RNA–Protein interactions for RNA: ENST00000460808.5

TGFA-208, Transcript of transforming growth factor alpha, humanhuman

TSL 4

Gene TGFA, Length 470 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-208ENST00000460808 KIF3BO15066 747 aa18.59■□□□□ 0.57
TGFA-208ENST00000460808 HSPA2P54652 639 aa18.59■□□□□ 0.57
TGFA-208ENST00000460808 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
TGFA-208ENST00000460808 STRCQ7RTU9 1775 aa18.59■□□□□ 0.57
TGFA-208ENST00000460808 UHRF1BP1Q6BDS2 1440 aa18.58■□□□□ 0.57
TGFA-208ENST00000460808 ADGRL2O95490 1459 aa18.58■□□□□ 0.56
TGFA-208ENST00000460808 ZNF142P52746 1687 aaPredicted RBP18.57■□□□□ 0.56
TGFA-208ENST00000460808 DEPDC5O75140 1603 aa18.57■□□□□ 0.56
TGFA-208ENST00000460808 ESF1Q9H501 851 aaKnown RBP18.56■□□□□ 0.56
TGFA-208ENST00000460808 ZC3H13Q5T200 1668 aaKnown RBP18.56■□□□□ 0.56
TGFA-208ENST00000460808 MYO3AQ8NEV4 1616 aa18.56■□□□□ 0.56
TGFA-208ENST00000460808 KIF15Q9NS87 1388 aa18.55■□□□□ 0.56
TGFA-208ENST00000460808 PZPP20742 1482 aa18.55■□□□□ 0.56
TGFA-208ENST00000460808 NCOA1Q15788 1441 aa18.55■□□□□ 0.56
TGFA-208ENST00000460808 ERBINQ96RT1 1412 aa18.55■□□□□ 0.56
TGFA-208ENST00000460808 ABCC3O15438 1527 aa18.54■□□□□ 0.56
TGFA-208ENST00000460808 PRDM15P57071 1507 aaPredicted RBP18.54■□□□□ 0.56
TGFA-208ENST00000460808 VWDEQ8N2E2 1590 aa18.51■□□□□ 0.55
TGFA-208ENST00000460808 CEP152O94986 1710 aa18.5■□□□□ 0.55
TGFA-208ENST00000460808 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.5■□□□□ 0.55
TGFA-208ENST00000460808 CEP170BQ9Y4F5 1589 aaPredicted RBP18.5■□□□□ 0.55
TGFA-208ENST00000460808 ANKRD30AQ9BXX3 1397 aa18.49■□□□□ 0.55
TGFA-208ENST00000460808 CAMSAP1Q5T5Y3 1602 aa18.49■□□□□ 0.55
TGFA-208ENST00000460808 RRP7BPQ9NSQ0 103 aa18.48■□□□□ 0.55
TGFA-208ENST00000460808 WASHC2CQ9Y4E1 1318 aa18.48■□□□□ 0.55
TGFA-208ENST00000460808 SPATA31D1Q6ZQQ2 1576 aa18.47■□□□□ 0.55
TGFA-208ENST00000460808 FBXO31Q5XUX0 539 aaPredicted RBP18.45■□□□□ 0.54
TGFA-208ENST00000460808 A2ML1A8K2U0 1454 aa18.45■□□□□ 0.54
TGFA-208ENST00000460808 LMTK2Q8IWU2 1503 aa18.44■□□□□ 0.54
TGFA-208ENST00000460808 ARHGAP31Q2M1Z3 1444 aa18.44■□□□□ 0.54
TGFA-208ENST00000460808 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
TGFA-208ENST00000460808 CHIC2Q9UKJ5 165 aa18.44■□□□□ 0.54
TGFA-208ENST00000460808 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
TGFA-208ENST00000460808 FAM50AQ14320 339 aaKnown RBP18.43■□□□□ 0.54
TGFA-208ENST00000460808 ROCK1Q13464 1354 aa18.42■□□□□ 0.54
TGFA-208ENST00000460808 TNRQ92752 1358 aa18.42■□□□□ 0.54
TGFA-208ENST00000460808 ERVK-7P63135 1459 aa18.42■□□□□ 0.54
TGFA-208ENST00000460808 PTPRTO14522 1441 aa18.41■□□□□ 0.54
TGFA-208ENST00000460808 PPARGC1BQ86YN6 1023 aaKnown RBP18.41■□□□□ 0.54
TGFA-208ENST00000460808 ANKRD50Q9ULJ7 1429 aa18.4■□□□□ 0.54
TGFA-208ENST00000460808 NLRP1Q9C000 1473 aa18.4■□□□□ 0.54
TGFA-208ENST00000460808 UNC13BO14795 1591 aa18.38■□□□□ 0.53
TGFA-208ENST00000460808 CFAP65Q6ZU64 1925 aaKnown RBP18.37■□□□□ 0.53
TGFA-208ENST00000460808 EFCAB6Q5THR3 1501 aa18.36■□□□□ 0.53
TGFA-208ENST00000460808 NEURL4Q96JN8 1562 aa18.35■□□□□ 0.53
TGFA-208ENST00000460808 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
TGFA-208ENST00000460808 POLR1AO95602 1720 aaPredicted RBP18.34■□□□□ 0.53
TGFA-208ENST00000460808 UBR1Q8IWV7 1749 aa18.33■□□□□ 0.52
TGFA-208ENST00000460808 UGGT1Q9NYU2 1555 aa18.33■□□□□ 0.52
TGFA-208ENST00000460808 LTBP4Q8N2S1 1624 aa18.32■□□□□ 0.52
TGFA-208ENST00000460808 NOS1P29475 1434 aa18.32■□□□□ 0.52
TGFA-208ENST00000460808 TET3O43151 1660 aa18.31■□□□□ 0.52
TGFA-208ENST00000460808 SYNMO15061 1565 aa18.31■□□□□ 0.52
TGFA-208ENST00000460808 KANK1Q14678 1352 aa18.3■□□□□ 0.52
TGFA-208ENST00000460808 PKD2Q13563 968 aa18.3■□□□□ 0.52
TGFA-208ENST00000460808 ILDR1Q86SU0 546 aaPredicted RBP18.3■□□□□ 0.52
TGFA-208ENST00000460808 KDM5AP29375 1690 aaKnown RBP18.3■□□□□ 0.52
TGFA-208ENST00000460808 GCC2Q8IWJ2 1684 aa18.3■□□□□ 0.52
TGFA-208ENST00000460808 IQGAP3Q86VI3 1631 aa18.3■□□□□ 0.52
TGFA-208ENST00000460808 NCKAP5LQ9HCH0 1330 aa18.29■□□□□ 0.52
TGFA-208ENST00000460808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.29■□□□□ 0.52
TGFA-208ENST00000460808 MED14O60244 1454 aa18.28■□□□□ 0.52
TGFA-208ENST00000460808 RPRD2Q5VT52 1461 aaKnown RBP18.28■□□□□ 0.52
TGFA-208ENST00000460808 PIK3C2BO00750 1634 aa18.27■□□□□ 0.52
TGFA-208ENST00000460808 ARHGAP23Q9P227 1491 aa18.26■□□□□ 0.51
TGFA-208ENST00000460808 E9PCH4 1651 aa18.26■□□□□ 0.51
TGFA-208ENST00000460808 SLIT1O75093 1534 aa18.25■□□□□ 0.51
TGFA-208ENST00000460808 NAIPQ13075 1403 aa18.24■□□□□ 0.51
TGFA-208ENST00000460808 THEMISQ8N1K5 641 aaPredicted RBP18.24■□□□□ 0.51
TGFA-208ENST00000460808 CERKQ8TCT0 537 aa18.23■□□□□ 0.51
TGFA-208ENST00000460808 FBXO41Q8TF61 875 aa18.22■□□□□ 0.51
TGFA-208ENST00000460808 ITGAEP38570 1179 aa18.21■□□□□ 0.51
TGFA-208ENST00000460808 IQGAP1P46940 1657 aa18.2■□□□□ 0.5
TGFA-208ENST00000460808 HFM1A2PYH4 1435 aa18.19■□□□□ 0.5
TGFA-208ENST00000460808 IDI1Q13907 227 aa18.19■□□□□ 0.5
TGFA-208ENST00000460808 ANKLE2Q86XL3 938 aa18.18■□□□□ 0.5
TGFA-208ENST00000460808 IQSEC2Q5JU85 1478 aa18.18■□□□□ 0.5
TGFA-208ENST00000460808 ADGRB3O60242 1522 aa18.18■□□□□ 0.5
TGFA-208ENST00000460808 NPHP4O75161 1426 aaPredicted RBP18.17■□□□□ 0.5
TGFA-208ENST00000460808 ZNF335Q9H4Z2 1342 aaPredicted RBP18.17■□□□□ 0.5
TGFA-208ENST00000460808 MYO5BQ9ULV0 1848 aa18.16■□□□□ 0.5
TGFA-208ENST00000460808 TMEM131LA2VDJ0 1609 aa18.16■□□□□ 0.5
TGFA-208ENST00000460808 NUP155O75694 1391 aa18.16■□□□□ 0.5
TGFA-208ENST00000460808 TMEM2Q9UHN6 1383 aa18.16■□□□□ 0.5
TGFA-208ENST00000460808 SCAF11Q99590 1463 aaKnown RBP18.15■□□□□ 0.5
TGFA-208ENST00000460808 LTKP29376 864 aa18.15■□□□□ 0.5
TGFA-208ENST00000460808 SLC52A1Q9NWF4 448 aa18.15■□□□□ 0.5
TGFA-208ENST00000460808 STRCP1A6NGW2 1772 aa18.14■□□□□ 0.5
TGFA-208ENST00000460808 SPHKAPQ2M3C7 1700 aa18.12■□□□□ 0.49
TGFA-208ENST00000460808 ZFYVE9O95405 1425 aa18.11■□□□□ 0.49
TGFA-208ENST00000460808 CPS1P31327 1500 aa18.09■□□□□ 0.49
TGFA-208ENST00000460808 TXNDC2Q86VQ3 553 aa18.07■□□□□ 0.48
TGFA-208ENST00000460808 TRPM2O94759 1503 aa18.04■□□□□ 0.48
TGFA-208ENST00000460808 CLTCL1P53675 1640 aa18.02■□□□□ 0.48
TGFA-208ENST00000460808 ALKQ9UM73 1620 aa18.02■□□□□ 0.48
TGFA-208ENST00000460808 XIRP1Q702N8 1843 aaKnown RBP18.02■□□□□ 0.47
TGFA-208ENST00000460808 EID1Q9Y6B2 187 aa18.01■□□□□ 0.47
TGFA-208ENST00000460808 LRRC7Q96NW7 1537 aa18.01■□□□□ 0.47
TGFA-208ENST00000460808 RIMS2Q9UQ26 1411 aa18■□□□□ 0.47
TGFA-208ENST00000460808 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms