RNA–Protein interactions for RNA: ENST00000461448.5

SNHG12-201, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-201ENST00000461448 ESF1Q9H501 851 aaKnown RBP29.15■■■□□ 2.26
SNHG12-201ENST00000461448 ACIN1Q9UKV3 1341 aaKnown RBP29.14■■■□□ 2.26
SNHG12-201ENST00000461448 RNF17Q9BXT8 1623 aaKnown RBP29.14■■■□□ 2.25
SNHG12-201ENST00000461448 RAB3GAP2Q9H2M9 1393 aa29.12■■■□□ 2.25
SNHG12-201ENST00000461448 PPP6R1Q9UPN7 881 aa29.12■■■□□ 2.25
SNHG12-201ENST00000461448 KANK1Q14678 1352 aa29.12■■■□□ 2.25
SNHG12-201ENST00000461448 TRIM52Q96A61 297 aa29.11■■■□□ 2.25
SNHG12-201ENST00000461448 WASHC2CQ9Y4E1 1318 aa29.11■■■□□ 2.25
SNHG12-201ENST00000461448 MROH1Q8NDA8 1641 aa29.09■■■□□ 2.25
SNHG12-201ENST00000461448 DEPDC5O75140 1603 aa29.09■■■□□ 2.25
SNHG12-201ENST00000461448 HRCP23327 699 aa29.08■■■□□ 2.25
SNHG12-201ENST00000461448 NUP155O75694 1391 aa29.07■■■□□ 2.24
SNHG12-201ENST00000461448 PRDM15P57071 1507 aaPredicted RBP29.07■■■□□ 2.24
SNHG12-201ENST00000461448 ADAMTSL3P82987 1691 aa29.06■■■□□ 2.24
SNHG12-201ENST00000461448 UNC13BO14795 1591 aa29.06■■■□□ 2.24
SNHG12-201ENST00000461448 KDM4FA0A1W2PPD8 638 aa29.05■■■□□ 2.24
SNHG12-201ENST00000461448 MADDQ8WXG6 1647 aa29.05■■■□□ 2.24
SNHG12-201ENST00000461448 KDM5DQ9BY66 1539 aa29.03■■■□□ 2.24
SNHG12-201ENST00000461448 FER1L4A9Z1Z3 1794 aa29.02■■■□□ 2.24
SNHG12-201ENST00000461448 CNTLNQ9NXG0 1405 aa29.01■■■□□ 2.24
SNHG12-201ENST00000461448 ABCC3O15438 1527 aa29■■■□□ 2.23
SNHG12-201ENST00000461448 CLTCQ00610 1675 aaKnown RBP28.99■■■□□ 2.23
SNHG12-201ENST00000461448 VWDEQ8N2E2 1590 aa28.99■■■□□ 2.23
SNHG12-201ENST00000461448 FAM135AQ9P2D6 1515 aa28.99■■■□□ 2.23
SNHG12-201ENST00000461448 PLPPR3Q6T4P5 718 aa28.98■■■□□ 2.23
SNHG12-201ENST00000461448 RIMS1Q86UR5 1692 aaKnown RBP28.97■■■□□ 2.23
SNHG12-201ENST00000461448 CEP152O94986 1710 aa28.96■■■□□ 2.23
SNHG12-201ENST00000461448 ZC3H13Q5T200 1668 aaKnown RBP28.95■■■□□ 2.23
SNHG12-201ENST00000461448 ZMYM3Q14202 1370 aa28.95■■■□□ 2.22
SNHG12-201ENST00000461448 IQGAP3Q86VI3 1631 aa28.95■■■□□ 2.22
SNHG12-201ENST00000461448 LMTK2Q8IWU2 1503 aa28.93■■■□□ 2.22
SNHG12-201ENST00000461448 CEBPAP49715 358 aaPredicted RBP28.93■■■□□ 2.22
SNHG12-201ENST00000461448 SLC4A1APQ9BWU0 796 aaKnown RBP28.93■■■□□ 2.22
SNHG12-201ENST00000461448 PZPP20742 1482 aa28.9■■■□□ 2.22
SNHG12-201ENST00000461448 PTPRMP28827 1452 aa28.9■■■□□ 2.22
SNHG12-201ENST00000461448 CAMSAP1Q5T5Y3 1602 aa28.89■■■□□ 2.22
SNHG12-201ENST00000461448 MPHOSPH9Q99550 1183 aa28.89■■■□□ 2.22
SNHG12-201ENST00000461448 MROH2AA6NES4 1674 aa28.89■■■□□ 2.22
SNHG12-201ENST00000461448 TET3O43151 1660 aa28.86■■■□□ 2.21
SNHG12-201ENST00000461448 PKD2Q13563 968 aa28.86■■■□□ 2.21
SNHG12-201ENST00000461448 EFCAB6Q5THR3 1501 aa28.86■■■□□ 2.21
SNHG12-201ENST00000461448 FBXO31Q5XUX0 539 aaPredicted RBP28.84■■■□□ 2.21
SNHG12-201ENST00000461448 ARHGAP31Q2M1Z3 1444 aa28.84■■■□□ 2.21
SNHG12-201ENST00000461448 C3P01024 1663 aa28.84■■■□□ 2.21
SNHG12-201ENST00000461448 NPATQ14207 1427 aa28.83■■■□□ 2.21
SNHG12-201ENST00000461448 FOXD1Q16676 465 aa28.79■■■□□ 2.2
SNHG12-201ENST00000461448 E9PCH4 1651 aa28.78■■■□□ 2.2
SNHG12-201ENST00000461448 RPRD2Q5VT52 1461 aaKnown RBP28.77■■■□□ 2.2
SNHG12-201ENST00000461448 ERVK-7P63135 1459 aa28.74■■■□□ 2.19
SNHG12-201ENST00000461448 CFAP65Q6ZU64 1925 aaKnown RBP28.73■■■□□ 2.19
SNHG12-201ENST00000461448 TNRQ92752 1358 aa28.72■■■□□ 2.19
SNHG12-201ENST00000461448 PREX1Q8TCU6 1659 aa28.71■■■□□ 2.19
SNHG12-201ENST00000461448 SPATA31D1Q6ZQQ2 1576 aa28.7■■■□□ 2.18
SNHG12-201ENST00000461448 NOS1P29475 1434 aa28.69■■■□□ 2.18
SNHG12-201ENST00000461448 DHX57Q6P158 1386 aaKnown RBP28.68■■■□□ 2.18
SNHG12-201ENST00000461448 PTPRTO14522 1441 aa28.65■■■□□ 2.18
SNHG12-201ENST00000461448 AEBP2Q6ZN18 517 aaPredicted RBP28.64■■■□□ 2.18
SNHG12-201ENST00000461448 SYNMO15061 1565 aa28.63■■■□□ 2.17
SNHG12-201ENST00000461448 PLA2R1Q13018 1463 aa28.62■■■□□ 2.17
SNHG12-201ENST00000461448 SPHKAPQ2M3C7 1700 aa28.62■■■□□ 2.17
SNHG12-201ENST00000461448 SLC52A1Q9NWF4 448 aa28.61■■■□□ 2.17
SNHG12-201ENST00000461448 IDI1Q13907 227 aa28.6■■■□□ 2.17
SNHG12-201ENST00000461448 TRPM2O94759 1503 aa28.59■■■□□ 2.17
SNHG12-201ENST00000461448 CCER1Q8TC90 406 aaPredicted RBP28.58■■■□□ 2.17
SNHG12-201ENST00000461448 UHRF1BP1Q6BDS2 1440 aa28.58■■■□□ 2.17
SNHG12-201ENST00000461448 ANKRD30BQ9BXX2 1392 aa28.58■■■□□ 2.17
SNHG12-201ENST00000461448 UGGT1Q9NYU2 1555 aa28.57■■■□□ 2.16
SNHG12-201ENST00000461448 SETD1BQ9UPS6 1966 aaKnown RBP28.57■■■□□ 2.16
SNHG12-201ENST00000461448 NLRP1Q9C000 1473 aa28.57■■■□□ 2.16
SNHG12-201ENST00000461448 MYO3AQ8NEV4 1616 aa28.56■■■□□ 2.16
SNHG12-201ENST00000461448 CCDC144AA2RUR9 1427 aa28.54■■■□□ 2.16
SNHG12-201ENST00000461448 CHGAP10645 457 aaKnown RBP28.54■■■□□ 2.16
SNHG12-201ENST00000461448 STAG3Q9UJ98 1225 aa28.54■■■□□ 2.16
SNHG12-201ENST00000461448 CLSPNQ9HAW4 1339 aa28.54■■■□□ 2.16
SNHG12-201ENST00000461448 A2ML1A8K2U0 1454 aa28.51■■■□□ 2.15
SNHG12-201ENST00000461448 CLTCL1P53675 1640 aa28.51■■■□□ 2.15
SNHG12-201ENST00000461448 PIK3C2BO00750 1634 aa28.5■■■□□ 2.15
SNHG12-201ENST00000461448 CEP170BQ9Y4F5 1589 aaPredicted RBP28.49■■■□□ 2.15
SNHG12-201ENST00000461448 THEMISQ8N1K5 641 aaPredicted RBP28.44■■■□□ 2.14
SNHG12-201ENST00000461448 ZNF142P52746 1687 aaPredicted RBP28.44■■■□□ 2.14
SNHG12-201ENST00000461448 SIN3AQ96ST3 1273 aa28.43■■■□□ 2.14
SNHG12-201ENST00000461448 LMTK3Q96Q04 1460 aa28.43■■■□□ 2.14
SNHG12-201ENST00000461448 ADGRB3O60242 1522 aa28.42■■■□□ 2.14
SNHG12-201ENST00000461448 HSPA2P54652 639 aa28.41■■■□□ 2.14
SNHG12-201ENST00000461448 NEUROD1Q13562 356 aa28.41■■■□□ 2.14
SNHG12-201ENST00000461448 ZNF326Q5BKZ1 582 aaKnown RBP28.4■■■□□ 2.14
SNHG12-201ENST00000461448 UBR1Q8IWV7 1749 aa28.4■■■□□ 2.14
SNHG12-201ENST00000461448 TMEM131LA2VDJ0 1609 aa28.4■■■□□ 2.14
SNHG12-201ENST00000461448 RGL3Q3MIN7 710 aa28.39■■■□□ 2.13
SNHG12-201ENST00000461448 KIF1BO60333 1816 aa28.38■■■□□ 2.13
SNHG12-201ENST00000461448 KDM5AP29375 1690 aaKnown RBP28.35■■■□□ 2.13
SNHG12-201ENST00000461448 SPATA31E1Q6ZUB1 1445 aa28.34■■■□□ 2.13
SNHG12-201ENST00000461448 TMEM2Q9UHN6 1383 aa28.33■■■□□ 2.13
SNHG12-201ENST00000461448 MYO5BQ9ULV0 1848 aa28.32■■■□□ 2.12
SNHG12-201ENST00000461448 EID1Q9Y6B2 187 aa28.29■■■□□ 2.12
SNHG12-201ENST00000461448 RIMS2Q9UQ26 1411 aa28.29■■■□□ 2.12
SNHG12-201ENST00000461448 HDGFP51858 240 aaKnown RBP28.29■■■□□ 2.12
SNHG12-201ENST00000461448 NUTM2DQ5VT03 806 aaPredicted RBP28.29■■■□□ 2.12
SNHG12-201ENST00000461448 TXNDC2Q86VQ3 553 aa28.29■■■□□ 2.12
SNHG12-201ENST00000461448 ANKLE2Q86XL3 938 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms