RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 DNMT1P26358 1616 aaKnown RBP12.79□□□□□ -0.36
HPS4-207ENST00000459918 KIAA1107Q9UPP5 1409 aa12.79□□□□□ -0.36
HPS4-207ENST00000459918 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
HPS4-207ENST00000459918 MED1Q15648 1581 aaPredicted RBP12.77□□□□□ -0.36
HPS4-207ENST00000459918 CPS1P31327 1500 aa12.76□□□□□ -0.37
HPS4-207ENST00000459918 TIAM1Q13009 1591 aa12.76□□□□□ -0.37
HPS4-207ENST00000459918 TOM1O60784 492 aa12.75□□□□□ -0.37
HPS4-207ENST00000459918 EHBP1L1Q8N3D4 1523 aa12.74□□□□□ -0.37
HPS4-207ENST00000459918 KDM5DQ9BY66 1539 aa12.74□□□□□ -0.37
HPS4-207ENST00000459918 TNRQ92752 1358 aa12.73□□□□□ -0.37
HPS4-207ENST00000459918 HSPA1LP34931 641 aa12.73□□□□□ -0.37
HPS4-207ENST00000459918 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
HPS4-207ENST00000459918 SHANK2Q9UPX8 1470 aa12.72□□□□□ -0.37
HPS4-207ENST00000459918 ZNF644Q9H582 1327 aaPredicted RBP12.71□□□□□ -0.37
HPS4-207ENST00000459918 KIF3BO15066 747 aa12.71□□□□□ -0.37
HPS4-207ENST00000459918 WASHC2CQ9Y4E1 1318 aa12.7□□□□□ -0.38
HPS4-207ENST00000459918 PZPP20742 1482 aa12.7□□□□□ -0.38
HPS4-207ENST00000459918 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
HPS4-207ENST00000459918 IQGAP1P46940 1657 aa12.7□□□□□ -0.38
HPS4-207ENST00000459918 UGGT1Q9NYU2 1555 aa12.69□□□□□ -0.38
HPS4-207ENST00000459918 FAM135AQ9P2D6 1515 aa12.69□□□□□ -0.38
HPS4-207ENST00000459918 FBXO31Q5XUX0 539 aaPredicted RBP12.69□□□□□ -0.38
HPS4-207ENST00000459918 ANKLE2Q86XL3 938 aa12.69□□□□□ -0.38
HPS4-207ENST00000459918 RTEL1-TNFRSF6BF6WH68 1400 aa12.69□□□□□ -0.38
HPS4-207ENST00000459918 DHX29Q7Z478 1369 aaKnown RBP12.69□□□□□ -0.38
HPS4-207ENST00000459918 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.69□□□□□ -0.38
HPS4-207ENST00000459918 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
HPS4-207ENST00000459918 MBD5Q9P267 1494 aa12.67□□□□□ -0.38
HPS4-207ENST00000459918 THEMISQ8N1K5 641 aaPredicted RBP12.67□□□□□ -0.38
HPS4-207ENST00000459918 DEPDC5O75140 1603 aa12.66□□□□□ -0.38
HPS4-207ENST00000459918 NLRP1Q9C000 1473 aa12.66□□□□□ -0.38
HPS4-207ENST00000459918 VWDEQ8N2E2 1590 aa12.66□□□□□ -0.38
HPS4-207ENST00000459918 NPHP4O75161 1426 aaPredicted RBP12.66□□□□□ -0.38
HPS4-207ENST00000459918 RNF17Q9BXT8 1623 aaKnown RBP12.66□□□□□ -0.38
HPS4-207ENST00000459918 SYNMO15061 1565 aa12.65□□□□□ -0.38
HPS4-207ENST00000459918 ZC3H13Q5T200 1668 aaKnown RBP12.65□□□□□ -0.38
HPS4-207ENST00000459918 CEP162Q5TB80 1403 aa12.64□□□□□ -0.39
HPS4-207ENST00000459918 MIA2Q96PC5 1412 aa12.62□□□□□ -0.39
HPS4-207ENST00000459918 CFAP65Q6ZU64 1925 aaKnown RBP12.62□□□□□ -0.39
HPS4-207ENST00000459918 NCOA2Q15596 1464 aa12.62□□□□□ -0.39
HPS4-207ENST00000459918 TSPY4P0CV99 314 aa12.62□□□□□ -0.39
HPS4-207ENST00000459918 TSPY10P0CW01 314 aa12.62□□□□□ -0.39
HPS4-207ENST00000459918 CEP152O94986 1710 aa12.62□□□□□ -0.39
HPS4-207ENST00000459918 STRCP1A6NGW2 1772 aa12.61□□□□□ -0.39
HPS4-207ENST00000459918 ARHGEF5Q12774 1597 aa12.6□□□□□ -0.39
HPS4-207ENST00000459918 MED14O60244 1454 aa12.6□□□□□ -0.39
HPS4-207ENST00000459918 RSPH4AQ5TD94 716 aa12.6□□□□□ -0.39
HPS4-207ENST00000459918 EIF2AK4Q9P2K8 1649 aaKnown RBP12.59□□□□□ -0.39
HPS4-207ENST00000459918 UBR1Q8IWV7 1749 aa12.59□□□□□ -0.39
HPS4-207ENST00000459918 ABCC3O15438 1527 aa12.58□□□□□ -0.4
HPS4-207ENST00000459918 ALKQ9UM73 1620 aa12.58□□□□□ -0.4
HPS4-207ENST00000459918 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
HPS4-207ENST00000459918 ERVK-7P63135 1459 aa12.56□□□□□ -0.4
HPS4-207ENST00000459918 SCAF11Q99590 1463 aaKnown RBP12.55□□□□□ -0.4
HPS4-207ENST00000459918 MAST1Q9Y2H9 1570 aa12.55□□□□□ -0.4
HPS4-207ENST00000459918 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
HPS4-207ENST00000459918 EID1Q9Y6B2 187 aa12.52□□□□□ -0.41
HPS4-207ENST00000459918 XIRP1Q702N8 1843 aaKnown RBP12.52□□□□□ -0.41
HPS4-207ENST00000459918 MROH1Q8NDA8 1641 aa12.51□□□□□ -0.41
HPS4-207ENST00000459918 TXNDC2Q86VQ3 553 aa12.51□□□□□ -0.41
HPS4-207ENST00000459918 PIK3C2BO00750 1634 aa12.51□□□□□ -0.41
HPS4-207ENST00000459918 PPP4R3CPQ6ZMV5 832 aa12.5□□□□□ -0.41
HPS4-207ENST00000459918 DUOX2Q9NRD8 1548 aa12.5□□□□□ -0.41
HPS4-207ENST00000459918 CROCC2H7BZ55 1655 aa12.49□□□□□ -0.41
HPS4-207ENST00000459918 LRRC9Q6ZRR7 1453 aa12.49□□□□□ -0.41
HPS4-207ENST00000459918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.416e-6■□□□□ 8.2
HPS4-207ENST00000459918 ROBO1Q9Y6N7 1651 aa12.48□□□□□ -0.41
HPS4-207ENST00000459918 SLIT1O75093 1534 aa12.47□□□□□ -0.41
HPS4-207ENST00000459918 PRDM15P57071 1507 aaPredicted RBP12.47□□□□□ -0.41
HPS4-207ENST00000459918 BCANQ96GW7 911 aa12.47□□□□□ -0.41
HPS4-207ENST00000459918 MYOM3Q5VTT5 1437 aa12.46□□□□□ -0.41
HPS4-207ENST00000459918 KANK1Q14678 1352 aa12.46□□□□□ -0.41
HPS4-207ENST00000459918 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.42
HPS4-207ENST00000459918 KIF15Q9NS87 1388 aa12.45□□□□□ -0.42
HPS4-207ENST00000459918 LTKP29376 864 aa12.45□□□□□ -0.42
HPS4-207ENST00000459918 EFCAB6Q5THR3 1501 aa12.45□□□□□ -0.42
HPS4-207ENST00000459918 SETD1AO15047 1707 aaKnown RBP12.45□□□□□ -0.42
HPS4-207ENST00000459918 VPS8Q8N3P4 1428 aa12.45□□□□□ -0.42
HPS4-207ENST00000459918 PHLPP1O60346 1717 aa12.44□□□□□ -0.42
HPS4-207ENST00000459918 ERBINQ96RT1 1412 aa12.44□□□□□ -0.42
HPS4-207ENST00000459918 KDM5AP29375 1690 aaKnown RBP12.43□□□□□ -0.42
HPS4-207ENST00000459918 RRP7BPQ9NSQ0 103 aa12.43□□□□□ -0.42
HPS4-207ENST00000459918 TMEM94Q12767 1356 aa12.43□□□□□ -0.42
HPS4-207ENST00000459918 TMEM2Q9UHN6 1383 aa12.43□□□□□ -0.42
HPS4-207ENST00000459918 PTPN23Q9H3S7 1636 aa12.42□□□□□ -0.42
HPS4-207ENST00000459918 PROSER2Q86WR7 435 aaPredicted RBP12.42□□□□□ -0.42
HPS4-207ENST00000459918 RGS17Q9UGC6 210 aaPredicted RBP12.42□□□□□ -0.42
HPS4-207ENST00000459918 ARHGAP31Q2M1Z3 1444 aa12.42□□□□□ -0.42
HPS4-207ENST00000459918 FAM135BQ49AJ0 1406 aa12.41□□□□□ -0.42
HPS4-207ENST00000459918 RBM33Q96EV2 1170 aaKnown RBP12.41□□□□□ -0.42
HPS4-207ENST00000459918 SLC26A8Q96RN1 970 aa12.41□□□□□ -0.42
HPS4-207ENST00000459918 MSH6P52701 1360 aa12.4□□□□□ -0.42
HPS4-207ENST00000459918 ADGRB3O60242 1522 aa12.39□□□□□ -0.43
HPS4-207ENST00000459918 MAP3K1Q13233 1512 aa12.39□□□□□ -0.43
HPS4-207ENST00000459918 APLP2Q06481 763 aa12.39□□□□□ -0.43
HPS4-207ENST00000459918 NKTRP30414 1462 aaKnown RBP12.39□□□□□ -0.43
HPS4-207ENST00000459918 PPP1R15AO75807 674 aaPredicted RBP12.38□□□□□ -0.43
HPS4-207ENST00000459918 KCNA6P17658 529 aa12.38□□□□□ -0.43
HPS4-207ENST00000459918 KANK4Q5T7N3 995 aaPredicted RBP12.38□□□□□ -0.43
HPS4-207ENST00000459918 POTEAQ6S8J7 498 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms