RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 POLR1AO95602 1720 aaPredicted RBP19.07■□□□□ 0.64
PCYT1A-213ENST00000460827 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
PCYT1A-213ENST00000460827 CPS1P31327 1500 aa19.05■□□□□ 0.64
PCYT1A-213ENST00000460827 PIP4K2BP78356 416 aa19.04■□□□□ 0.64
PCYT1A-213ENST00000460827 SHANK2Q9UPX8 1470 aa19.03■□□□□ 0.64
PCYT1A-213ENST00000460827 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
PCYT1A-213ENST00000460827 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
PCYT1A-213ENST00000460827 ZNF644Q9H582 1327 aaPredicted RBP19.02■□□□□ 0.64
PCYT1A-213ENST00000460827 TOM1O60784 492 aa19.02■□□□□ 0.64
PCYT1A-213ENST00000460827 FBXO31Q5XUX0 539 aaPredicted RBP19.01■□□□□ 0.63
PCYT1A-213ENST00000460827 ALKQ9UM73 1620 aa19■□□□□ 0.63
PCYT1A-213ENST00000460827 TNRQ92752 1358 aa19■□□□□ 0.63
PCYT1A-213ENST00000460827 VWDEQ8N2E2 1590 aa19■□□□□ 0.63
PCYT1A-213ENST00000460827 TIAM1Q13009 1591 aa18.99■□□□□ 0.63
PCYT1A-213ENST00000460827 DHX29Q7Z478 1369 aaKnown RBP18.99■□□□□ 0.63
PCYT1A-213ENST00000460827 RTEL1-TNFRSF6BF6WH68 1400 aa18.99■□□□□ 0.63
PCYT1A-213ENST00000460827 PZPP20742 1482 aa18.98■□□□□ 0.63
PCYT1A-213ENST00000460827 MTUS2Q5JR59 1369 aa18.97■□□□□ 0.63
PCYT1A-213ENST00000460827 KDM5DQ9BY66 1539 aa18.95■□□□□ 0.62
PCYT1A-213ENST00000460827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.95■□□□□ 0.62
PCYT1A-213ENST00000460827 FAM135AQ9P2D6 1515 aa18.95■□□□□ 0.62
PCYT1A-213ENST00000460827 DEPDC5O75140 1603 aa18.94■□□□□ 0.62
PCYT1A-213ENST00000460827 KIF3BO15066 747 aa18.94■□□□□ 0.62
PCYT1A-213ENST00000460827 ANKLE2Q86XL3 938 aa18.94■□□□□ 0.62
PCYT1A-213ENST00000460827 MED14O60244 1454 aa18.94■□□□□ 0.62
PCYT1A-213ENST00000460827 NPHP4O75161 1426 aaPredicted RBP18.91■□□□□ 0.62
PCYT1A-213ENST00000460827 MIA2Q96PC5 1412 aa18.91■□□□□ 0.62
PCYT1A-213ENST00000460827 STRCP1A6NGW2 1772 aa18.91■□□□□ 0.62
PCYT1A-213ENST00000460827 THEMISQ8N1K5 641 aaPredicted RBP18.91■□□□□ 0.62
PCYT1A-213ENST00000460827 NLRP1Q9C000 1473 aa18.9■□□□□ 0.62
PCYT1A-213ENST00000460827 UGGT1Q9NYU2 1555 aa18.9■□□□□ 0.62
PCYT1A-213ENST00000460827 EHBP1L1Q8N3D4 1523 aa18.9■□□□□ 0.62
PCYT1A-213ENST00000460827 WASHC2CQ9Y4E1 1318 aa18.89■□□□□ 0.61
PCYT1A-213ENST00000460827 IQGAP1P46940 1657 aa18.89■□□□□ 0.61
PCYT1A-213ENST00000460827 CEP162Q5TB80 1403 aa18.88■□□□□ 0.61
PCYT1A-213ENST00000460827 CCDC141Q6ZP82 1450 aa18.88■□□□□ 0.61
PCYT1A-213ENST00000460827 LRRC7Q96NW7 1537 aa18.86■□□□□ 0.61
PCYT1A-213ENST00000460827 CAMSAP2Q08AD1 1489 aa18.84■□□□□ 0.61
PCYT1A-213ENST00000460827 RNF17Q9BXT8 1623 aaKnown RBP18.83■□□□□ 0.61
PCYT1A-213ENST00000460827 SYNMO15061 1565 aa18.82■□□□□ 0.6
PCYT1A-213ENST00000460827 ZC3H13Q5T200 1668 aaKnown RBP18.81■□□□□ 0.6
PCYT1A-213ENST00000460827 RSPH4AQ5TD94 716 aa18.8■□□□□ 0.6
PCYT1A-213ENST00000460827 ABCC3O15438 1527 aa18.79■□□□□ 0.6
PCYT1A-213ENST00000460827 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
PCYT1A-213ENST00000460827 RGS17Q9UGC6 210 aaPredicted RBP18.79■□□□□ 0.6
PCYT1A-213ENST00000460827 ARHGEF5Q12774 1597 aa18.79■□□□□ 0.6
PCYT1A-213ENST00000460827 CFAP65Q6ZU64 1925 aaKnown RBP18.78■□□□□ 0.6
PCYT1A-213ENST00000460827 ERVK-7P63135 1459 aa18.77■□□□□ 0.59
PCYT1A-213ENST00000460827 XIRP1Q702N8 1843 aaKnown RBP18.77■□□□□ 0.59
PCYT1A-213ENST00000460827 UBR1Q8IWV7 1749 aa18.76■□□□□ 0.59
PCYT1A-213ENST00000460827 MROH1Q8NDA8 1641 aa18.74■□□□□ 0.59
PCYT1A-213ENST00000460827 TSPY4P0CV99 314 aa18.73■□□□□ 0.59
PCYT1A-213ENST00000460827 TSPY10P0CW01 314 aa18.73■□□□□ 0.59
PCYT1A-213ENST00000460827 SCAF11Q99590 1463 aaKnown RBP18.72■□□□□ 0.59
PCYT1A-213ENST00000460827 EIF2AK4Q9P2K8 1649 aaKnown RBP18.71■□□□□ 0.59
PCYT1A-213ENST00000460827 MAST1Q9Y2H9 1570 aa18.71■□□□□ 0.59
PCYT1A-213ENST00000460827 CEP152O94986 1710 aa18.71■□□□□ 0.59
PCYT1A-213ENST00000460827 ARHGAP23Q9P227 1491 aa18.71■□□□□ 0.59
PCYT1A-213ENST00000460827 LTKP29376 864 aa18.7■□□□□ 0.58
PCYT1A-213ENST00000460827 SLIT1O75093 1534 aa18.69■□□□□ 0.58
PCYT1A-213ENST00000460827 FAM135BQ49AJ0 1406 aa18.66■□□□□ 0.58
PCYT1A-213ENST00000460827 TXNDC2Q86VQ3 553 aa18.65■□□□□ 0.58
PCYT1A-213ENST00000460827 POTEAQ6S8J7 498 aa18.64■□□□□ 0.57
PCYT1A-213ENST00000460827 ARHGAP31Q2M1Z3 1444 aa18.62■□□□□ 0.57
PCYT1A-213ENST00000460827 PIK3C2BO00750 1634 aa18.6■□□□□ 0.57
PCYT1A-213ENST00000460827 PRDM15P57071 1507 aaPredicted RBP18.59■□□□□ 0.57
PCYT1A-213ENST00000460827 DUOX2Q9NRD8 1548 aa18.59■□□□□ 0.57
PCYT1A-213ENST00000460827 LRRC9Q6ZRR7 1453 aa18.59■□□□□ 0.57
PCYT1A-213ENST00000460827 TMEM94Q12767 1356 aa18.59■□□□□ 0.57
PCYT1A-213ENST00000460827 EID1Q9Y6B2 187 aa18.59■□□□□ 0.57
PCYT1A-213ENST00000460827 ROBO1Q9Y6N7 1651 aa18.59■□□□□ 0.57
PCYT1A-213ENST00000460827 TMEM2Q9UHN6 1383 aa18.58■□□□□ 0.57
PCYT1A-213ENST00000460827 MAP3K1Q13233 1512 aa18.58■□□□□ 0.56
PCYT1A-213ENST00000460827 SRCAPQ6ZRS2 3230 aa18.57■□□□□ 0.56
PCYT1A-213ENST00000460827 TET3O43151 1660 aa18.55■□□□□ 0.56
PCYT1A-213ENST00000460827 KDM5AP29375 1690 aaKnown RBP18.55■□□□□ 0.56
PCYT1A-213ENST00000460827 KCNA6P17658 529 aa18.54■□□□□ 0.56
PCYT1A-213ENST00000460827 MYOM3Q5VTT5 1437 aa18.54■□□□□ 0.56
PCYT1A-213ENST00000460827 SETD1AO15047 1707 aaKnown RBP18.53■□□□□ 0.56
PCYT1A-213ENST00000460827 EFCAB6Q5THR3 1501 aa18.53■□□□□ 0.56
PCYT1A-213ENST00000460827 KIF15Q9NS87 1388 aa18.53■□□□□ 0.56
PCYT1A-213ENST00000460827 RBM33Q96EV2 1170 aaKnown RBP18.52■□□□□ 0.56
PCYT1A-213ENST00000460827 ERBINQ96RT1 1412 aa18.51■□□□□ 0.55
PCYT1A-213ENST00000460827 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
PCYT1A-213ENST00000460827 KANK4Q5T7N3 995 aaPredicted RBP18.51■□□□□ 0.55
PCYT1A-213ENST00000460827 IDI1Q13907 227 aa18.5■□□□□ 0.55
PCYT1A-213ENST00000460827 PROSER2Q86WR7 435 aaPredicted RBP18.5■□□□□ 0.55
PCYT1A-213ENST00000460827 SLC26A8Q96RN1 970 aa18.5■□□□□ 0.55
PCYT1A-213ENST00000460827 NWD1Q149M9 1564 aa18.5■□□□□ 0.55
PCYT1A-213ENST00000460827 CROCC2H7BZ55 1655 aa18.5■□□□□ 0.55
PCYT1A-213ENST00000460827 VPS8Q8N3P4 1428 aa18.49■□□□□ 0.55
PCYT1A-213ENST00000460827 NKTRP30414 1462 aaKnown RBP18.48■□□□□ 0.55
PCYT1A-213ENST00000460827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.55
PCYT1A-213ENST00000460827 RRP7BPQ9NSQ0 103 aa18.48■□□□□ 0.55
PCYT1A-213ENST00000460827 STAG3Q9UJ98 1225 aa18.48■□□□□ 0.55
PCYT1A-213ENST00000460827 PHLPP1O60346 1717 aa18.48■□□□□ 0.55
PCYT1A-213ENST00000460827 ABCC5O15440 1437 aa18.48■□□□□ 0.55
PCYT1A-213ENST00000460827 LMTK2Q8IWU2 1503 aa18.46■□□□□ 0.55
PCYT1A-213ENST00000460827 KANK1Q14678 1352 aa18.44■□□□□ 0.54
PCYT1A-213ENST00000460827 JCADQ9P266 1359 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms