RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
ERGIC3-211ENST00000461043 FAM135AQ9P2D6 1515 aa18.53■□□□□ 0.56
ERGIC3-211ENST00000461043 GGT6Q6P531 493 aa18.5■□□□□ 0.55
ERGIC3-211ENST00000461043 MROH2AA6NES4 1674 aa18.5■□□□□ 0.55
ERGIC3-211ENST00000461043 DEPDC5O75140 1603 aa18.49■□□□□ 0.55
ERGIC3-211ENST00000461043 PRDM15P57071 1507 aaPredicted RBP18.49■□□□□ 0.55
ERGIC3-211ENST00000461043 KDM5DQ9BY66 1539 aa18.48■□□□□ 0.55
ERGIC3-211ENST00000461043 ANKRD50Q9ULJ7 1429 aa18.48■□□□□ 0.55
ERGIC3-211ENST00000461043 CLTCQ00610 1675 aaKnown RBP18.47■□□□□ 0.55
ERGIC3-211ENST00000461043 ITGAEP38570 1179 aa18.47■□□□□ 0.55
ERGIC3-211ENST00000461043 C3P01024 1663 aa18.47■□□□□ 0.55
ERGIC3-211ENST00000461043 ABCC3O15438 1527 aa18.45■□□□□ 0.54
ERGIC3-211ENST00000461043 ZMYM3Q14202 1370 aa18.44■□□□□ 0.54
ERGIC3-211ENST00000461043 VWDEQ8N2E2 1590 aa18.44■□□□□ 0.54
ERGIC3-211ENST00000461043 ESF1Q9H501 851 aaKnown RBP18.44■□□□□ 0.54
ERGIC3-211ENST00000461043 ZC3H13Q5T200 1668 aaKnown RBP18.44■□□□□ 0.54
ERGIC3-211ENST00000461043 CEBPAP49715 358 aaPredicted RBP18.43■□□□□ 0.54
ERGIC3-211ENST00000461043 NAIPQ13075 1403 aa18.41■□□□□ 0.54
ERGIC3-211ENST00000461043 WASHC2CQ9Y4E1 1318 aa18.41■□□□□ 0.54
ERGIC3-211ENST00000461043 HFM1A2PYH4 1435 aa18.4■□□□□ 0.54
ERGIC3-211ENST00000461043 LMTK2Q8IWU2 1503 aa18.4■□□□□ 0.54
ERGIC3-211ENST00000461043 UNC13BO14795 1591 aa18.4■□□□□ 0.54
ERGIC3-211ENST00000461043 NPATQ14207 1427 aa18.4■□□□□ 0.54
ERGIC3-211ENST00000461043 GCC2Q8IWJ2 1684 aa18.39■□□□□ 0.53
ERGIC3-211ENST00000461043 PZPP20742 1482 aa18.39■□□□□ 0.53
ERGIC3-211ENST00000461043 CEP152O94986 1710 aa18.37■□□□□ 0.53
ERGIC3-211ENST00000461043 ARHGAP31Q2M1Z3 1444 aa18.36■□□□□ 0.53
ERGIC3-211ENST00000461043 CAMSAP1Q5T5Y3 1602 aa18.36■□□□□ 0.53
ERGIC3-211ENST00000461043 LMTK3Q96Q04 1460 aa18.36■□□□□ 0.53
ERGIC3-211ENST00000461043 KANK1Q14678 1352 aa18.35■□□□□ 0.53
ERGIC3-211ENST00000461043 PLPPR3Q6T4P5 718 aa18.35■□□□□ 0.53
ERGIC3-211ENST00000461043 PREX1Q8TCU6 1659 aa18.34■□□□□ 0.53
ERGIC3-211ENST00000461043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.33■□□□□ 0.522e-10■■□□□ 13.5
ERGIC3-211ENST00000461043 EFCAB6Q5THR3 1501 aa18.32■□□□□ 0.52
ERGIC3-211ENST00000461043 IQGAP3Q86VI3 1631 aa18.31■□□□□ 0.52
ERGIC3-211ENST00000461043 SPATA31D1Q6ZQQ2 1576 aa18.31■□□□□ 0.52
ERGIC3-211ENST00000461043 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
ERGIC3-211ENST00000461043 FBXO31Q5XUX0 539 aaPredicted RBP18.3■□□□□ 0.52
ERGIC3-211ENST00000461043 ERVK-7P63135 1459 aa18.3■□□□□ 0.52
ERGIC3-211ENST00000461043 MYO3AQ8NEV4 1616 aa18.29■□□□□ 0.52
ERGIC3-211ENST00000461043 UHRF1BP1Q6BDS2 1440 aa18.29■□□□□ 0.52
ERGIC3-211ENST00000461043 TET3O43151 1660 aa18.28■□□□□ 0.52
ERGIC3-211ENST00000461043 TNRQ92752 1358 aa18.28■□□□□ 0.52
ERGIC3-211ENST00000461043 NUP155O75694 1391 aa18.27■□□□□ 0.51
ERGIC3-211ENST00000461043 ZNF142P52746 1687 aaPredicted RBP18.26■□□□□ 0.51
ERGIC3-211ENST00000461043 RPRD2Q5VT52 1461 aaKnown RBP18.26■□□□□ 0.51
ERGIC3-211ENST00000461043 CEP170BQ9Y4F5 1589 aaPredicted RBP18.24■□□□□ 0.51
ERGIC3-211ENST00000461043 NOS1P29475 1434 aa18.23■□□□□ 0.51
ERGIC3-211ENST00000461043 NLRP1Q9C000 1473 aa18.23■□□□□ 0.51
ERGIC3-211ENST00000461043 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
ERGIC3-211ENST00000461043 A2ML1A8K2U0 1454 aa18.22■□□□□ 0.51
ERGIC3-211ENST00000461043 E9PCH4 1651 aa18.22■□□□□ 0.51
ERGIC3-211ENST00000461043 SYNMO15061 1565 aa18.21■□□□□ 0.51
ERGIC3-211ENST00000461043 HSPA2P54652 639 aa18.2■□□□□ 0.5
ERGIC3-211ENST00000461043 RAB3GAP2Q9H2M9 1393 aa18.17■□□□□ 0.5
ERGIC3-211ENST00000461043 CFAP65Q6ZU64 1925 aaKnown RBP18.15■□□□□ 0.5
ERGIC3-211ENST00000461043 PTPRTO14522 1441 aa18.15■□□□□ 0.5
ERGIC3-211ENST00000461043 PLA2R1Q13018 1463 aa18.14■□□□□ 0.5
ERGIC3-211ENST00000461043 ACIN1Q9UKV3 1341 aaKnown RBP18.14■□□□□ 0.49
ERGIC3-211ENST00000461043 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
ERGIC3-211ENST00000461043 PIK3C2BO00750 1634 aa18.13■□□□□ 0.49
ERGIC3-211ENST00000461043 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
ERGIC3-211ENST00000461043 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
ERGIC3-211ENST00000461043 STRCQ7RTU9 1775 aa18.12■□□□□ 0.49
ERGIC3-211ENST00000461043 HRCP23327 699 aa18.12■□□□□ 0.49
ERGIC3-211ENST00000461043 KDM5AP29375 1690 aaKnown RBP18.12■□□□□ 0.49
ERGIC3-211ENST00000461043 IDI1Q13907 227 aa18.11■□□□□ 0.49
ERGIC3-211ENST00000461043 SLC52A1Q9NWF4 448 aa18.11■□□□□ 0.49
ERGIC3-211ENST00000461043 SPHKAPQ2M3C7 1700 aa18.09■□□□□ 0.49
ERGIC3-211ENST00000461043 PKD2Q13563 968 aa18.09■□□□□ 0.49
ERGIC3-211ENST00000461043 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
ERGIC3-211ENST00000461043 ADGRB3O60242 1522 aa18.08■□□□□ 0.49
ERGIC3-211ENST00000461043 TRPM2O94759 1503 aa18.08■□□□□ 0.49
ERGIC3-211ENST00000461043 THEMISQ8N1K5 641 aaPredicted RBP18.08■□□□□ 0.48
ERGIC3-211ENST00000461043 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
ERGIC3-211ENST00000461043 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
ERGIC3-211ENST00000461043 SLIT1O75093 1534 aa18.07■□□□□ 0.48
ERGIC3-211ENST00000461043 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
ERGIC3-211ENST00000461043 TMEM131LA2VDJ0 1609 aa18.05■□□□□ 0.48
ERGIC3-211ENST00000461043 NEURL4Q96JN8 1562 aa18.04■□□□□ 0.48
ERGIC3-211ENST00000461043 TMEM2Q9UHN6 1383 aa18.03■□□□□ 0.48
ERGIC3-211ENST00000461043 NCKAP5LQ9HCH0 1330 aa18.02■□□□□ 0.48
ERGIC3-211ENST00000461043 CLTCL1P53675 1640 aa18.02■□□□□ 0.48
ERGIC3-211ENST00000461043 MED14O60244 1454 aa18.01■□□□□ 0.47
ERGIC3-211ENST00000461043 POLR1AO95602 1720 aaPredicted RBP18.01■□□□□ 0.47
ERGIC3-211ENST00000461043 FOXD1Q16676 465 aa18■□□□□ 0.47
ERGIC3-211ENST00000461043 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
ERGIC3-211ENST00000461043 ZFYVE9O95405 1425 aa17.99■□□□□ 0.47
ERGIC3-211ENST00000461043 ANKLE2Q86XL3 938 aa17.99■□□□□ 0.47
ERGIC3-211ENST00000461043 SCAF11Q99590 1463 aaKnown RBP17.98■□□□□ 0.47
ERGIC3-211ENST00000461043 LTKP29376 864 aa17.97■□□□□ 0.47
ERGIC3-211ENST00000461043 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
ERGIC3-211ENST00000461043 MYO5BQ9ULV0 1848 aa17.97■□□□□ 0.47
ERGIC3-211ENST00000461043 NPHP4O75161 1426 aaPredicted RBP17.95■□□□□ 0.46
ERGIC3-211ENST00000461043 RIMS2Q9UQ26 1411 aa17.94■□□□□ 0.46
ERGIC3-211ENST00000461043 ANKRD30BQ9BXX2 1392 aa17.93■□□□□ 0.46
ERGIC3-211ENST00000461043 TXNDC2Q86VQ3 553 aa17.93■□□□□ 0.46
ERGIC3-211ENST00000461043 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
ERGIC3-211ENST00000461043 CCDC144AA2RUR9 1427 aa17.92■□□□□ 0.46
ERGIC3-211ENST00000461043 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms