RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 PTPRKQ15262 1439 aa30.69■■■□□ 2.5
SNAPC3-204ENST00000461041 C3P01024 1663 aa30.67■■■□□ 2.5
SNAPC3-204ENST00000461041 CLTCQ00610 1675 aaKnown RBP30.67■■■□□ 2.5
SNAPC3-204ENST00000461041 MROH2AA6NES4 1674 aa30.66■■■□□ 2.5
SNAPC3-204ENST00000461041 RNF17Q9BXT8 1623 aaKnown RBP30.65■■■□□ 2.5
SNAPC3-204ENST00000461041 ERBINQ96RT1 1412 aa30.65■■■□□ 2.5
SNAPC3-204ENST00000461041 ITGAEP38570 1179 aa30.62■■■□□ 2.49
SNAPC3-204ENST00000461041 ZMYM3Q14202 1370 aa30.61■■■□□ 2.49
SNAPC3-204ENST00000461041 FAM135AQ9P2D6 1515 aa30.61■■■□□ 2.49
SNAPC3-204ENST00000461041 KDM5DQ9BY66 1539 aa30.59■■■□□ 2.49
SNAPC3-204ENST00000461041 MROH1Q8NDA8 1641 aa30.58■■■□□ 2.49
SNAPC3-204ENST00000461041 ROCK1Q13464 1354 aa30.57■■■□□ 2.48
SNAPC3-204ENST00000461041 WASHC2CQ9Y4E1 1318 aa30.56■■■□□ 2.48
SNAPC3-204ENST00000461041 LMTK3Q96Q04 1460 aa30.52■■■□□ 2.48
SNAPC3-204ENST00000461041 DEPDC5O75140 1603 aa30.51■■■□□ 2.48
SNAPC3-204ENST00000461041 ANKRD50Q9ULJ7 1429 aa30.51■■■□□ 2.47
SNAPC3-204ENST00000461041 PRDM15P57071 1507 aaPredicted RBP30.51■■■□□ 2.47
SNAPC3-204ENST00000461041 ZC3H13Q5T200 1668 aaKnown RBP30.5■■■□□ 2.47
SNAPC3-204ENST00000461041 PREX1Q8TCU6 1659 aa30.5■■■□□ 2.47
SNAPC3-204ENST00000461041 ABCC3O15438 1527 aa30.5■■■□□ 2.47
SNAPC3-204ENST00000461041 NPATQ14207 1427 aa30.49■■■□□ 2.47
SNAPC3-204ENST00000461041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.46■■■□□ 2.476e-7■■■■□ 23.2
SNAPC3-204ENST00000461041 SETD1BQ9UPS6 1966 aaKnown RBP30.46■■■□□ 2.47
SNAPC3-204ENST00000461041 CEP152O94986 1710 aa30.45■■■□□ 2.47
SNAPC3-204ENST00000461041 PZPP20742 1482 aa30.44■■■□□ 2.46
SNAPC3-204ENST00000461041 UHRF1BP1Q6BDS2 1440 aa30.43■■■□□ 2.46
SNAPC3-204ENST00000461041 KANK1Q14678 1352 aa30.41■■■□□ 2.46
SNAPC3-204ENST00000461041 CAMSAP1Q5T5Y3 1602 aa30.4■■■□□ 2.46
SNAPC3-204ENST00000461041 VWDEQ8N2E2 1590 aa30.39■■■□□ 2.46
SNAPC3-204ENST00000461041 FBXO31Q5XUX0 539 aaPredicted RBP30.38■■■□□ 2.45
SNAPC3-204ENST00000461041 HSPA2P54652 639 aa30.37■■■□□ 2.45
SNAPC3-204ENST00000461041 UNC13BO14795 1591 aa30.35■■■□□ 2.45
SNAPC3-204ENST00000461041 LMTK2Q8IWU2 1503 aa30.34■■■□□ 2.45
SNAPC3-204ENST00000461041 MYO3AQ8NEV4 1616 aa30.33■■■□□ 2.45
SNAPC3-204ENST00000461041 NAIPQ13075 1403 aa30.31■■■□□ 2.44
SNAPC3-204ENST00000461041 ARHGAP31Q2M1Z3 1444 aa30.31■■■□□ 2.44
SNAPC3-204ENST00000461041 TNRQ92752 1358 aa30.31■■■□□ 2.44
SNAPC3-204ENST00000461041 GCC2Q8IWJ2 1684 aa30.3■■■□□ 2.44
SNAPC3-204ENST00000461041 SPATA31D1Q6ZQQ2 1576 aa30.28■■■□□ 2.44
SNAPC3-204ENST00000461041 ERVK-7P63135 1459 aa30.28■■■□□ 2.44
SNAPC3-204ENST00000461041 ZNF142P52746 1687 aaPredicted RBP30.27■■■□□ 2.44
SNAPC3-204ENST00000461041 HFM1A2PYH4 1435 aa30.27■■■□□ 2.44
SNAPC3-204ENST00000461041 CEP170BQ9Y4F5 1589 aaPredicted RBP30.26■■■□□ 2.43
SNAPC3-204ENST00000461041 EFCAB6Q5THR3 1501 aa30.25■■■□□ 2.43
SNAPC3-204ENST00000461041 A2ML1A8K2U0 1454 aa30.23■■■□□ 2.43
SNAPC3-204ENST00000461041 IQGAP3Q86VI3 1631 aa30.22■■■□□ 2.43
SNAPC3-204ENST00000461041 CFAP65Q6ZU64 1925 aaKnown RBP30.22■■■□□ 2.43
SNAPC3-204ENST00000461041 TET3O43151 1660 aa30.22■■■□□ 2.43
SNAPC3-204ENST00000461041 NUP155O75694 1391 aa30.21■■■□□ 2.43
SNAPC3-204ENST00000461041 NLRP1Q9C000 1473 aa30.2■■■□□ 2.43
SNAPC3-204ENST00000461041 RPRD2Q5VT52 1461 aaKnown RBP30.15■■■□□ 2.42
SNAPC3-204ENST00000461041 STRCQ7RTU9 1775 aa30.13■■■□□ 2.41
SNAPC3-204ENST00000461041 NOS1P29475 1434 aa30.12■■■□□ 2.41
SNAPC3-204ENST00000461041 E9PCH4 1651 aa30.11■■■□□ 2.41
SNAPC3-204ENST00000461041 UGGT1Q9NYU2 1555 aa30.1■■■□□ 2.41
SNAPC3-204ENST00000461041 SYNMO15061 1565 aa30.09■■■□□ 2.41
SNAPC3-204ENST00000461041 PLA2R1Q13018 1463 aa30.09■■■□□ 2.41
SNAPC3-204ENST00000461041 THEMISQ8N1K5 641 aaPredicted RBP30.05■■■□□ 2.4
SNAPC3-204ENST00000461041 TRIM52Q96A61 297 aa30.05■■■□□ 2.4
SNAPC3-204ENST00000461041 PIK3C2BO00750 1634 aa30.03■■■□□ 2.4
SNAPC3-204ENST00000461041 UBR1Q8IWV7 1749 aa30.02■■■□□ 2.4
SNAPC3-204ENST00000461041 SETD5Q9C0A6 1442 aa30.02■■■□□ 2.4
SNAPC3-204ENST00000461041 NCKAP5LQ9HCH0 1330 aa30.01■■■□□ 2.4
SNAPC3-204ENST00000461041 IDI1Q13907 227 aa30.01■■■□□ 2.39
SNAPC3-204ENST00000461041 DMRT2Q9Y5R5 561 aa30.01■■■□□ 2.39
SNAPC3-204ENST00000461041 PKD2Q13563 968 aa29.99■■■□□ 2.39
SNAPC3-204ENST00000461041 SLC52A1Q9NWF4 448 aa29.99■■■□□ 2.39
SNAPC3-204ENST00000461041 PTPRTO14522 1441 aa29.97■■■□□ 2.39
SNAPC3-204ENST00000461041 KDM5AP29375 1690 aaKnown RBP29.95■■■□□ 2.38
SNAPC3-204ENST00000461041 POLR1AO95602 1720 aaPredicted RBP29.94■■■□□ 2.38
SNAPC3-204ENST00000461041 STAG3Q9UJ98 1225 aa29.94■■■□□ 2.38
SNAPC3-204ENST00000461041 ANKLE2Q86XL3 938 aa29.93■■■□□ 2.38
SNAPC3-204ENST00000461041 SLC4A1APQ9BWU0 796 aaKnown RBP29.93■■■□□ 2.38
SNAPC3-204ENST00000461041 ADGRB3O60242 1522 aa29.91■■■□□ 2.38
SNAPC3-204ENST00000461041 RAB3GAP2Q9H2M9 1393 aa29.91■■■□□ 2.38
SNAPC3-204ENST00000461041 SPHKAPQ2M3C7 1700 aa29.91■■■□□ 2.38
SNAPC3-204ENST00000461041 NEURL4Q96JN8 1562 aa29.9■■■□□ 2.38
SNAPC3-204ENST00000461041 ARHGAP23Q9P227 1491 aa29.89■■■□□ 2.38
SNAPC3-204ENST00000461041 SLIT1O75093 1534 aa29.89■■■□□ 2.38
SNAPC3-204ENST00000461041 ACIN1Q9UKV3 1341 aaKnown RBP29.89■■■□□ 2.38
SNAPC3-204ENST00000461041 TMEM2Q9UHN6 1383 aa29.85■■■□□ 2.37
SNAPC3-204ENST00000461041 TMEM131LA2VDJ0 1609 aa29.84■■■□□ 2.37
SNAPC3-204ENST00000461041 MED14O60244 1454 aa29.83■■■□□ 2.37
SNAPC3-204ENST00000461041 TRPM2O94759 1503 aa29.82■■■□□ 2.36
SNAPC3-204ENST00000461041 SCAF11Q99590 1463 aaKnown RBP29.82■■■□□ 2.36
SNAPC3-204ENST00000461041 MPHOSPH9Q99550 1183 aa29.82■■■□□ 2.36
SNAPC3-204ENST00000461041 NPHP4O75161 1426 aaPredicted RBP29.81■■■□□ 2.36
SNAPC3-204ENST00000461041 MYO5BQ9ULV0 1848 aa29.81■■■□□ 2.36
SNAPC3-204ENST00000461041 LTKP29376 864 aa29.81■■■□□ 2.36
SNAPC3-204ENST00000461041 TXNDC2Q86VQ3 553 aa29.81■■■□□ 2.36
SNAPC3-204ENST00000461041 CHGAP10645 457 aaKnown RBP29.8■■■□□ 2.36
SNAPC3-204ENST00000461041 EID1Q9Y6B2 187 aa29.79■■■□□ 2.36
SNAPC3-204ENST00000461041 IQGAP1P46940 1657 aa29.78■■■□□ 2.36
SNAPC3-204ENST00000461041 CLTCL1P53675 1640 aa29.78■■■□□ 2.36
SNAPC3-204ENST00000461041 FOXD1Q16676 465 aa29.77■■■□□ 2.36
SNAPC3-204ENST00000461041 HRCP23327 699 aa29.76■■■□□ 2.35
SNAPC3-204ENST00000461041 ZFYVE9O95405 1425 aa29.72■■■□□ 2.35
SNAPC3-204ENST00000461041 RIMS2Q9UQ26 1411 aa29.71■■■□□ 2.35
SNAPC3-204ENST00000461041 ZNF335Q9H4Z2 1342 aaPredicted RBP29.7■■■□□ 2.34
SNAPC3-204ENST00000461041 LTBP4Q8N2S1 1624 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms