RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 PIP4K2BP78356 416 aa21.65■■□□□ 1.06
EPCAM-204ENST00000456133 FBXO31Q5XUX0 539 aaPredicted RBP21.65■■□□□ 1.06
EPCAM-204ENST00000456133 DHX29Q7Z478 1369 aaKnown RBP21.65■■□□□ 1.06
EPCAM-204ENST00000456133 TNRQ92752 1358 aa21.65■■□□□ 1.06
EPCAM-204ENST00000456133 MED1Q15648 1581 aaPredicted RBP21.64■■□□□ 1.06
EPCAM-204ENST00000456133 CPS1P31327 1500 aa21.64■■□□□ 1.05
EPCAM-204ENST00000456133 SHANK2Q9UPX8 1470 aa21.63■■□□□ 1.05
EPCAM-204ENST00000456133 EHBP1L1Q8N3D4 1523 aa21.63■■□□□ 1.05
EPCAM-204ENST00000456133 KIF3BO15066 747 aa21.61■■□□□ 1.05
EPCAM-204ENST00000456133 TOM1O60784 492 aa21.61■■□□□ 1.05
EPCAM-204ENST00000456133 PZPP20742 1482 aa21.61■■□□□ 1.05
EPCAM-204ENST00000456133 KDM5DQ9BY66 1539 aa21.61■■□□□ 1.05
EPCAM-204ENST00000456133 VWDEQ8N2E2 1590 aa21.58■■□□□ 1.04
EPCAM-204ENST00000456133 FAM135AQ9P2D6 1515 aa21.57■■□□□ 1.04
EPCAM-204ENST00000456133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.57■■□□□ 1.04
EPCAM-204ENST00000456133 CEP162Q5TB80 1403 aa21.57■■□□□ 1.04
EPCAM-204ENST00000456133 CCDC141Q6ZP82 1450 aa21.57■■□□□ 1.04
EPCAM-204ENST00000456133 ANKLE2Q86XL3 938 aa21.56■■□□□ 1.04
EPCAM-204ENST00000456133 WASHC2CQ9Y4E1 1318 aa21.55■■□□□ 1.04
EPCAM-204ENST00000456133 DEPDC5O75140 1603 aa21.54■■□□□ 1.04
EPCAM-204ENST00000456133 CAMSAP2Q08AD1 1489 aa21.54■■□□□ 1.04
EPCAM-204ENST00000456133 ALKQ9UM73 1620 aa21.53■■□□□ 1.04
EPCAM-204ENST00000456133 UGGT1Q9NYU2 1555 aa21.53■■□□□ 1.04
EPCAM-204ENST00000456133 MIA2Q96PC5 1412 aa21.53■■□□□ 1.04
EPCAM-204ENST00000456133 THEMISQ8N1K5 641 aaPredicted RBP21.53■■□□□ 1.04
EPCAM-204ENST00000456133 NLRP1Q9C000 1473 aa21.52■■□□□ 1.04
EPCAM-204ENST00000456133 NPHP4O75161 1426 aaPredicted RBP21.52■■□□□ 1.04
EPCAM-204ENST00000456133 STRCP1A6NGW2 1772 aa21.52■■□□□ 1.04
EPCAM-204ENST00000456133 IQGAP1P46940 1657 aa21.52■■□□□ 1.04
EPCAM-204ENST00000456133 MED14O60244 1454 aa21.51■■□□□ 1.03
EPCAM-204ENST00000456133 CFAP65Q6ZU64 1925 aaKnown RBP21.5■■□□□ 1.03
EPCAM-204ENST00000456133 NCOA2Q15596 1464 aa21.49■■□□□ 1.03
EPCAM-204ENST00000456133 RSPH4AQ5TD94 716 aa21.48■■□□□ 1.03
EPCAM-204ENST00000456133 ARHGEF5Q12774 1597 aa21.47■■□□□ 1.03
EPCAM-204ENST00000456133 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
EPCAM-204ENST00000456133 RNF17Q9BXT8 1623 aaKnown RBP21.45■■□□□ 1.02
EPCAM-204ENST00000456133 ZC3H13Q5T200 1668 aaKnown RBP21.44■■□□□ 1.02
EPCAM-204ENST00000456133 SENP3Q9H4L4 574 aaPredicted RBP21.44■■□□□ 1.02
EPCAM-204ENST00000456133 ABCC3O15438 1527 aa21.42■■□□□ 1.02
EPCAM-204ENST00000456133 LRRC7Q96NW7 1537 aa21.42■■□□□ 1.02
EPCAM-204ENST00000456133 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
EPCAM-204ENST00000456133 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
EPCAM-204ENST00000456133 SYNMO15061 1565 aa21.41■■□□□ 1.02
EPCAM-204ENST00000456133 CEP152O94986 1710 aa21.41■■□□□ 1.02
EPCAM-204ENST00000456133 UBR1Q8IWV7 1749 aa21.39■■□□□ 1.02
EPCAM-204ENST00000456133 ERVK-7P63135 1459 aa21.38■■□□□ 1.01
EPCAM-204ENST00000456133 MAST1Q9Y2H9 1570 aa21.38■■□□□ 1.01
EPCAM-204ENST00000456133 EIF2AK4Q9P2K8 1649 aaKnown RBP21.38■■□□□ 1.01
EPCAM-204ENST00000456133 MROH1Q8NDA8 1641 aa21.37■■□□□ 1.01
EPCAM-204ENST00000456133 XIRP1Q702N8 1843 aaKnown RBP21.36■■□□□ 1.01
EPCAM-204ENST00000456133 SCAF11Q99590 1463 aaKnown RBP21.31■■□□□ 1
EPCAM-204ENST00000456133 LRRC9Q6ZRR7 1453 aa21.28■■□□□ 1
EPCAM-204ENST00000456133 LTKP29376 864 aa21.28■■□□□ 1
EPCAM-204ENST00000456133 SLIT1O75093 1534 aa21.27■■□□□ 1
EPCAM-204ENST00000456133 TXNDC2Q86VQ3 553 aa21.27■■□□□ 1
EPCAM-204ENST00000456133 ARHGAP23Q9P227 1491 aa21.27■■□□□ 1
EPCAM-204ENST00000456133 DUOX2Q9NRD8 1548 aa21.26■□□□□ 0.99
EPCAM-204ENST00000456133 RGS17Q9UGC6 210 aaPredicted RBP21.25■□□□□ 0.99
EPCAM-204ENST00000456133 PIK3C2BO00750 1634 aa21.23■□□□□ 0.99
EPCAM-204ENST00000456133 PRDM15P57071 1507 aaPredicted RBP21.21■□□□□ 0.99
EPCAM-204ENST00000456133 ARHGAP31Q2M1Z3 1444 aa21.21■□□□□ 0.99
EPCAM-204ENST00000456133 EID1Q9Y6B2 187 aa21.2■□□□□ 0.98
EPCAM-204ENST00000456133 MYOM3Q5VTT5 1437 aa21.2■□□□□ 0.98
EPCAM-204ENST00000456133 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
EPCAM-204ENST00000456133 CROCC2H7BZ55 1655 aa21.19■□□□□ 0.98
EPCAM-204ENST00000456133 KANK4Q5T7N3 995 aaPredicted RBP21.19■□□□□ 0.98
EPCAM-204ENST00000456133 FAM135BQ49AJ0 1406 aa21.17■□□□□ 0.98
EPCAM-204ENST00000456133 KIF15Q9NS87 1388 aa21.16■□□□□ 0.98
EPCAM-204ENST00000456133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.16■□□□□ 0.98
EPCAM-204ENST00000456133 TMEM2Q9UHN6 1383 aa21.16■□□□□ 0.98
EPCAM-204ENST00000456133 KDM5AP29375 1690 aaKnown RBP21.15■□□□□ 0.98
EPCAM-204ENST00000456133 ROBO1Q9Y6N7 1651 aa21.15■□□□□ 0.98
EPCAM-204ENST00000456133 RRP7BPQ9NSQ0 103 aa21.14■□□□□ 0.98
EPCAM-204ENST00000456133 TMEM94Q12767 1356 aa21.14■□□□□ 0.97
EPCAM-204ENST00000456133 ERBINQ96RT1 1412 aa21.14■□□□□ 0.97
EPCAM-204ENST00000456133 MAP3K1Q13233 1512 aa21.14■□□□□ 0.97
EPCAM-204ENST00000456133 STAG3Q9UJ98 1225 aa21.14■□□□□ 0.97
EPCAM-204ENST00000456133 EFCAB6Q5THR3 1501 aa21.12■□□□□ 0.97
EPCAM-204ENST00000456133 POTEAQ6S8J7 498 aa21.12■□□□□ 0.97
EPCAM-204ENST00000456133 ABCC5O15440 1437 aa21.12■□□□□ 0.97
EPCAM-204ENST00000456133 TET3O43151 1660 aa21.1■□□□□ 0.97
EPCAM-204ENST00000456133 PTPN23Q9H3S7 1636 aa21.1■□□□□ 0.97
EPCAM-204ENST00000456133 KANK1Q14678 1352 aa21.09■□□□□ 0.97
EPCAM-204ENST00000456133 KCNA6P17658 529 aa21.09■□□□□ 0.97
EPCAM-204ENST00000456133 PROSER2Q86WR7 435 aaPredicted RBP21.09■□□□□ 0.97
EPCAM-204ENST00000456133 RBM33Q96EV2 1170 aaKnown RBP21.09■□□□□ 0.97
EPCAM-204ENST00000456133 IDI1Q13907 227 aa21.09■□□□□ 0.97
EPCAM-204ENST00000456133 SLC26A8Q96RN1 970 aa21.09■□□□□ 0.97
EPCAM-204ENST00000456133 LMTK2Q8IWU2 1503 aa21.05■□□□□ 0.96
EPCAM-204ENST00000456133 SETD1AO15047 1707 aaKnown RBP21.05■□□□□ 0.96
EPCAM-204ENST00000456133 PHLPP1O60346 1717 aa21.05■□□□□ 0.96
EPCAM-204ENST00000456133 DAPK1P53355 1430 aa21.05■□□□□ 0.96
EPCAM-204ENST00000456133 NWD1Q149M9 1564 aa21.05■□□□□ 0.96
EPCAM-204ENST00000456133 MYO5BQ9ULV0 1848 aa21.05■□□□□ 0.96
EPCAM-204ENST00000456133 LOC105371045A0A1W2PR82 267 aa21.04■□□□□ 0.96
EPCAM-204ENST00000456133 ADGRB3O60242 1522 aa21.04■□□□□ 0.96
EPCAM-204ENST00000456133 NKTRP30414 1462 aaKnown RBP21.03■□□□□ 0.96
EPCAM-204ENST00000456133 CHD2O14647 1828 aaKnown RBP21.02■□□□□ 0.95
EPCAM-204ENST00000456133 NOS1P29475 1434 aa21.01■□□□□ 0.95
EPCAM-204ENST00000456133 CHIC2Q9UKJ5 165 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms