RNA–Protein interactions for RNA: ENST00000460430.5

CDHR4-203, Transcript of cadherin related family member 4, humanhuman

TSL 3

Gene CDHR4, Length 665 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-203ENST00000460430 DEPDC5O75140 1603 aa15.87■□□□□ 0.13
CDHR4-203ENST00000460430 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
CDHR4-203ENST00000460430 SIGLEC1Q9BZZ2 1709 aa15.87■□□□□ 0.13
CDHR4-203ENST00000460430 PRDM15P57071 1507 aaPredicted RBP15.87■□□□□ 0.13
CDHR4-203ENST00000460430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDHR4-203ENST00000460430 KANK1Q14678 1352 aa15.86■□□□□ 0.13
CDHR4-203ENST00000460430 HRCP23327 699 aa15.85■□□□□ 0.13
CDHR4-203ENST00000460430 NUP155O75694 1391 aa15.84■□□□□ 0.13
CDHR4-203ENST00000460430 KDM5DQ9BY66 1539 aa15.84■□□□□ 0.13
CDHR4-203ENST00000460430 MROH1Q8NDA8 1641 aa15.83■□□□□ 0.13
CDHR4-203ENST00000460430 GGT6Q6P531 493 aa15.83■□□□□ 0.12
CDHR4-203ENST00000460430 MLECQ14165 292 aa15.82■□□□□ 0.12
CDHR4-203ENST00000460430 IQGAP3Q86VI3 1631 aa15.82■□□□□ 0.12
CDHR4-203ENST00000460430 FAM135AQ9P2D6 1515 aa15.81■□□□□ 0.12
CDHR4-203ENST00000460430 ZC3H13Q5T200 1668 aaKnown RBP15.8■□□□□ 0.12
CDHR4-203ENST00000460430 VWDEQ8N2E2 1590 aa15.79■□□□□ 0.12
CDHR4-203ENST00000460430 PZPP20742 1482 aa15.78■□□□□ 0.12
CDHR4-203ENST00000460430 CEP152O94986 1710 aa15.78■□□□□ 0.12
CDHR4-203ENST00000460430 ESF1Q9H501 851 aaKnown RBP15.78■□□□□ 0.12
CDHR4-203ENST00000460430 ABCC3O15438 1527 aa15.78■□□□□ 0.12
CDHR4-203ENST00000460430 WASHC2CQ9Y4E1 1318 aa15.77■□□□□ 0.12
CDHR4-203ENST00000460430 SLC4A1APQ9BWU0 796 aaKnown RBP15.77■□□□□ 0.12
CDHR4-203ENST00000460430 TET3O43151 1660 aa15.76■□□□□ 0.11
CDHR4-203ENST00000460430 LMTK2Q8IWU2 1503 aa15.76■□□□□ 0.11
CDHR4-203ENST00000460430 EFCAB6Q5THR3 1501 aa15.75■□□□□ 0.11
CDHR4-203ENST00000460430 PPP6R1Q9UPN7 881 aa15.75■□□□□ 0.11
CDHR4-203ENST00000460430 CAMSAP1Q5T5Y3 1602 aa15.75■□□□□ 0.11
CDHR4-203ENST00000460430 DHX57Q6P158 1386 aaKnown RBP15.75■□□□□ 0.11
CDHR4-203ENST00000460430 CLTCQ00610 1675 aaKnown RBP15.74■□□□□ 0.11
CDHR4-203ENST00000460430 MPHOSPH9Q99550 1183 aa15.74■□□□□ 0.11
CDHR4-203ENST00000460430 FER1L4A9Z1Z3 1794 aa15.74■□□□□ 0.11
CDHR4-203ENST00000460430 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
CDHR4-203ENST00000460430 CCER1Q8TC90 406 aaPredicted RBP15.72■□□□□ 0.11
CDHR4-203ENST00000460430 MADDQ8WXG6 1647 aa15.71■□□□□ 0.11
CDHR4-203ENST00000460430 PKD2Q13563 968 aa15.7■□□□□ 0.1
CDHR4-203ENST00000460430 E9PCH4 1651 aa15.7■□□□□ 0.1
CDHR4-203ENST00000460430 RPRD2Q5VT52 1461 aaKnown RBP15.69■□□□□ 0.1
CDHR4-203ENST00000460430 MROH2AA6NES4 1674 aa15.69■□□□□ 0.1
CDHR4-203ENST00000460430 ADAMTSL3P82987 1691 aa15.69■□□□□ 0.1
CDHR4-203ENST00000460430 RIMS1Q86UR5 1692 aaKnown RBP15.68■□□□□ 0.1
CDHR4-203ENST00000460430 NPATQ14207 1427 aa15.68■□□□□ 0.1
CDHR4-203ENST00000460430 FOXD1Q16676 465 aa15.67■□□□□ 0.1
CDHR4-203ENST00000460430 ARHGAP31Q2M1Z3 1444 aa15.67■□□□□ 0.1
CDHR4-203ENST00000460430 SPHKAPQ2M3C7 1700 aa15.64■□□□□ 0.09
CDHR4-203ENST00000460430 ZMYM3Q14202 1370 aa15.63■□□□□ 0.09
CDHR4-203ENST00000460430 PREX1Q8TCU6 1659 aa15.63■□□□□ 0.09
CDHR4-203ENST00000460430 TRPM2O94759 1503 aa15.63■□□□□ 0.09
CDHR4-203ENST00000460430 ERVK-7P63135 1459 aa15.62■□□□□ 0.09
CDHR4-203ENST00000460430 C3P01024 1663 aa15.62■□□□□ 0.09
CDHR4-203ENST00000460430 CLSPNQ9HAW4 1339 aa15.62■□□□□ 0.09
CDHR4-203ENST00000460430 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
CDHR4-203ENST00000460430 CCDC144AA2RUR9 1427 aa15.6■□□□□ 0.09
CDHR4-203ENST00000460430 SPATA31D1Q6ZQQ2 1576 aa15.6■□□□□ 0.09
CDHR4-203ENST00000460430 ANKRD30BQ9BXX2 1392 aa15.6■□□□□ 0.09
CDHR4-203ENST00000460430 PTPRTO14522 1441 aa15.6■□□□□ 0.09
CDHR4-203ENST00000460430 NOS1P29475 1434 aa15.59■□□□□ 0.09
CDHR4-203ENST00000460430 PTPRMP28827 1452 aa15.58■□□□□ 0.08
CDHR4-203ENST00000460430 SYNMO15061 1565 aa15.58■□□□□ 0.08
CDHR4-203ENST00000460430 FBXO31Q5XUX0 539 aaPredicted RBP15.57■□□□□ 0.08
CDHR4-203ENST00000460430 PLA2R1Q13018 1463 aa15.57■□□□□ 0.08
CDHR4-203ENST00000460430 CEBPAP49715 358 aaPredicted RBP15.56■□□□□ 0.08
CDHR4-203ENST00000460430 TNRQ92752 1358 aa15.56■□□□□ 0.08
CDHR4-203ENST00000460430 UGGT1Q9NYU2 1555 aa15.56■□□□□ 0.08
CDHR4-203ENST00000460430 CLTCL1P53675 1640 aa15.56■□□□□ 0.08
CDHR4-203ENST00000460430 CFAP65Q6ZU64 1925 aaKnown RBP15.55■□□□□ 0.08
CDHR4-203ENST00000460430 NEUROD1Q13562 356 aa15.54■□□□□ 0.08
CDHR4-203ENST00000460430 SIN3AQ96ST3 1273 aa15.53■□□□□ 0.08
CDHR4-203ENST00000460430 PIK3C2BO00750 1634 aa15.53■□□□□ 0.08
CDHR4-203ENST00000460430 KDM4FA0A1W2PPD8 638 aa15.52■□□□□ 0.08
CDHR4-203ENST00000460430 SLC52A1Q9NWF4 448 aa15.52■□□□□ 0.08
CDHR4-203ENST00000460430 MYO3AQ8NEV4 1616 aa15.51■□□□□ 0.07
CDHR4-203ENST00000460430 TONSLQ96HA7 1378 aa15.5■□□□□ 0.07
CDHR4-203ENST00000460430 CHGAP10645 457 aaKnown RBP15.5■□□□□ 0.07
CDHR4-203ENST00000460430 NLRP1Q9C000 1473 aa15.5■□□□□ 0.07
CDHR4-203ENST00000460430 KIF1BO60333 1816 aa15.5■□□□□ 0.07
CDHR4-203ENST00000460430 ADGRB3O60242 1522 aa15.49■□□□□ 0.07
CDHR4-203ENST00000460430 STAG3Q9UJ98 1225 aa15.48■□□□□ 0.07
CDHR4-203ENST00000460430 IDI1Q13907 227 aa15.47■□□□□ 0.07
CDHR4-203ENST00000460430 NEURL4Q96JN8 1562 aa15.45■□□□□ 0.06
CDHR4-203ENST00000460430 CEP170BQ9Y4F5 1589 aaPredicted RBP15.45■□□□□ 0.06
CDHR4-203ENST00000460430 UHRF1BP1Q6BDS2 1440 aa15.45■□□□□ 0.06
CDHR4-203ENST00000460430 SPATA31E1Q6ZUB1 1445 aa15.45■□□□□ 0.06
CDHR4-203ENST00000460430 A2ML1A8K2U0 1454 aa15.45■□□□□ 0.06
CDHR4-203ENST00000460430 TMEM131LA2VDJ0 1609 aa15.44■□□□□ 0.06
CDHR4-203ENST00000460430 ZNF326Q5BKZ1 582 aaKnown RBP15.44■□□□□ 0.06
CDHR4-203ENST00000460430 ZNF142P52746 1687 aaPredicted RBP15.44■□□□□ 0.06
CDHR4-203ENST00000460430 RGL3Q3MIN7 710 aa15.43■□□□□ 0.06
CDHR4-203ENST00000460430 KDM5AP29375 1690 aaKnown RBP15.43■□□□□ 0.06
CDHR4-203ENST00000460430 UBR1Q8IWV7 1749 aa15.43■□□□□ 0.06
CDHR4-203ENST00000460430 ZEB1P37275 1124 aaPredicted RBP15.41■□□□□ 0.06
CDHR4-203ENST00000460430 MYO5BQ9ULV0 1848 aa15.4■□□□□ 0.06
CDHR4-203ENST00000460430 TIMELESSQ9UNS1 1208 aa15.4■□□□□ 0.06
CDHR4-203ENST00000460430 L3MBTL2Q969R5 705 aa15.38■□□□□ 0.05
CDHR4-203ENST00000460430 SETD1BQ9UPS6 1966 aaKnown RBP15.38■□□□□ 0.05
CDHR4-203ENST00000460430 NEXMIFQ5QGS0 1516 aa15.38■□□□□ 0.05
CDHR4-203ENST00000460430 DCAF11Q8TEB1 546 aa15.37■□□□□ 0.05
CDHR4-203ENST00000460430 RPGRIP1LQ68CZ1 1315 aa15.37■□□□□ 0.05
CDHR4-203ENST00000460430 IFT172Q9UG01 1749 aa15.37■□□□□ 0.05
CDHR4-203ENST00000460430 PPLO60437 1756 aa15.36■□□□□ 0.05
CDHR4-203ENST00000460430 RIMS2Q9UQ26 1411 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms