RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 EIF2AK4Q9P2K8 1649 aaKnown RBP12.51□□□□□ -0.41
SND1-202ENST00000461056 CHIC2Q9UKJ5 165 aa12.51□□□□□ -0.41
SND1-202ENST00000461056 RRP7BPQ9NSQ0 103 aa12.5□□□□□ -0.41
SND1-202ENST00000461056 MADDQ8WXG6 1647 aa12.5□□□□□ -0.41
SND1-202ENST00000461056 VWDEQ8N2E2 1590 aa12.49□□□□□ -0.41
SND1-202ENST00000461056 PRDM15P57071 1507 aaPredicted RBP12.49□□□□□ -0.41
SND1-202ENST00000461056 KDM5DQ9BY66 1539 aa12.49□□□□□ -0.41
SND1-202ENST00000461056 FAM135AQ9P2D6 1515 aa12.49□□□□□ -0.41
SND1-202ENST00000461056 HFM1A2PYH4 1435 aa12.49□□□□□ -0.41
SND1-202ENST00000461056 NAIPQ13075 1403 aa12.49□□□□□ -0.41
SND1-202ENST00000461056 PPP4R3CPQ6ZMV5 832 aa12.49□□□□□ -0.41
SND1-202ENST00000461056 DEPDC5O75140 1603 aa12.48□□□□□ -0.41
SND1-202ENST00000461056 ANKRD50Q9ULJ7 1429 aa12.48□□□□□ -0.41
SND1-202ENST00000461056 PTPRMP28827 1452 aa12.47□□□□□ -0.41
SND1-202ENST00000461056 ARID4BQ4LE39 1312 aaPredicted RBP12.47□□□□□ -0.41
SND1-202ENST00000461056 MYT1LQ9UL68 1186 aa12.47□□□□□ -0.41
SND1-202ENST00000461056 ABCC3O15438 1527 aa12.46□□□□□ -0.42
SND1-202ENST00000461056 KIF3BO15066 747 aa12.45□□□□□ -0.42
SND1-202ENST00000461056 LMTK2Q8IWU2 1503 aa12.45□□□□□ -0.42
SND1-202ENST00000461056 CNTLNQ9NXG0 1405 aa12.45□□□□□ -0.42
SND1-202ENST00000461056 UNC13BO14795 1591 aa12.43□□□□□ -0.42
SND1-202ENST00000461056 ITGAEP38570 1179 aa12.43□□□□□ -0.42
SND1-202ENST00000461056 MLECQ14165 292 aa12.43□□□□□ -0.42
SND1-202ENST00000461056 GCC2Q8IWJ2 1684 aa12.42□□□□□ -0.42
SND1-202ENST00000461056 FER1L4A9Z1Z3 1794 aa12.41□□□□□ -0.42
SND1-202ENST00000461056 MROH2AA6NES4 1674 aa12.41□□□□□ -0.42
SND1-202ENST00000461056 RIMS1Q86UR5 1692 aaKnown RBP12.41□□□□□ -0.42
SND1-202ENST00000461056 ARHGAP31Q2M1Z3 1444 aa12.4□□□□□ -0.42
SND1-202ENST00000461056 GGT6Q6P531 493 aa12.4□□□□□ -0.42
SND1-202ENST00000461056 ZMYM3Q14202 1370 aa12.4□□□□□ -0.42
SND1-202ENST00000461056 PZPP20742 1482 aa12.4□□□□□ -0.43
SND1-202ENST00000461056 ZC3H13Q5T200 1668 aaKnown RBP12.38□□□□□ -0.43
SND1-202ENST00000461056 NPATQ14207 1427 aa12.37□□□□□ -0.43
SND1-202ENST00000461056 CLTCQ00610 1675 aaKnown RBP12.37□□□□□ -0.43
SND1-202ENST00000461056 IQGAP3Q86VI3 1631 aa12.37□□□□□ -0.43
SND1-202ENST00000461056 EFCAB6Q5THR3 1501 aa12.37□□□□□ -0.43
SND1-202ENST00000461056 C3P01024 1663 aa12.36□□□□□ -0.43
SND1-202ENST00000461056 CEBPAP49715 358 aaPredicted RBP12.36□□□□□ -0.43
SND1-202ENST00000461056 WASHC2CQ9Y4E1 1318 aa12.36□□□□□ -0.43
SND1-202ENST00000461056 SETD5Q9C0A6 1442 aa12.35□□□□□ -0.43
SND1-202ENST00000461056 SPATA31D1Q6ZQQ2 1576 aa12.35□□□□□ -0.43
SND1-202ENST00000461056 CAMSAP1Q5T5Y3 1602 aa12.34□□□□□ -0.43
SND1-202ENST00000461056 NOS1P29475 1434 aa12.34□□□□□ -0.43
SND1-202ENST00000461056 ERVK-7P63135 1459 aa12.34□□□□□ -0.43
SND1-202ENST00000461056 LMTK3Q96Q04 1460 aa12.33□□□□□ -0.44
SND1-202ENST00000461056 NUP155O75694 1391 aa12.32□□□□□ -0.44
SND1-202ENST00000461056 RAB3GAP2Q9H2M9 1393 aa12.32□□□□□ -0.44
SND1-202ENST00000461056 CEP152O94986 1710 aa12.32□□□□□ -0.44
SND1-202ENST00000461056 FBXO31Q5XUX0 539 aaPredicted RBP12.32□□□□□ -0.44
SND1-202ENST00000461056 RPRD2Q5VT52 1461 aaKnown RBP12.32□□□□□ -0.44
SND1-202ENST00000461056 TET3O43151 1660 aa12.32□□□□□ -0.44
SND1-202ENST00000461056 KANK1Q14678 1352 aa12.31□□□□□ -0.44
SND1-202ENST00000461056 HRCP23327 699 aa12.31□□□□□ -0.44
SND1-202ENST00000461056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.31□□□□□ -0.44
SND1-202ENST00000461056 PTPRTO14522 1441 aa12.3□□□□□ -0.44
SND1-202ENST00000461056 PLA2R1Q13018 1463 aa12.3□□□□□ -0.44
SND1-202ENST00000461056 SYNMO15061 1565 aa12.3□□□□□ -0.44
SND1-202ENST00000461056 TNRQ92752 1358 aa12.29□□□□□ -0.44
SND1-202ENST00000461056 TRIM26Q12899 539 aaPredicted RBP12.28□□□□□ -0.44
SND1-202ENST00000461056 ESF1Q9H501 851 aaKnown RBP12.28□□□□□ -0.44
SND1-202ENST00000461056 MYO3AQ8NEV4 1616 aa12.27□□□□□ -0.44
SND1-202ENST00000461056 E9PCH4 1651 aa12.27□□□□□ -0.45
SND1-202ENST00000461056 PREX1Q8TCU6 1659 aa12.26□□□□□ -0.45
SND1-202ENST00000461056 NLRP1Q9C000 1473 aa12.26□□□□□ -0.45
SND1-202ENST00000461056 ZNF142P52746 1687 aaPredicted RBP12.26□□□□□ -0.45
SND1-202ENST00000461056 UHRF1BP1Q6BDS2 1440 aa12.25□□□□□ -0.45
SND1-202ENST00000461056 A2ML1A8K2U0 1454 aa12.25□□□□□ -0.45
SND1-202ENST00000461056 PIK3C2BO00750 1634 aa12.24□□□□□ -0.45
SND1-202ENST00000461056 CEP170BQ9Y4F5 1589 aaPredicted RBP12.24□□□□□ -0.45
SND1-202ENST00000461056 ACIN1Q9UKV3 1341 aaKnown RBP12.23□□□□□ -0.45
SND1-202ENST00000461056 TRPM2O94759 1503 aa12.22□□□□□ -0.45
SND1-202ENST00000461056 UGGT1Q9NYU2 1555 aa12.22□□□□□ -0.45
SND1-202ENST00000461056 SETD1BQ9UPS6 1966 aaKnown RBP12.21□□□□□ -0.45
SND1-202ENST00000461056 PKD2Q13563 968 aa12.21□□□□□ -0.45
SND1-202ENST00000461056 MPHOSPH9Q99550 1183 aa12.21□□□□□ -0.45
SND1-202ENST00000461056 CNKSR2Q8WXI2 1034 aa12.2□□□□□ -0.46
SND1-202ENST00000461056 ARHGAP23Q9P227 1491 aa12.2□□□□□ -0.46
SND1-202ENST00000461056 IDI1Q13907 227 aa12.19□□□□□ -0.46
SND1-202ENST00000461056 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
SND1-202ENST00000461056 ADGRB3O60242 1522 aa12.18□□□□□ -0.46
SND1-202ENST00000461056 HSPA2P54652 639 aa12.18□□□□□ -0.46
SND1-202ENST00000461056 TRIM52Q96A61 297 aa12.18□□□□□ -0.46
SND1-202ENST00000461056 SLC52A1Q9NWF4 448 aa12.18□□□□□ -0.46
SND1-202ENST00000461056 ANKRD30BQ9BXX2 1392 aa12.18□□□□□ -0.46
SND1-202ENST00000461056 SLIT1O75093 1534 aa12.17□□□□□ -0.46
SND1-202ENST00000461056 KDM5AP29375 1690 aaKnown RBP12.17□□□□□ -0.46
SND1-202ENST00000461056 CLTCL1P53675 1640 aa12.17□□□□□ -0.46
SND1-202ENST00000461056 UBR1Q8IWV7 1749 aa12.17□□□□□ -0.46
SND1-202ENST00000461056 TMEM131LA2VDJ0 1609 aa12.16□□□□□ -0.46
SND1-202ENST00000461056 ZFYVE9O95405 1425 aa12.16□□□□□ -0.46
SND1-202ENST00000461056 SPHKAPQ2M3C7 1700 aa12.16□□□□□ -0.46
SND1-202ENST00000461056 NEURL4Q96JN8 1562 aa12.15□□□□□ -0.46
SND1-202ENST00000461056 SPATA31E1Q6ZUB1 1445 aa12.14□□□□□ -0.47
SND1-202ENST00000461056 DHX57Q6P158 1386 aaKnown RBP12.14□□□□□ -0.47
SND1-202ENST00000461056 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
SND1-202ENST00000461056 STRCQ7RTU9 1775 aa12.13□□□□□ -0.47
SND1-202ENST00000461056 MED14O60244 1454 aa12.13□□□□□ -0.47
SND1-202ENST00000461056 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
SND1-202ENST00000461056 THEMISQ8N1K5 641 aaPredicted RBP12.11□□□□□ -0.47
SND1-202ENST00000461056 LTKP29376 864 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms