RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 FAM135AQ9P2D6 1515 aa30.91■■■□□ 2.54
FAM3A-217ENST00000457212 FER1L4A9Z1Z3 1794 aa30.91■■■□□ 2.54
FAM3A-217ENST00000457212 MADDQ8WXG6 1647 aa30.91■■■□□ 2.54
FAM3A-217ENST00000457212 DEPDC5O75140 1603 aa30.9■■■□□ 2.54
FAM3A-217ENST00000457212 TRIM26Q12899 539 aaPredicted RBP30.88■■■□□ 2.53
FAM3A-217ENST00000457212 ESF1Q9H501 851 aaKnown RBP30.88■■■□□ 2.53
FAM3A-217ENST00000457212 CNTLNQ9NXG0 1405 aa30.87■■■□□ 2.53
FAM3A-217ENST00000457212 MROH1Q8NDA8 1641 aa30.87■■■□□ 2.53
FAM3A-217ENST00000457212 PRDM15P57071 1507 aaPredicted RBP30.86■■■□□ 2.53
FAM3A-217ENST00000457212 RIMS1Q86UR5 1692 aaKnown RBP30.83■■■□□ 2.53
FAM3A-217ENST00000457212 KDM5DQ9BY66 1539 aa30.83■■■□□ 2.53
FAM3A-217ENST00000457212 KANK1Q14678 1352 aa30.82■■■□□ 2.52
FAM3A-217ENST00000457212 UNC13BO14795 1591 aa30.82■■■□□ 2.52
FAM3A-217ENST00000457212 ZC3H13Q5T200 1668 aaKnown RBP30.81■■■□□ 2.52
FAM3A-217ENST00000457212 WASHC2CQ9Y4E1 1318 aa30.8■■■□□ 2.52
FAM3A-217ENST00000457212 MROH2AA6NES4 1674 aa30.8■■■□□ 2.52
FAM3A-217ENST00000457212 CLTCQ00610 1675 aaKnown RBP30.79■■■□□ 2.52
FAM3A-217ENST00000457212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.79■■■□□ 2.52
FAM3A-217ENST00000457212 SETD5Q9C0A6 1442 aa30.79■■■□□ 2.52
FAM3A-217ENST00000457212 PTPRMP28827 1452 aa30.77■■■□□ 2.52
FAM3A-217ENST00000457212 VWDEQ8N2E2 1590 aa30.77■■■□□ 2.52
FAM3A-217ENST00000457212 ABCC3O15438 1527 aa30.77■■■□□ 2.52
FAM3A-217ENST00000457212 ACIN1Q9UKV3 1341 aaKnown RBP30.74■■■□□ 2.51
FAM3A-217ENST00000457212 LMTK2Q8IWU2 1503 aa30.73■■■□□ 2.51
FAM3A-217ENST00000457212 ZMYM3Q14202 1370 aa30.72■■■□□ 2.51
FAM3A-217ENST00000457212 CEP152O94986 1710 aa30.71■■■□□ 2.51
FAM3A-217ENST00000457212 NUP155O75694 1391 aa30.7■■■□□ 2.51
FAM3A-217ENST00000457212 C3P01024 1663 aa30.69■■■□□ 2.5
FAM3A-217ENST00000457212 IQGAP3Q86VI3 1631 aa30.69■■■□□ 2.5
FAM3A-217ENST00000457212 CAMSAP1Q5T5Y3 1602 aa30.67■■■□□ 2.5
FAM3A-217ENST00000457212 RAB3GAP2Q9H2M9 1393 aa30.66■■■□□ 2.5
FAM3A-217ENST00000457212 HRCP23327 699 aa30.65■■■□□ 2.5
FAM3A-217ENST00000457212 ARHGAP31Q2M1Z3 1444 aa30.64■■■□□ 2.49
FAM3A-217ENST00000457212 TET3O43151 1660 aa30.63■■■□□ 2.49
FAM3A-217ENST00000457212 TRIM52Q96A61 297 aa30.63■■■□□ 2.49
FAM3A-217ENST00000457212 PZPP20742 1482 aa30.63■■■□□ 2.49
FAM3A-217ENST00000457212 CEBPAP49715 358 aaPredicted RBP30.62■■■□□ 2.49
FAM3A-217ENST00000457212 EFCAB6Q5THR3 1501 aa30.6■■■□□ 2.49
FAM3A-217ENST00000457212 NPATQ14207 1427 aa30.59■■■□□ 2.49
FAM3A-217ENST00000457212 PLPPR3Q6T4P5 718 aa30.58■■■□□ 2.49
FAM3A-217ENST00000457212 RPRD2Q5VT52 1461 aaKnown RBP30.56■■■□□ 2.48
FAM3A-217ENST00000457212 AEBP2Q6ZN18 517 aaPredicted RBP30.54■■■□□ 2.48
FAM3A-217ENST00000457212 SETD1BQ9UPS6 1966 aaKnown RBP30.52■■■□□ 2.48
FAM3A-217ENST00000457212 SPATA31D1Q6ZQQ2 1576 aa30.5■■■□□ 2.47
FAM3A-217ENST00000457212 FBXO31Q5XUX0 539 aaPredicted RBP30.5■■■□□ 2.47
FAM3A-217ENST00000457212 SLC4A1APQ9BWU0 796 aaKnown RBP30.5■■■□□ 2.47
FAM3A-217ENST00000457212 ERVK-7P63135 1459 aa30.5■■■□□ 2.47
FAM3A-217ENST00000457212 E9PCH4 1651 aa30.49■■■□□ 2.47
FAM3A-217ENST00000457212 PREX1Q8TCU6 1659 aa30.49■■■□□ 2.47
FAM3A-217ENST00000457212 TNRQ92752 1358 aa30.46■■■□□ 2.47
FAM3A-217ENST00000457212 CFAP65Q6ZU64 1925 aaKnown RBP30.45■■■□□ 2.47
FAM3A-217ENST00000457212 MPHOSPH9Q99550 1183 aa30.45■■■□□ 2.47
FAM3A-217ENST00000457212 PCGF6Q9BYE7 350 aa30.45■■■□□ 2.47
FAM3A-217ENST00000457212 NOS1P29475 1434 aa30.44■■■□□ 2.46
FAM3A-217ENST00000457212 PKD2Q13563 968 aa30.42■■■□□ 2.46
FAM3A-217ENST00000457212 UHRF1BP1Q6BDS2 1440 aa30.39■■■□□ 2.46
FAM3A-217ENST00000457212 MYO3AQ8NEV4 1616 aa30.39■■■□□ 2.46
FAM3A-217ENST00000457212 NLRP1Q9C000 1473 aa30.38■■■□□ 2.45
FAM3A-217ENST00000457212 PTPRTO14522 1441 aa30.36■■■□□ 2.45
FAM3A-217ENST00000457212 SYNMO15061 1565 aa30.36■■■□□ 2.45
FAM3A-217ENST00000457212 SPHKAPQ2M3C7 1700 aa30.35■■■□□ 2.45
FAM3A-217ENST00000457212 SLC52A1Q9NWF4 448 aa30.33■■■□□ 2.45
FAM3A-217ENST00000457212 ZNF142P52746 1687 aaPredicted RBP30.33■■■□□ 2.45
FAM3A-217ENST00000457212 A2ML1A8K2U0 1454 aa30.31■■■□□ 2.44
FAM3A-217ENST00000457212 CEP170BQ9Y4F5 1589 aaPredicted RBP30.31■■■□□ 2.44
FAM3A-217ENST00000457212 LMTK3Q96Q04 1460 aa30.31■■■□□ 2.44
FAM3A-217ENST00000457212 TRPM2O94759 1503 aa30.29■■■□□ 2.44
FAM3A-217ENST00000457212 PIK3C2BO00750 1634 aa30.27■■■□□ 2.44
FAM3A-217ENST00000457212 PLA2R1Q13018 1463 aa30.26■■■□□ 2.44
FAM3A-217ENST00000457212 IDI1Q13907 227 aa30.26■■■□□ 2.43
FAM3A-217ENST00000457212 FOXD1Q16676 465 aa30.26■■■□□ 2.43
FAM3A-217ENST00000457212 UGGT1Q9NYU2 1555 aa30.22■■■□□ 2.43
FAM3A-217ENST00000457212 KDM5AP29375 1690 aaKnown RBP30.22■■■□□ 2.43
FAM3A-217ENST00000457212 UBR1Q8IWV7 1749 aa30.19■■■□□ 2.42
FAM3A-217ENST00000457212 THEMISQ8N1K5 641 aaPredicted RBP30.18■■■□□ 2.42
FAM3A-217ENST00000457212 CLTCL1P53675 1640 aa30.18■■■□□ 2.42
FAM3A-217ENST00000457212 ADGRB3O60242 1522 aa30.17■■■□□ 2.42
FAM3A-217ENST00000457212 STAG3Q9UJ98 1225 aa30.17■■■□□ 2.42
FAM3A-217ENST00000457212 ANKRD30BQ9BXX2 1392 aa30.16■■■□□ 2.42
FAM3A-217ENST00000457212 CCDC144AA2RUR9 1427 aa30.16■■■□□ 2.42
FAM3A-217ENST00000457212 DHX57Q6P158 1386 aaKnown RBP30.15■■■□□ 2.42
FAM3A-217ENST00000457212 HSPA2P54652 639 aa30.13■■■□□ 2.41
FAM3A-217ENST00000457212 TMEM131LA2VDJ0 1609 aa30.13■■■□□ 2.41
FAM3A-217ENST00000457212 KIF1BO60333 1816 aa30.11■■■□□ 2.41
FAM3A-217ENST00000457212 CHGAP10645 457 aaKnown RBP30.09■■■□□ 2.41
FAM3A-217ENST00000457212 SLIT1O75093 1534 aa30.06■■■□□ 2.4
FAM3A-217ENST00000457212 MYO5BQ9ULV0 1848 aa30.06■■■□□ 2.4
FAM3A-217ENST00000457212 ARHGAP23Q9P227 1491 aa30.05■■■□□ 2.4
FAM3A-217ENST00000457212 TMEM2Q9UHN6 1383 aa30.04■■■□□ 2.4
FAM3A-217ENST00000457212 NEURL4Q96JN8 1562 aa30.03■■■□□ 2.4
FAM3A-217ENST00000457212 ANKLE2Q86XL3 938 aa30.01■■■□□ 2.39
FAM3A-217ENST00000457212 HDGFP51858 240 aaKnown RBP29.99■■■□□ 2.39
FAM3A-217ENST00000457212 SPATA31E1Q6ZUB1 1445 aa29.98■■■□□ 2.39
FAM3A-217ENST00000457212 EID1Q9Y6B2 187 aa29.98■■■□□ 2.39
FAM3A-217ENST00000457212 STRCQ7RTU9 1775 aa29.98■■■□□ 2.39
FAM3A-217ENST00000457212 POLR1AO95602 1720 aaPredicted RBP29.97■■■□□ 2.39
FAM3A-217ENST00000457212 ZNF326Q5BKZ1 582 aaKnown RBP29.97■■■□□ 2.39
FAM3A-217ENST00000457212 ZFYVE9O95405 1425 aa29.96■■■□□ 2.39
FAM3A-217ENST00000457212 RIMS2Q9UQ26 1411 aa29.96■■■□□ 2.39
FAM3A-217ENST00000457212 SCAF11Q99590 1463 aaKnown RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms