6BDS2 1440 aa23.5■■□□□ 1.35
SLC48A1-203ENST00000461620 FBXO31Q5XUX0 539 aaPredicted RBP23.5■■□□□ 1.35
SLC48A1-203ENST00000461620 SLC4A1APQ9BWU0 796 aaKnown RBP23.49■■□□□ 1.35
SLC48A1-203ENST00000461620 ERVK-7P63135 1459 aa23.49■■□□□ 1.35
SLC48A1-203ENST00000461620 SPATA31D1Q6ZQQ2 1576 aa23.48■■□□□ 1.35
SLC48A1-203ENST00000461620 NLRP1Q9C000 1473 aa23.46■■□□□ 1.35
SLC48A1-203ENST00000461620 SLC52A1Q9NWF4 448 aa23.46■■□□□ 1.35
SLC48A1-203ENST00000461620 NOS1P29475 1434 aa23.45■■□□□ 1.34
SLC48A1-203ENST00000461620 MPHOSPH9Q99550 1183 aa23.45■■□□□ 1.34
SLC48A1-203ENST00000461620 PKD2Q13563 968 aa23.43■■□□□ 1.34
SLC48A1-203ENST00000461620 PREX1Q8TCU6 1659 aa23.42■■□□□ 1.34
SLC48A1-203ENST00000461620 A2ML1A8K2U0 1454 aa23.4■■□□□ 1.34
SLC48A1-203ENST00000461620 LMTK3Q96Q04 1460 aa23.38■■□□□ 1.33
SLC48A1-203ENST00000461620 THEMISQ8N1K5 641 aaPredicted RBP23.38■■□□□ 1.33
SLC48A1-203ENST00000461620 PTPRTO14522 1441 aa23.38■■□□□ 1.33
SLC48A1-203ENST00000461620 E9PCH4 1651 aa23.36■■□□□ 1.33
SLC48A1-203ENST00000461620 MYO3AQ8NEV4 1616 aa23.35■■□□□ 1.33
SLC48A1-203ENST00000461620 IDI1Q13907 227 aa23.35■■□□□ 1.33
SLC48A1-203ENST00000461620 CEP170BQ9Y4F5 1589 aaPredicted RBP23.34■■□□□ 1.33
SLC48A1-203ENST00000461620 STAG3Q9UJ98 1225 aa23.33■■□□□ 1.33
SLC48A1-203ENST00000461620 ZNF142P52746 1687 aaPredicted RBP23.32■■□□□ 1.32
SLC48A1-203ENST00000461620 SYNMO15061 1565 aa23.31■■□□□ 1.32
SLC48A1-203ENST00000461620 UGGT1Q9NYU2 1555 aa23.31■■□□□ 1.32
SLC48A1-203ENST00000461620 CFAP65Q6ZU64 1925 aaKnown RBP23.29■■□□□ 1.32
SLC48A1-203ENST00000461620 TRPM2O94759 1503 aa23.28■■□□□ 1.32
SLC48A1-203ENST00000461620 PCGF6Q9BYE7 350 aa23.28■■□□□ 1.32
SLC48A1-203ENST00000461620 PLA2R1Q13018 1463 aa23.28■■□□□ 1.32
SLC48A1-203ENST00000461620 HDGFP51858 240 aaKnown RBP23.27■■□□□ 1.32
SLC48A1-203ENST00000461620 KDM5AP29375 1690 aaKnown RBP23.26■■□□□ 1.31
SLC48A1-203ENST00000461620 HSPA2P54652 639 aa23.26■■□□□ 1.31
SLC48A1-203ENST00000461620 DMRT2Q9Y5R5 561 aa23.26■■□□□ 1.31
SLC48A1-203ENST00000461620 SPHKAPQ2M3C7 1700 aa23.25■■□□□ 1.31
SLC48A1-203ENST00000461620 PIK3C2BO00750 1634 aa23.25■■□□□ 1.31
SLC48A1-203ENST00000461620 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
SLC48A1-203ENST00000461620 CCDC144AA2RUR9 1427 aa23.23■■□□□ 1.31
SLC48A1-203ENST00000461620 FOXD1Q16676 465 aa23.22■■□□□ 1.31
SLC48A1-203ENST00000461620 EID1Q9Y6B2 187 aa23.21■■□□□ 1.31
SLC48A1-203ENST00000461620 ADGRB3O60242 1522 aa23.21■■□□□ 1.31
SLC48A1-203ENST00000461620 ANKRD30BQ9BXX2 1392 aa23.2■■□□□ 1.3
SLC48A1-203ENST00000461620 TMEM2Q9UHN6 1383 aa23.19■■□□□ 1.3
SLC48A1-203ENST00000461620 CHGAP10645 457 aaKnown RBP23.19■■□□□ 1.3
SLC48A1-203ENST00000461620 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.19■■□□□ 1.3
SLC48A1-203ENST00000461620 UBR1Q8IWV7 1749 aa23.19■■□□□ 1.3
SLC48A1-203ENST00000461620 SLIT1O75093 1534 aa23.18■■□□□ 1.3
SLC48A1-203ENST00000461620 ARHGAP23Q9P227 1491 aa23.17■■□□□ 1.3
SLC48A1-203ENST00000461620 RPGRIP1LQ68CZ1 1315 aa23.15■■□□□ 1.3
SLC48A1-203ENST00000461620 TMEM131LA2VDJ0 1609 aa23.15■■□□□ 1.3
SLC48A1-203ENST00000461620 TXNDC2Q86VQ3 553 aa23.14■■□□□ 1.29
SLC48A1-203ENST00000461620 CLTCL1P53675 1640 aa23.14■■□□□ 1.29
SLC48A1-203ENST00000461620 DHX57Q6P158 1386 aaKnown RBP23.13■■□□□ 1.29
SLC48A1-203ENST00000461620 NEURL4Q96JN8 1562 aa23.12■■□□□ 1.29
SLC48A1-203ENST00000461620 SCAF11Q99590 1463 aaKnown RBP23.11■■□□□ 1.29
SLC48A1-203ENST00000461620 ZNF326Q5BKZ1 582 aaKnown RBP23.11■■□□□ 1.29
SLC48A1-203ENST00000461620 MED14O60244 1454 aa23.11■■□□□ 1.29
SLC48A1-203ENST00000461620 NCKAP5LQ9HCH0 1330 aa23.1■■□□□ 1.29
SLC48A1-203ENST00000461620 RIMS2Q9UQ26 1411 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms