RNA–Protein interactions for RNA: ENST00000460100.1

IMP4-207, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-207ENST00000460100 ERBINQ96RT1 1412 aa22.19■■□□□ 1.14
IMP4-207ENST00000460100 C3P01024 1663 aa22.18■■□□□ 1.14
IMP4-207ENST00000460100 FAM135AQ9P2D6 1515 aa22.18■■□□□ 1.14
IMP4-207ENST00000460100 CEBPAP49715 358 aaPredicted RBP22.16■■□□□ 1.14
IMP4-207ENST00000460100 CLTCQ00610 1675 aaKnown RBP22.16■■□□□ 1.14
IMP4-207ENST00000460100 ROCK1Q13464 1354 aa22.15■■□□□ 1.14
IMP4-207ENST00000460100 ZMYM3Q14202 1370 aa22.15■■□□□ 1.14
IMP4-207ENST00000460100 ESF1Q9H501 851 aaKnown RBP22.15■■□□□ 1.14
IMP4-207ENST00000460100 MROH1Q8NDA8 1641 aa22.15■■□□□ 1.14
IMP4-207ENST00000460100 KDM5DQ9BY66 1539 aa22.12■■□□□ 1.13
IMP4-207ENST00000460100 SETD1BQ9UPS6 1966 aaKnown RBP22.12■■□□□ 1.13
IMP4-207ENST00000460100 DEPDC5O75140 1603 aa22.11■■□□□ 1.13
IMP4-207ENST00000460100 PRDM15P57071 1507 aaPredicted RBP22.09■■□□□ 1.13
IMP4-207ENST00000460100 LMTK3Q96Q04 1460 aa22.09■■□□□ 1.13
IMP4-207ENST00000460100 NPATQ14207 1427 aa22.08■■□□□ 1.13
IMP4-207ENST00000460100 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.13
IMP4-207ENST00000460100 WASHC2CQ9Y4E1 1318 aa22.07■■□□□ 1.12
IMP4-207ENST00000460100 ANKRD50Q9ULJ7 1429 aa22.07■■□□□ 1.12
IMP4-207ENST00000460100 ABCC3O15438 1527 aa22.07■■□□□ 1.12
IMP4-207ENST00000460100 ZC3H13Q5T200 1668 aaKnown RBP22.07■■□□□ 1.12
IMP4-207ENST00000460100 ITGAEP38570 1179 aa22.05■■□□□ 1.12
IMP4-207ENST00000460100 PREX1Q8TCU6 1659 aa22.04■■□□□ 1.12
IMP4-207ENST00000460100 VWDEQ8N2E2 1590 aa22.04■■□□□ 1.12
IMP4-207ENST00000460100 PZPP20742 1482 aa22.03■■□□□ 1.12
IMP4-207ENST00000460100 CEP152O94986 1710 aa22■■□□□ 1.11
IMP4-207ENST00000460100 LMTK2Q8IWU2 1503 aa22■■□□□ 1.11
IMP4-207ENST00000460100 CAMSAP1Q5T5Y3 1602 aa21.98■■□□□ 1.11
IMP4-207ENST00000460100 ARHGAP31Q2M1Z3 1444 aa21.97■■□□□ 1.11
IMP4-207ENST00000460100 UHRF1BP1Q6BDS2 1440 aa21.97■■□□□ 1.11
IMP4-207ENST00000460100 UNC13BO14795 1591 aa21.97■■□□□ 1.11
IMP4-207ENST00000460100 FBXO31Q5XUX0 539 aaPredicted RBP21.97■■□□□ 1.11
IMP4-207ENST00000460100 KANK1Q14678 1352 aa21.96■■□□□ 1.11
IMP4-207ENST00000460100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.95■■□□□ 1.1
IMP4-207ENST00000460100 NAIPQ13075 1403 aa21.95■■□□□ 1.1
IMP4-207ENST00000460100 HFM1A2PYH4 1435 aa21.93■■□□□ 1.1
IMP4-207ENST00000460100 SPATA31D1Q6ZQQ2 1576 aa21.93■■□□□ 1.1
IMP4-207ENST00000460100 MYO3AQ8NEV4 1616 aa21.93■■□□□ 1.1
IMP4-207ENST00000460100 GCC2Q8IWJ2 1684 aa21.92■■□□□ 1.1
IMP4-207ENST00000460100 HSPA2P54652 639 aa21.92■■□□□ 1.1
IMP4-207ENST00000460100 ZNF142P52746 1687 aaPredicted RBP21.91■■□□□ 1.1
IMP4-207ENST00000460100 ERVK-7P63135 1459 aa21.9■■□□□ 1.1
IMP4-207ENST00000460100 TNRQ92752 1358 aa21.9■■□□□ 1.1
IMP4-207ENST00000460100 EFCAB6Q5THR3 1501 aa21.89■■□□□ 1.09
IMP4-207ENST00000460100 IQGAP3Q86VI3 1631 aa21.88■■□□□ 1.09
IMP4-207ENST00000460100 CEP170BQ9Y4F5 1589 aaPredicted RBP21.87■■□□□ 1.09
IMP4-207ENST00000460100 CFAP65Q6ZU64 1925 aaKnown RBP21.86■■□□□ 1.09
IMP4-207ENST00000460100 TET3O43151 1660 aa21.86■■□□□ 1.09
IMP4-207ENST00000460100 A2ML1A8K2U0 1454 aa21.86■■□□□ 1.09
IMP4-207ENST00000460100 NLRP1Q9C000 1473 aa21.85■■□□□ 1.09
IMP4-207ENST00000460100 RPRD2Q5VT52 1461 aaKnown RBP21.83■■□□□ 1.09
IMP4-207ENST00000460100 NUP155O75694 1391 aa21.83■■□□□ 1.08
IMP4-207ENST00000460100 NOS1P29475 1434 aa21.82■■□□□ 1.08
IMP4-207ENST00000460100 STRCQ7RTU9 1775 aa21.82■■□□□ 1.08
IMP4-207ENST00000460100 E9PCH4 1651 aa21.79■■□□□ 1.08
IMP4-207ENST00000460100 PLA2R1Q13018 1463 aa21.78■■□□□ 1.08
IMP4-207ENST00000460100 SYNMO15061 1565 aa21.78■■□□□ 1.08
IMP4-207ENST00000460100 UGGT1Q9NYU2 1555 aa21.75■■□□□ 1.07
IMP4-207ENST00000460100 UBR1Q8IWV7 1749 aa21.72■■□□□ 1.07
IMP4-207ENST00000460100 THEMISQ8N1K5 641 aaPredicted RBP21.72■■□□□ 1.07
IMP4-207ENST00000460100 IDI1Q13907 227 aa21.71■■□□□ 1.07
IMP4-207ENST00000460100 SLC52A1Q9NWF4 448 aa21.71■■□□□ 1.07
IMP4-207ENST00000460100 KDM5AP29375 1690 aaKnown RBP21.71■■□□□ 1.07
IMP4-207ENST00000460100 SETD5Q9C0A6 1442 aa21.71■■□□□ 1.07
IMP4-207ENST00000460100 PIK3C2BO00750 1634 aa21.7■■□□□ 1.06
IMP4-207ENST00000460100 PTPRTO14522 1441 aa21.7■■□□□ 1.06
IMP4-207ENST00000460100 PKD2Q13563 968 aa21.69■■□□□ 1.06
IMP4-207ENST00000460100 DMRT2Q9Y5R5 561 aa21.69■■□□□ 1.06
IMP4-207ENST00000460100 NCKAP5LQ9HCH0 1330 aa21.67■■□□□ 1.06
IMP4-207ENST00000460100 ARHGAP23Q9P227 1491 aa21.66■■□□□ 1.06
IMP4-207ENST00000460100 ACIN1Q9UKV3 1341 aaKnown RBP21.66■■□□□ 1.06
IMP4-207ENST00000460100 TRIM52Q96A61 297 aa21.66■■□□□ 1.06
IMP4-207ENST00000460100 SLIT1O75093 1534 aa21.65■■□□□ 1.06
IMP4-207ENST00000460100 POLR1AO95602 1720 aaPredicted RBP21.64■■□□□ 1.06
IMP4-207ENST00000460100 NEURL4Q96JN8 1562 aa21.64■■□□□ 1.05
IMP4-207ENST00000460100 SPHKAPQ2M3C7 1700 aa21.63■■□□□ 1.05
IMP4-207ENST00000460100 RAB3GAP2Q9H2M9 1393 aa21.63■■□□□ 1.05
IMP4-207ENST00000460100 ADGRB3O60242 1522 aa21.63■■□□□ 1.05
IMP4-207ENST00000460100 MED14O60244 1454 aa21.63■■□□□ 1.05
IMP4-207ENST00000460100 HRCP23327 699 aa21.62■■□□□ 1.05
IMP4-207ENST00000460100 ANKLE2Q86XL3 938 aa21.62■■□□□ 1.05
IMP4-207ENST00000460100 SLC4A1APQ9BWU0 796 aaKnown RBP21.61■■□□□ 1.05
IMP4-207ENST00000460100 TMEM131LA2VDJ0 1609 aa21.61■■□□□ 1.05
IMP4-207ENST00000460100 TMEM2Q9UHN6 1383 aa21.61■■□□□ 1.05
IMP4-207ENST00000460100 TRPM2O94759 1503 aa21.59■■□□□ 1.05
IMP4-207ENST00000460100 MPHOSPH9Q99550 1183 aa21.58■■□□□ 1.05
IMP4-207ENST00000460100 MYO5BQ9ULV0 1848 aa21.57■■□□□ 1.04
IMP4-207ENST00000460100 LTKP29376 864 aa21.56■■□□□ 1.04
IMP4-207ENST00000460100 STAG3Q9UJ98 1225 aa21.56■■□□□ 1.04
IMP4-207ENST00000460100 SCAF11Q99590 1463 aaKnown RBP21.55■■□□□ 1.04
IMP4-207ENST00000460100 NPHP4O75161 1426 aaPredicted RBP21.55■■□□□ 1.04
IMP4-207ENST00000460100 TXNDC2Q86VQ3 553 aa21.53■■□□□ 1.04
IMP4-207ENST00000460100 CLTCL1P53675 1640 aa21.53■■□□□ 1.04
IMP4-207ENST00000460100 ZFYVE9O95405 1425 aa21.53■■□□□ 1.04
IMP4-207ENST00000460100 IQGAP1P46940 1657 aa21.52■■□□□ 1.04
IMP4-207ENST00000460100 FOXD1Q16676 465 aa21.5■■□□□ 1.03
IMP4-207ENST00000460100 EID1Q9Y6B2 187 aa21.5■■□□□ 1.03
IMP4-207ENST00000460100 LTBP4Q8N2S1 1624 aa21.5■■□□□ 1.03
IMP4-207ENST00000460100 RIMS2Q9UQ26 1411 aa21.47■■□□□ 1.03
IMP4-207ENST00000460100 KIF1BO60333 1816 aa21.45■■□□□ 1.03
IMP4-207ENST00000460100 CHGAP10645 457 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms