RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 EIF2AK4Q9P2K8 1649 aaKnown RBP32.64■■■□□ 2.82
ABCD4-202ENST00000460308 WASHC2CQ9Y4E1 1318 aa32.64■■■□□ 2.82
ABCD4-202ENST00000460308 C3P01024 1663 aa32.63■■■□□ 2.81
ABCD4-202ENST00000460308 ADGRL2O95490 1459 aa32.63■■■□□ 2.81
ABCD4-202ENST00000460308 ERBINQ96RT1 1412 aa32.62■■■□□ 2.81
ABCD4-202ENST00000460308 RRBP1Q9P2E9 1410 aaKnown RBP32.62■■■□□ 2.81
ABCD4-202ENST00000460308 MROH2AA6NES4 1674 aa32.61■■■□□ 2.81
ABCD4-202ENST00000460308 PTPRKQ15262 1439 aa32.6■■■□□ 2.81
ABCD4-202ENST00000460308 SETD1BQ9UPS6 1966 aaKnown RBP32.58■■■□□ 2.81
ABCD4-202ENST00000460308 RNF17Q9BXT8 1623 aaKnown RBP32.57■■■□□ 2.8
ABCD4-202ENST00000460308 FAM135AQ9P2D6 1515 aa32.56■■■□□ 2.8
ABCD4-202ENST00000460308 KDM5DQ9BY66 1539 aa32.55■■■□□ 2.8
ABCD4-202ENST00000460308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.53■■■□□ 2.83e-10■■□□□ 13
ABCD4-202ENST00000460308 ROCK1Q13464 1354 aa32.53■■■□□ 2.8
ABCD4-202ENST00000460308 ANKRD50Q9ULJ7 1429 aa32.5■■■□□ 2.79
ABCD4-202ENST00000460308 LMTK3Q96Q04 1460 aa32.48■■■□□ 2.79
ABCD4-202ENST00000460308 NPATQ14207 1427 aa32.48■■■□□ 2.79
ABCD4-202ENST00000460308 KANK1Q14678 1352 aa32.47■■■□□ 2.79
ABCD4-202ENST00000460308 PREX1Q8TCU6 1659 aa32.47■■■□□ 2.79
ABCD4-202ENST00000460308 UHRF1BP1Q6BDS2 1440 aa32.46■■■□□ 2.79
ABCD4-202ENST00000460308 MROH1Q8NDA8 1641 aa32.44■■■□□ 2.78
ABCD4-202ENST00000460308 ABCC3O15438 1527 aa32.44■■■□□ 2.78
ABCD4-202ENST00000460308 ZC3H13Q5T200 1668 aaKnown RBP32.43■■■□□ 2.78
ABCD4-202ENST00000460308 HSPA2P54652 639 aa32.42■■■□□ 2.78
ABCD4-202ENST00000460308 PRDM15P57071 1507 aaPredicted RBP32.41■■■□□ 2.78
ABCD4-202ENST00000460308 PZPP20742 1482 aa32.4■■■□□ 2.78
ABCD4-202ENST00000460308 DEPDC5O75140 1603 aa32.4■■■□□ 2.78
ABCD4-202ENST00000460308 FBXO31Q5XUX0 539 aaPredicted RBP32.39■■■□□ 2.78
ABCD4-202ENST00000460308 CEP152O94986 1710 aa32.38■■■□□ 2.77
ABCD4-202ENST00000460308 CAMSAP1Q5T5Y3 1602 aa32.33■■■□□ 2.77
ABCD4-202ENST00000460308 TNRQ92752 1358 aa32.32■■■□□ 2.77
ABCD4-202ENST00000460308 CFAP65Q6ZU64 1925 aaKnown RBP32.3■■■□□ 2.76
ABCD4-202ENST00000460308 VWDEQ8N2E2 1590 aa32.27■■■□□ 2.76
ABCD4-202ENST00000460308 ARHGAP31Q2M1Z3 1444 aa32.26■■■□□ 2.76
ABCD4-202ENST00000460308 MYO3AQ8NEV4 1616 aa32.26■■■□□ 2.75
ABCD4-202ENST00000460308 LMTK2Q8IWU2 1503 aa32.25■■■□□ 2.75
ABCD4-202ENST00000460308 UNC13BO14795 1591 aa32.23■■■□□ 2.75
ABCD4-202ENST00000460308 NAIPQ13075 1403 aa32.22■■■□□ 2.75
ABCD4-202ENST00000460308 ERVK-7P63135 1459 aa32.22■■■□□ 2.75
ABCD4-202ENST00000460308 NUP155O75694 1391 aa32.21■■■□□ 2.75
ABCD4-202ENST00000460308 CEP170BQ9Y4F5 1589 aaPredicted RBP32.2■■■□□ 2.75
ABCD4-202ENST00000460308 A2ML1A8K2U0 1454 aa32.2■■■□□ 2.75
ABCD4-202ENST00000460308 SPATA31D1Q6ZQQ2 1576 aa32.19■■■□□ 2.74
ABCD4-202ENST00000460308 HFM1A2PYH4 1435 aa32.18■■■□□ 2.74
ABCD4-202ENST00000460308 ZNF142P52746 1687 aaPredicted RBP32.18■■■□□ 2.74
ABCD4-202ENST00000460308 GCC2Q8IWJ2 1684 aa32.18■■■□□ 2.74
ABCD4-202ENST00000460308 NLRP1Q9C000 1473 aa32.17■■■□□ 2.74
ABCD4-202ENST00000460308 EFCAB6Q5THR3 1501 aa32.15■■■□□ 2.74
ABCD4-202ENST00000460308 TET3O43151 1660 aa32.13■■■□□ 2.73
ABCD4-202ENST00000460308 DMRT2Q9Y5R5 561 aa32.13■■■□□ 2.73
ABCD4-202ENST00000460308 IQGAP3Q86VI3 1631 aa32.11■■■□□ 2.73
ABCD4-202ENST00000460308 THEMISQ8N1K5 641 aaPredicted RBP32.11■■■□□ 2.73
ABCD4-202ENST00000460308 TRIM52Q96A61 297 aa32.1■■■□□ 2.73
ABCD4-202ENST00000460308 RPRD2Q5VT52 1461 aaKnown RBP32.09■■■□□ 2.73
ABCD4-202ENST00000460308 UGGT1Q9NYU2 1555 aa32.07■■■□□ 2.72
ABCD4-202ENST00000460308 STRCQ7RTU9 1775 aa32.07■■■□□ 2.72
ABCD4-202ENST00000460308 PLA2R1Q13018 1463 aa32.04■■■□□ 2.72
ABCD4-202ENST00000460308 PKD2Q13563 968 aa32.04■■■□□ 2.72
ABCD4-202ENST00000460308 STAG3Q9UJ98 1225 aa32.04■■■□□ 2.72
ABCD4-202ENST00000460308 NCKAP5LQ9HCH0 1330 aa32.03■■■□□ 2.72
ABCD4-202ENST00000460308 NOS1P29475 1434 aa32.03■■■□□ 2.72
ABCD4-202ENST00000460308 SLC52A1Q9NWF4 448 aa32.01■■■□□ 2.71
ABCD4-202ENST00000460308 E9PCH4 1651 aa32■■■□□ 2.71
ABCD4-202ENST00000460308 IDI1Q13907 227 aa32■■■□□ 2.71
ABCD4-202ENST00000460308 ANKLE2Q86XL3 938 aa31.98■■■□□ 2.71
ABCD4-202ENST00000460308 SYNMO15061 1565 aa31.97■■■□□ 2.71
ABCD4-202ENST00000460308 PTPRTO14522 1441 aa31.95■■■□□ 2.71
ABCD4-202ENST00000460308 SETD5Q9C0A6 1442 aa31.95■■■□□ 2.71
ABCD4-202ENST00000460308 PIK3C2BO00750 1634 aa31.93■■■□□ 2.7
ABCD4-202ENST00000460308 UBR1Q8IWV7 1749 aa31.93■■■□□ 2.7
ABCD4-202ENST00000460308 SLC4A1APQ9BWU0 796 aaKnown RBP31.93■■■□□ 2.7
ABCD4-202ENST00000460308 ACIN1Q9UKV3 1341 aaKnown RBP31.93■■■□□ 2.7
ABCD4-202ENST00000460308 POLR1AO95602 1720 aaPredicted RBP31.86■■■□□ 2.69
ABCD4-202ENST00000460308 CHGAP10645 457 aaKnown RBP31.86■■■□□ 2.69
ABCD4-202ENST00000460308 EID1Q9Y6B2 187 aa31.86■■■□□ 2.69
ABCD4-202ENST00000460308 KDM5AP29375 1690 aaKnown RBP31.84■■■□□ 2.69
ABCD4-202ENST00000460308 TXNDC2Q86VQ3 553 aa31.84■■■□□ 2.69
ABCD4-202ENST00000460308 RAB3GAP2Q9H2M9 1393 aa31.82■■■□□ 2.69
ABCD4-202ENST00000460308 TMEM2Q9UHN6 1383 aa31.81■■■□□ 2.68
ABCD4-202ENST00000460308 ADGRB3O60242 1522 aa31.81■■■□□ 2.68
ABCD4-202ENST00000460308 SPHKAPQ2M3C7 1700 aa31.81■■■□□ 2.68
ABCD4-202ENST00000460308 MPHOSPH9Q99550 1183 aa31.8■■■□□ 2.68
ABCD4-202ENST00000460308 SLIT1O75093 1534 aa31.8■■■□□ 2.68
ABCD4-202ENST00000460308 ARHGAP23Q9P227 1491 aa31.78■■■□□ 2.68
ABCD4-202ENST00000460308 NPHP4O75161 1426 aaPredicted RBP31.78■■■□□ 2.68
ABCD4-202ENST00000460308 LTKP29376 864 aa31.78■■■□□ 2.68
ABCD4-202ENST00000460308 NEURL4Q96JN8 1562 aa31.77■■■□□ 2.68
ABCD4-202ENST00000460308 SCAF11Q99590 1463 aaKnown RBP31.77■■■□□ 2.68
ABCD4-202ENST00000460308 HDGFP51858 240 aaKnown RBP31.76■■■□□ 2.67
ABCD4-202ENST00000460308 MED14O60244 1454 aa31.76■■■□□ 2.67
ABCD4-202ENST00000460308 MYO5BQ9ULV0 1848 aa31.72■■■□□ 2.67
ABCD4-202ENST00000460308 TMEM131LA2VDJ0 1609 aa31.72■■■□□ 2.67
ABCD4-202ENST00000460308 FOXD1Q16676 465 aa31.72■■■□□ 2.67
ABCD4-202ENST00000460308 HRCP23327 699 aa31.71■■■□□ 2.67
ABCD4-202ENST00000460308 IQGAP1P46940 1657 aa31.7■■■□□ 2.67
ABCD4-202ENST00000460308 TRPM2O94759 1503 aa31.7■■■□□ 2.66
ABCD4-202ENST00000460308 PPP1R15AO75807 674 aaPredicted RBP31.68■■■□□ 2.66
ABCD4-202ENST00000460308 CERKQ8TCT0 537 aa31.68■■■□□ 2.66
ABCD4-202ENST00000460308 ZNF335Q9H4Z2 1342 aaPredicted RBP31.68■■■□□ 2.66
ABCD4-202ENST00000460308 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms