RNA–Protein interactions for RNA: ENST00000460475.1

PLOD3-209, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-209ENST00000460475 CLTCQ00610 1675 aaKnown RBP27.27■■□□□ 1.96
PLOD3-209ENST00000460475 RNF17Q9BXT8 1623 aaKnown RBP27.27■■□□□ 1.96
PLOD3-209ENST00000460475 RRP7BPQ9NSQ0 103 aa27.27■■□□□ 1.96
PLOD3-209ENST00000460475 CHIC2Q9UKJ5 165 aa27.27■■□□□ 1.96
PLOD3-209ENST00000460475 ZMYM3Q14202 1370 aa27.26■■□□□ 1.95
PLOD3-209ENST00000460475 ERBINQ96RT1 1412 aa27.25■■□□□ 1.95
PLOD3-209ENST00000460475 RRBP1Q9P2E9 1410 aaKnown RBP27.25■■□□□ 1.95
PLOD3-209ENST00000460475 PLPPR3Q6T4P5 718 aa27.25■■□□□ 1.95
PLOD3-209ENST00000460475 PTPRKQ15262 1439 aa27.24■■□□□ 1.95
PLOD3-209ENST00000460475 LMTK3Q96Q04 1460 aa27.22■■□□□ 1.95
PLOD3-209ENST00000460475 KDM5DQ9BY66 1539 aa27.21■■□□□ 1.95
PLOD3-209ENST00000460475 MROH1Q8NDA8 1641 aa27.19■■□□□ 1.94
PLOD3-209ENST00000460475 NPATQ14207 1427 aa27.19■■□□□ 1.94
PLOD3-209ENST00000460475 PREX1Q8TCU6 1659 aa27.18■■□□□ 1.94
PLOD3-209ENST00000460475 ROCK1Q13464 1354 aa27.18■■□□□ 1.94
PLOD3-209ENST00000460475 WASHC2CQ9Y4E1 1318 aa27.17■■□□□ 1.94
PLOD3-209ENST00000460475 DEPDC5O75140 1603 aa27.14■■□□□ 1.94
PLOD3-209ENST00000460475 ZC3H13Q5T200 1668 aaKnown RBP27.14■■□□□ 1.93
PLOD3-209ENST00000460475 PRDM15P57071 1507 aaPredicted RBP27.13■■□□□ 1.93
PLOD3-209ENST00000460475 ABCC3O15438 1527 aa27.12■■□□□ 1.93
PLOD3-209ENST00000460475 ANKRD50Q9ULJ7 1429 aa27.11■■□□□ 1.93
PLOD3-209ENST00000460475 PZPP20742 1482 aa27.1■■□□□ 1.93
PLOD3-209ENST00000460475 UHRF1BP1Q6BDS2 1440 aa27.09■■□□□ 1.93
PLOD3-209ENST00000460475 ITGAEP38570 1179 aa27.07■■□□□ 1.92
PLOD3-209ENST00000460475 VWDEQ8N2E2 1590 aa27.05■■□□□ 1.92
PLOD3-209ENST00000460475 CEP152O94986 1710 aa27.05■■□□□ 1.92
PLOD3-209ENST00000460475 HSPA2P54652 639 aa27.04■■□□□ 1.92
PLOD3-209ENST00000460475 CAMSAP1Q5T5Y3 1602 aa27.02■■□□□ 1.92
PLOD3-209ENST00000460475 KANK1Q14678 1352 aa27.02■■□□□ 1.92
PLOD3-209ENST00000460475 FBXO31Q5XUX0 539 aaPredicted RBP27.02■■□□□ 1.92
PLOD3-209ENST00000460475 LMTK2Q8IWU2 1503 aa27.01■■□□□ 1.91
PLOD3-209ENST00000460475 ARHGAP31Q2M1Z3 1444 aa27.01■■□□□ 1.91
PLOD3-209ENST00000460475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.01■■□□□ 1.91
PLOD3-209ENST00000460475 MYO3AQ8NEV4 1616 aa26.99■■□□□ 1.91
PLOD3-209ENST00000460475 TNRQ92752 1358 aa26.97■■□□□ 1.91
PLOD3-209ENST00000460475 ZNF142P52746 1687 aaPredicted RBP26.97■■□□□ 1.91
PLOD3-209ENST00000460475 UNC13BO14795 1591 aa26.96■■□□□ 1.91
PLOD3-209ENST00000460475 SPATA31D1Q6ZQQ2 1576 aa26.96■■□□□ 1.91
PLOD3-209ENST00000460475 CFAP65Q6ZU64 1925 aaKnown RBP26.94■■□□□ 1.9
PLOD3-209ENST00000460475 CEP170BQ9Y4F5 1589 aaPredicted RBP26.93■■□□□ 1.9
PLOD3-209ENST00000460475 ERVK-7P63135 1459 aa26.93■■□□□ 1.9
PLOD3-209ENST00000460475 A2ML1A8K2U0 1454 aa26.92■■□□□ 1.9
PLOD3-209ENST00000460475 NAIPQ13075 1403 aa26.91■■□□□ 1.9
PLOD3-209ENST00000460475 NLRP1Q9C000 1473 aa26.9■■□□□ 1.9
PLOD3-209ENST00000460475 STRCQ7RTU9 1775 aa26.89■■□□□ 1.9
PLOD3-209ENST00000460475 EFCAB6Q5THR3 1501 aa26.89■■□□□ 1.89
PLOD3-209ENST00000460475 HFM1A2PYH4 1435 aa26.88■■□□□ 1.89
PLOD3-209ENST00000460475 GCC2Q8IWJ2 1684 aa26.88■■□□□ 1.89
PLOD3-209ENST00000460475 TET3O43151 1660 aa26.85■■□□□ 1.89
PLOD3-209ENST00000460475 IQGAP3Q86VI3 1631 aa26.85■■□□□ 1.89
PLOD3-209ENST00000460475 PLA2R1Q13018 1463 aa26.83■■□□□ 1.89
PLOD3-209ENST00000460475 RPRD2Q5VT52 1461 aaKnown RBP26.83■■□□□ 1.89
PLOD3-209ENST00000460475 NUP155O75694 1391 aa26.82■■□□□ 1.88
PLOD3-209ENST00000460475 NOS1P29475 1434 aa26.81■■□□□ 1.88
PLOD3-209ENST00000460475 DMRT2Q9Y5R5 561 aa26.8■■□□□ 1.88
PLOD3-209ENST00000460475 UGGT1Q9NYU2 1555 aa26.79■■□□□ 1.88
PLOD3-209ENST00000460475 THEMISQ8N1K5 641 aaPredicted RBP26.77■■□□□ 1.88
PLOD3-209ENST00000460475 SYNMO15061 1565 aa26.75■■□□□ 1.87
PLOD3-209ENST00000460475 PTPRTO14522 1441 aa26.75■■□□□ 1.87
PLOD3-209ENST00000460475 PKD2Q13563 968 aa26.75■■□□□ 1.87
PLOD3-209ENST00000460475 E9PCH4 1651 aa26.75■■□□□ 1.87
PLOD3-209ENST00000460475 UBR1Q8IWV7 1749 aa26.72■■□□□ 1.87
PLOD3-209ENST00000460475 NCKAP5LQ9HCH0 1330 aa26.7■■□□□ 1.87
PLOD3-209ENST00000460475 IDI1Q13907 227 aa26.7■■□□□ 1.86
PLOD3-209ENST00000460475 SLC52A1Q9NWF4 448 aa26.7■■□□□ 1.86
PLOD3-209ENST00000460475 KDM5AP29375 1690 aaKnown RBP26.7■■□□□ 1.86
PLOD3-209ENST00000460475 PIK3C2BO00750 1634 aa26.68■■□□□ 1.86
PLOD3-209ENST00000460475 POLR1AO95602 1720 aaPredicted RBP26.66■■□□□ 1.86
PLOD3-209ENST00000460475 ANKLE2Q86XL3 938 aa26.65■■□□□ 1.86
PLOD3-209ENST00000460475 ARHGAP23Q9P227 1491 aa26.63■■□□□ 1.85
PLOD3-209ENST00000460475 NEURL4Q96JN8 1562 aa26.63■■□□□ 1.85
PLOD3-209ENST00000460475 SLIT1O75093 1534 aa26.62■■□□□ 1.85
PLOD3-209ENST00000460475 MED14O60244 1454 aa26.62■■□□□ 1.85
PLOD3-209ENST00000460475 TRIM52Q96A61 297 aa26.61■■□□□ 1.85
PLOD3-209ENST00000460475 SETD5Q9C0A6 1442 aa26.61■■□□□ 1.85
PLOD3-209ENST00000460475 ACIN1Q9UKV3 1341 aaKnown RBP26.61■■□□□ 1.85
PLOD3-209ENST00000460475 ADGRB3O60242 1522 aa26.6■■□□□ 1.85
PLOD3-209ENST00000460475 STAG3Q9UJ98 1225 aa26.58■■□□□ 1.85
PLOD3-209ENST00000460475 TMEM2Q9UHN6 1383 aa26.58■■□□□ 1.84
PLOD3-209ENST00000460475 SPHKAPQ2M3C7 1700 aa26.57■■□□□ 1.84
PLOD3-209ENST00000460475 TMEM131LA2VDJ0 1609 aa26.54■■□□□ 1.84
PLOD3-209ENST00000460475 SLC4A1APQ9BWU0 796 aaKnown RBP26.54■■□□□ 1.84
PLOD3-209ENST00000460475 NPHP4O75161 1426 aaPredicted RBP26.54■■□□□ 1.84
PLOD3-209ENST00000460475 SCAF11Q99590 1463 aaKnown RBP26.54■■□□□ 1.84
PLOD3-209ENST00000460475 LTKP29376 864 aa26.53■■□□□ 1.84
PLOD3-209ENST00000460475 MYO5BQ9ULV0 1848 aa26.52■■□□□ 1.84
PLOD3-209ENST00000460475 TXNDC2Q86VQ3 553 aa26.51■■□□□ 1.83
PLOD3-209ENST00000460475 IQGAP1P46940 1657 aa26.5■■□□□ 1.83
PLOD3-209ENST00000460475 RAB3GAP2Q9H2M9 1393 aa26.5■■□□□ 1.83
PLOD3-209ENST00000460475 EID1Q9Y6B2 187 aa26.5■■□□□ 1.83
PLOD3-209ENST00000460475 LTBP4Q8N2S1 1624 aa26.5■■□□□ 1.83
PLOD3-209ENST00000460475 TRPM2O94759 1503 aa26.49■■□□□ 1.83
PLOD3-209ENST00000460475 HRCP23327 699 aa26.48■■□□□ 1.83
PLOD3-209ENST00000460475 MPHOSPH9Q99550 1183 aa26.47■■□□□ 1.83
PLOD3-209ENST00000460475 ZFYVE9O95405 1425 aa26.47■■□□□ 1.83
PLOD3-209ENST00000460475 CERKQ8TCT0 537 aa26.45■■□□□ 1.82
PLOD3-209ENST00000460475 ZNF335Q9H4Z2 1342 aaPredicted RBP26.44■■□□□ 1.82
PLOD3-209ENST00000460475 CLTCL1P53675 1640 aa26.43■■□□□ 1.82
PLOD3-209ENST00000460475 RIMS2Q9UQ26 1411 aa26.41■■□□□ 1.82
PLOD3-209ENST00000460475 CHGAP10645 457 aaKnown RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms