RNA–Protein interactions for RNA: ENST00000460007.1

SVIL-204, Transcript of supervillin, humanhuman

TSL 3

Gene SVIL, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-204ENST00000460007 ERBINQ96RT1 1412 aa28.83■■■□□ 2.21
SVIL-204ENST00000460007 PTPRKQ15262 1439 aa28.81■■■□□ 2.2
SVIL-204ENST00000460007 ITGAEP38570 1179 aa28.81■■■□□ 2.2
SVIL-204ENST00000460007 CLTCQ00610 1675 aaKnown RBP28.8■■■□□ 2.2
SVIL-204ENST00000460007 ZMYM3Q14202 1370 aa28.8■■■□□ 2.2
SVIL-204ENST00000460007 MROH2AA6NES4 1674 aa28.8■■■□□ 2.2
SVIL-204ENST00000460007 C3P01024 1663 aa28.79■■■□□ 2.2
SVIL-204ENST00000460007 RNF17Q9BXT8 1623 aaKnown RBP28.79■■■□□ 2.2
SVIL-204ENST00000460007 FAM135AQ9P2D6 1515 aa28.78■■■□□ 2.2
SVIL-204ENST00000460007 WASHC2CQ9Y4E1 1318 aa28.77■■■□□ 2.2
SVIL-204ENST00000460007 KDM5DQ9BY66 1539 aa28.77■■■□□ 2.2
SVIL-204ENST00000460007 ROCK1Q13464 1354 aa28.75■■■□□ 2.19
SVIL-204ENST00000460007 LMTK3Q96Q04 1460 aa28.71■■■□□ 2.19
SVIL-204ENST00000460007 ANKRD50Q9ULJ7 1429 aa28.7■■■□□ 2.19
SVIL-204ENST00000460007 MROH1Q8NDA8 1641 aa28.7■■■□□ 2.19
SVIL-204ENST00000460007 NPATQ14207 1427 aa28.69■■■□□ 2.18
SVIL-204ENST00000460007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.67■■■□□ 2.18
SVIL-204ENST00000460007 ABCC3O15438 1527 aa28.67■■■□□ 2.18
SVIL-204ENST00000460007 PRDM15P57071 1507 aaPredicted RBP28.67■■■□□ 2.18
SVIL-204ENST00000460007 ZC3H13Q5T200 1668 aaKnown RBP28.65■■■□□ 2.18
SVIL-204ENST00000460007 PREX1Q8TCU6 1659 aa28.65■■■□□ 2.18
SVIL-204ENST00000460007 SETD1BQ9UPS6 1966 aaKnown RBP28.65■■■□□ 2.18
SVIL-204ENST00000460007 UHRF1BP1Q6BDS2 1440 aa28.65■■■□□ 2.18
SVIL-204ENST00000460007 KANK1Q14678 1352 aa28.64■■■□□ 2.18
SVIL-204ENST00000460007 DEPDC5O75140 1603 aa28.64■■■□□ 2.18
SVIL-204ENST00000460007 PZPP20742 1482 aa28.63■■■□□ 2.17
SVIL-204ENST00000460007 CEP152O94986 1710 aa28.58■■■□□ 2.17
SVIL-204ENST00000460007 HSPA2P54652 639 aa28.58■■■□□ 2.17
SVIL-204ENST00000460007 FBXO31Q5XUX0 539 aaPredicted RBP28.57■■■□□ 2.16
SVIL-204ENST00000460007 CAMSAP1Q5T5Y3 1602 aa28.55■■■□□ 2.16
SVIL-204ENST00000460007 VWDEQ8N2E2 1590 aa28.54■■■□□ 2.16
SVIL-204ENST00000460007 TNRQ92752 1358 aa28.53■■■□□ 2.16
SVIL-204ENST00000460007 LMTK2Q8IWU2 1503 aa28.51■■■□□ 2.15
SVIL-204ENST00000460007 MYO3AQ8NEV4 1616 aa28.51■■■□□ 2.15
SVIL-204ENST00000460007 ARHGAP31Q2M1Z3 1444 aa28.5■■■□□ 2.15
SVIL-204ENST00000460007 UNC13BO14795 1591 aa28.49■■■□□ 2.15
SVIL-204ENST00000460007 NAIPQ13075 1403 aa28.48■■■□□ 2.15
SVIL-204ENST00000460007 ERVK-7P63135 1459 aa28.47■■■□□ 2.15
SVIL-204ENST00000460007 SPATA31D1Q6ZQQ2 1576 aa28.45■■■□□ 2.15
SVIL-204ENST00000460007 HFM1A2PYH4 1435 aa28.45■■■□□ 2.15
SVIL-204ENST00000460007 CEP170BQ9Y4F5 1589 aaPredicted RBP28.45■■■□□ 2.14
SVIL-204ENST00000460007 ZNF142P52746 1687 aaPredicted RBP28.43■■■□□ 2.14
SVIL-204ENST00000460007 GCC2Q8IWJ2 1684 aa28.43■■■□□ 2.14
SVIL-204ENST00000460007 A2ML1A8K2U0 1454 aa28.43■■■□□ 2.14
SVIL-204ENST00000460007 EFCAB6Q5THR3 1501 aa28.43■■■□□ 2.14
SVIL-204ENST00000460007 NUP155O75694 1391 aa28.42■■■□□ 2.14
SVIL-204ENST00000460007 NLRP1Q9C000 1473 aa28.41■■■□□ 2.14
SVIL-204ENST00000460007 TET3O43151 1660 aa28.38■■■□□ 2.13
SVIL-204ENST00000460007 CFAP65Q6ZU64 1925 aaKnown RBP28.37■■■□□ 2.13
SVIL-204ENST00000460007 IQGAP3Q86VI3 1631 aa28.37■■■□□ 2.13
SVIL-204ENST00000460007 RPRD2Q5VT52 1461 aaKnown RBP28.35■■■□□ 2.13
SVIL-204ENST00000460007 UGGT1Q9NYU2 1555 aa28.3■■■□□ 2.12
SVIL-204ENST00000460007 PLA2R1Q13018 1463 aa28.3■■■□□ 2.12
SVIL-204ENST00000460007 NOS1P29475 1434 aa28.3■■■□□ 2.12
SVIL-204ENST00000460007 THEMISQ8N1K5 641 aaPredicted RBP28.29■■■□□ 2.12
SVIL-204ENST00000460007 TRIM52Q96A61 297 aa28.29■■■□□ 2.12
SVIL-204ENST00000460007 STRCQ7RTU9 1775 aa28.29■■■□□ 2.12
SVIL-204ENST00000460007 DMRT2Q9Y5R5 561 aa28.28■■■□□ 2.12
SVIL-204ENST00000460007 SYNMO15061 1565 aa28.25■■■□□ 2.11
SVIL-204ENST00000460007 E9PCH4 1651 aa28.25■■■□□ 2.11
SVIL-204ENST00000460007 NCKAP5LQ9HCH0 1330 aa28.24■■■□□ 2.11
SVIL-204ENST00000460007 PKD2Q13563 968 aa28.24■■■□□ 2.11
SVIL-204ENST00000460007 IDI1Q13907 227 aa28.22■■■□□ 2.11
SVIL-204ENST00000460007 SLC52A1Q9NWF4 448 aa28.22■■■□□ 2.11
SVIL-204ENST00000460007 SETD5Q9C0A6 1442 aa28.21■■■□□ 2.11
SVIL-204ENST00000460007 STAG3Q9UJ98 1225 aa28.21■■■□□ 2.11
SVIL-204ENST00000460007 PTPRTO14522 1441 aa28.2■■■□□ 2.11
SVIL-204ENST00000460007 PIK3C2BO00750 1634 aa28.19■■■□□ 2.1
SVIL-204ENST00000460007 UBR1Q8IWV7 1749 aa28.18■■■□□ 2.1
SVIL-204ENST00000460007 ANKLE2Q86XL3 938 aa28.18■■■□□ 2.1
SVIL-204ENST00000460007 SLC4A1APQ9BWU0 796 aaKnown RBP28.16■■■□□ 2.1
SVIL-204ENST00000460007 ACIN1Q9UKV3 1341 aaKnown RBP28.15■■■□□ 2.1
SVIL-204ENST00000460007 ADGRB3O60242 1522 aa28.13■■■□□ 2.09
SVIL-204ENST00000460007 RAB3GAP2Q9H2M9 1393 aa28.11■■■□□ 2.09
SVIL-204ENST00000460007 KDM5AP29375 1690 aaKnown RBP28.11■■■□□ 2.09
SVIL-204ENST00000460007 POLR1AO95602 1720 aaPredicted RBP28.11■■■□□ 2.09
SVIL-204ENST00000460007 SLIT1O75093 1534 aa28.09■■■□□ 2.09
SVIL-204ENST00000460007 TMEM2Q9UHN6 1383 aa28.09■■■□□ 2.09
SVIL-204ENST00000460007 ARHGAP23Q9P227 1491 aa28.08■■■□□ 2.09
SVIL-204ENST00000460007 NEURL4Q96JN8 1562 aa28.08■■■□□ 2.09
SVIL-204ENST00000460007 SPHKAPQ2M3C7 1700 aa28.08■■■□□ 2.09
SVIL-204ENST00000460007 CHGAP10645 457 aaKnown RBP28.07■■■□□ 2.08
SVIL-204ENST00000460007 EID1Q9Y6B2 187 aa28.07■■■□□ 2.08
SVIL-204ENST00000460007 TXNDC2Q86VQ3 553 aa28.06■■■□□ 2.08
SVIL-204ENST00000460007 NPHP4O75161 1426 aaPredicted RBP28.06■■■□□ 2.08
SVIL-204ENST00000460007 SCAF11Q99590 1463 aaKnown RBP28.06■■■□□ 2.08
SVIL-204ENST00000460007 MED14O60244 1454 aa28.05■■■□□ 2.08
SVIL-204ENST00000460007 MPHOSPH9Q99550 1183 aa28.05■■■□□ 2.08
SVIL-204ENST00000460007 LTKP29376 864 aa28.03■■■□□ 2.08
SVIL-204ENST00000460007 TRPM2O94759 1503 aa28.02■■■□□ 2.08
SVIL-204ENST00000460007 TMEM131LA2VDJ0 1609 aa28.02■■■□□ 2.08
SVIL-204ENST00000460007 FOXD1Q16676 465 aa27.99■■■□□ 2.07
SVIL-204ENST00000460007 IQGAP1P46940 1657 aa27.97■■■□□ 2.07
SVIL-204ENST00000460007 HRCP23327 699 aa27.97■■■□□ 2.07
SVIL-204ENST00000460007 HDGFP51858 240 aaKnown RBP27.96■■■□□ 2.07
SVIL-204ENST00000460007 CLTCL1P53675 1640 aa27.96■■■□□ 2.07
SVIL-204ENST00000460007 MYO5BQ9ULV0 1848 aa27.95■■■□□ 2.07
SVIL-204ENST00000460007 RIMS2Q9UQ26 1411 aa27.95■■■□□ 2.07
SVIL-204ENST00000460007 ZNF335Q9H4Z2 1342 aaPredicted RBP27.94■■■□□ 2.06
SVIL-204ENST00000460007 ZFYVE9O95405 1425 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms