RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
TOP3A-202ENST00000461127 PHF23Q9BUL5 403 aaPredicted RBP27.96■■■□□ 2.07
TOP3A-202ENST00000461127 ANKLE2Q86XL3 938 aa27.94■■■□□ 2.06
TOP3A-202ENST00000461127 NEURL4Q96JN8 1562 aa27.94■■■□□ 2.06
TOP3A-202ENST00000461127 RTEL1-TNFRSF6BF6WH68 1400 aa27.93■■■□□ 2.06
TOP3A-202ENST00000461127 DHX29Q7Z478 1369 aaKnown RBP27.93■■■□□ 2.06
TOP3A-202ENST00000461127 FBXO31Q5XUX0 539 aaPredicted RBP27.91■■■□□ 2.06
TOP3A-202ENST00000461127 THEMISQ8N1K5 641 aaPredicted RBP27.9■■■□□ 2.06
TOP3A-202ENST00000461127 ZNF644Q9H582 1327 aaPredicted RBP27.9■■■□□ 2.06
TOP3A-202ENST00000461127 PZPP20742 1482 aa27.89■■■□□ 2.06
TOP3A-202ENST00000461127 FAM135AQ9P2D6 1515 aa27.89■■■□□ 2.06
TOP3A-202ENST00000461127 KIF3BO15066 747 aa27.89■■■□□ 2.06
TOP3A-202ENST00000461127 MBD5Q9P267 1494 aa27.88■■■□□ 2.05
TOP3A-202ENST00000461127 KDM5DQ9BY66 1539 aa27.87■■■□□ 2.05
TOP3A-202ENST00000461127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.87■■■□□ 2.05
TOP3A-202ENST00000461127 WASHC2CQ9Y4E1 1318 aa27.87■■■□□ 2.05
TOP3A-202ENST00000461127 TIAM1Q13009 1591 aa27.85■■■□□ 2.05
TOP3A-202ENST00000461127 VWDEQ8N2E2 1590 aa27.84■■■□□ 2.05
TOP3A-202ENST00000461127 NPHP4O75161 1426 aaPredicted RBP27.84■■■□□ 2.05
TOP3A-202ENST00000461127 NLRP1Q9C000 1473 aa27.83■■■□□ 2.05
TOP3A-202ENST00000461127 MIA2Q96PC5 1412 aa27.82■■■□□ 2.04
TOP3A-202ENST00000461127 UGGT1Q9NYU2 1555 aa27.82■■■□□ 2.04
TOP3A-202ENST00000461127 MED14O60244 1454 aa27.81■■■□□ 2.04
TOP3A-202ENST00000461127 DEPDC5O75140 1603 aa27.81■■■□□ 2.04
TOP3A-202ENST00000461127 EHBP1L1Q8N3D4 1523 aa27.8■■■□□ 2.04
TOP3A-202ENST00000461127 CCDC141Q6ZP82 1450 aa27.77■■■□□ 2.04
TOP3A-202ENST00000461127 RSPH4AQ5TD94 716 aa27.77■■■□□ 2.04
TOP3A-202ENST00000461127 CEP162Q5TB80 1403 aa27.75■■■□□ 2.03
TOP3A-202ENST00000461127 IQGAP1P46940 1657 aa27.75■■■□□ 2.03
TOP3A-202ENST00000461127 ALKQ9UM73 1620 aa27.74■■■□□ 2.03
TOP3A-202ENST00000461127 SENP3Q9H4L4 574 aaPredicted RBP27.73■■■□□ 2.03
TOP3A-202ENST00000461127 LRRC7Q96NW7 1537 aa27.69■■■□□ 2.02
TOP3A-202ENST00000461127 RNF17Q9BXT8 1623 aaKnown RBP27.69■■■□□ 2.02
TOP3A-202ENST00000461127 CAMSAP2Q08AD1 1489 aa27.68■■■□□ 2.02
TOP3A-202ENST00000461127 SYNMO15061 1565 aa27.68■■■□□ 2.02
TOP3A-202ENST00000461127 TSPY4P0CV99 314 aa27.67■■■□□ 2.02
TOP3A-202ENST00000461127 TSPY10P0CW01 314 aa27.67■■■□□ 2.02
TOP3A-202ENST00000461127 STRCP1A6NGW2 1772 aa27.64■■■□□ 2.02
TOP3A-202ENST00000461127 NCOA2Q15596 1464 aa27.61■■■□□ 2.01
TOP3A-202ENST00000461127 ZC3H13Q5T200 1668 aaKnown RBP27.6■■■□□ 2.01
TOP3A-202ENST00000461127 ARHGEF5Q12774 1597 aa27.6■■■□□ 2.01
TOP3A-202ENST00000461127 ABCC3O15438 1527 aa27.58■■■□□ 2.01
TOP3A-202ENST00000461127 ERVK-7P63135 1459 aa27.57■■■□□ 2
TOP3A-202ENST00000461127 SCAF11Q99590 1463 aaKnown RBP27.55■■■□□ 2
TOP3A-202ENST00000461127 RGS17Q9UGC6 210 aaPredicted RBP27.53■■■□□ 2
TOP3A-202ENST00000461127 UBR1Q8IWV7 1749 aa27.51■■□□□ 1.99
TOP3A-202ENST00000461127 EIF2AK4Q9P2K8 1649 aaKnown RBP27.5■■□□□ 1.99
TOP3A-202ENST00000461127 TXNDC2Q86VQ3 553 aa27.5■■□□□ 1.99
TOP3A-202ENST00000461127 CFAP65Q6ZU64 1925 aaKnown RBP27.48■■□□□ 1.99
TOP3A-202ENST00000461127 EID1Q9Y6B2 187 aa27.47■■□□□ 1.99
TOP3A-202ENST00000461127 MAST1Q9Y2H9 1570 aa27.47■■□□□ 1.99
TOP3A-202ENST00000461127 LTKP29376 864 aa27.45■■□□□ 1.98
TOP3A-202ENST00000461127 SLIT1O75093 1534 aa27.45■■□□□ 1.98
TOP3A-202ENST00000461127 FAM135BQ49AJ0 1406 aa27.44■■□□□ 1.98
TOP3A-202ENST00000461127 CEP152O94986 1710 aa27.44■■□□□ 1.98
TOP3A-202ENST00000461127 ARHGAP23Q9P227 1491 aa27.44■■□□□ 1.98
TOP3A-202ENST00000461127 MROH1Q8NDA8 1641 aa27.41■■□□□ 1.98
TOP3A-202ENST00000461127 XIRP1Q702N8 1843 aaKnown RBP27.41■■□□□ 1.98
TOP3A-202ENST00000461127 POTEAQ6S8J7 498 aa27.37■■□□□ 1.97
TOP3A-202ENST00000461127 STAG3Q9UJ98 1225 aa27.37■■□□□ 1.97
TOP3A-202ENST00000461127 DUOX2Q9NRD8 1548 aa27.36■■□□□ 1.97
TOP3A-202ENST00000461127 ARHGAP31Q2M1Z3 1444 aa27.36■■□□□ 1.97
TOP3A-202ENST00000461127 TMEM94Q12767 1356 aa27.34■■□□□ 1.97
TOP3A-202ENST00000461127 TMEM2Q9UHN6 1383 aa27.33■■□□□ 1.97
TOP3A-202ENST00000461127 LRRC9Q6ZRR7 1453 aa27.32■■□□□ 1.96
TOP3A-202ENST00000461127 KCNA6P17658 529 aa27.3■■□□□ 1.96
TOP3A-202ENST00000461127 MYOM3Q5VTT5 1437 aa27.3■■□□□ 1.96
TOP3A-202ENST00000461127 PRDM15P57071 1507 aaPredicted RBP27.3■■□□□ 1.96
TOP3A-202ENST00000461127 PIK3C2BO00750 1634 aa27.3■■□□□ 1.96
TOP3A-202ENST00000461127 ROBO1Q9Y6N7 1651 aa27.3■■□□□ 1.96
TOP3A-202ENST00000461127 PROSER2Q86WR7 435 aaPredicted RBP27.29■■□□□ 1.96
TOP3A-202ENST00000461127 KANK1Q14678 1352 aa27.26■■□□□ 1.95
TOP3A-202ENST00000461127 KIF15Q9NS87 1388 aa27.26■■□□□ 1.95
TOP3A-202ENST00000461127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.26■■□□□ 1.95
TOP3A-202ENST00000461127 ERBINQ96RT1 1412 aa27.25■■□□□ 1.95
TOP3A-202ENST00000461127 EFCAB6Q5THR3 1501 aa27.25■■□□□ 1.95
TOP3A-202ENST00000461127 KDM5AP29375 1690 aaKnown RBP27.24■■□□□ 1.95
TOP3A-202ENST00000461127 SLC26A8Q96RN1 970 aa27.23■■□□□ 1.95
TOP3A-202ENST00000461127 MAP3K1Q13233 1512 aa27.22■■□□□ 1.95
TOP3A-202ENST00000461127 RRP7BPQ9NSQ0 103 aa27.21■■□□□ 1.95
TOP3A-202ENST00000461127 MSH6P52701 1360 aa27.21■■□□□ 1.95
TOP3A-202ENST00000461127 NKTRP30414 1462 aaKnown RBP27.2■■□□□ 1.95
TOP3A-202ENST00000461127 RBM33Q96EV2 1170 aaKnown RBP27.2■■□□□ 1.94
TOP3A-202ENST00000461127 IDI1Q13907 227 aa27.19■■□□□ 1.94
TOP3A-202ENST00000461127 JCADQ9P266 1359 aa27.18■■□□□ 1.94
TOP3A-202ENST00000461127 TET3O43151 1660 aa27.17■■□□□ 1.94
TOP3A-202ENST00000461127 VPS8Q8N3P4 1428 aa27.17■■□□□ 1.94
TOP3A-202ENST00000461127 BCANQ96GW7 911 aa27.17■■□□□ 1.94
TOP3A-202ENST00000461127 SLAIN2Q9P270 581 aa27.16■■□□□ 1.94
TOP3A-202ENST00000461127 SETD1AO15047 1707 aaKnown RBP27.16■■□□□ 1.94
TOP3A-202ENST00000461127 PHLPP1O60346 1717 aa27.16■■□□□ 1.94
TOP3A-202ENST00000461127 KANK4Q5T7N3 995 aaPredicted RBP27.15■■□□□ 1.94
TOP3A-202ENST00000461127 NWD1Q149M9 1564 aa27.14■■□□□ 1.94
TOP3A-202ENST00000461127 CROCC2H7BZ55 1655 aa27.12■■□□□ 1.93
TOP3A-202ENST00000461127 ABCC5O15440 1437 aa27.12■■□□□ 1.93
TOP3A-202ENST00000461127 LMTK2Q8IWU2 1503 aa27.11■■□□□ 1.93
TOP3A-202ENST00000461127 ADGRB3O60242 1522 aa27.1■■□□□ 1.93
TOP3A-202ENST00000461127 SLC52A1Q9NWF4 448 aa27.09■■□□□ 1.93
TOP3A-202ENST00000461127 MEX3CQ5U5Q3 659 aaKnown RBP27.06■■□□□ 1.92
TOP3A-202ENST00000461127 NOS1P29475 1434 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms