RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 ESF1Q9H501 851 aaKnown RBP22.36■■□□□ 1.17
CLCN1-203ENST00000455478 CNTLNQ9NXG0 1405 aa22.34■■□□□ 1.17
CLCN1-203ENST00000455478 RNF17Q9BXT8 1623 aaKnown RBP22.34■■□□□ 1.17
CLCN1-203ENST00000455478 CEBPAP49715 358 aaPredicted RBP22.33■■□□□ 1.17
CLCN1-203ENST00000455478 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
CLCN1-203ENST00000455478 CLTCQ00610 1675 aaKnown RBP22.31■■□□□ 1.16
CLCN1-203ENST00000455478 MROH1Q8NDA8 1641 aa22.31■■□□□ 1.16
CLCN1-203ENST00000455478 ANKRD50Q9ULJ7 1429 aa22.31■■□□□ 1.16
CLCN1-203ENST00000455478 ZMYM3Q14202 1370 aa22.29■■□□□ 1.16
CLCN1-203ENST00000455478 MROH2AA6NES4 1674 aa22.29■■□□□ 1.16
CLCN1-203ENST00000455478 C3P01024 1663 aa22.29■■□□□ 1.16
CLCN1-203ENST00000455478 WASHC2CQ9Y4E1 1318 aa22.29■■□□□ 1.16
CLCN1-203ENST00000455478 FAM135AQ9P2D6 1515 aa22.26■■□□□ 1.15
CLCN1-203ENST00000455478 DEPDC5O75140 1603 aa22.26■■□□□ 1.15
CLCN1-203ENST00000455478 KDM5DQ9BY66 1539 aa22.26■■□□□ 1.15
CLCN1-203ENST00000455478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.24■■□□□ 1.15
CLCN1-203ENST00000455478 PRDM15P57071 1507 aaPredicted RBP22.24■■□□□ 1.15
CLCN1-203ENST00000455478 ABCC3O15438 1527 aa22.23■■□□□ 1.15
CLCN1-203ENST00000455478 NAIPQ13075 1403 aa22.22■■□□□ 1.15
CLCN1-203ENST00000455478 SETD1BQ9UPS6 1966 aaKnown RBP22.21■■□□□ 1.15
CLCN1-203ENST00000455478 VWDEQ8N2E2 1590 aa22.2■■□□□ 1.14
CLCN1-203ENST00000455478 ZC3H13Q5T200 1668 aaKnown RBP22.2■■□□□ 1.14
CLCN1-203ENST00000455478 CEP152O94986 1710 aa22.2■■□□□ 1.14
CLCN1-203ENST00000455478 HFM1A2PYH4 1435 aa22.18■■□□□ 1.14
CLCN1-203ENST00000455478 KANK1Q14678 1352 aa22.18■■□□□ 1.14
CLCN1-203ENST00000455478 ILDR1Q86SU0 546 aaPredicted RBP22.18■■□□□ 1.14
CLCN1-203ENST00000455478 NPATQ14207 1427 aa22.17■■□□□ 1.14
CLCN1-203ENST00000455478 FBXO31Q5XUX0 539 aaPredicted RBP22.16■■□□□ 1.14
CLCN1-203ENST00000455478 GCC2Q8IWJ2 1684 aa22.16■■□□□ 1.14
CLCN1-203ENST00000455478 UNC13BO14795 1591 aa22.16■■□□□ 1.14
CLCN1-203ENST00000455478 PZPP20742 1482 aa22.15■■□□□ 1.14
CLCN1-203ENST00000455478 CAMSAP1Q5T5Y3 1602 aa22.14■■□□□ 1.14
CLCN1-203ENST00000455478 LMTK2Q8IWU2 1503 aa22.14■■□□□ 1.13
CLCN1-203ENST00000455478 LMTK3Q96Q04 1460 aa22.12■■□□□ 1.13
CLCN1-203ENST00000455478 ARHGAP31Q2M1Z3 1444 aa22.12■■□□□ 1.13
CLCN1-203ENST00000455478 PREX1Q8TCU6 1659 aa22.11■■□□□ 1.13
CLCN1-203ENST00000455478 CFAP65Q6ZU64 1925 aaKnown RBP22.1■■□□□ 1.13
CLCN1-203ENST00000455478 NUP155O75694 1391 aa22.1■■□□□ 1.13
CLCN1-203ENST00000455478 UHRF1BP1Q6BDS2 1440 aa22.07■■□□□ 1.12
CLCN1-203ENST00000455478 IQGAP3Q86VI3 1631 aa22.06■■□□□ 1.12
CLCN1-203ENST00000455478 TNRQ92752 1358 aa22.06■■□□□ 1.12
CLCN1-203ENST00000455478 EFCAB6Q5THR3 1501 aa22.06■■□□□ 1.12
CLCN1-203ENST00000455478 SPATA31D1Q6ZQQ2 1576 aa22.05■■□□□ 1.12
CLCN1-203ENST00000455478 ERVK-7P63135 1459 aa22.05■■□□□ 1.12
CLCN1-203ENST00000455478 TET3O43151 1660 aa22.04■■□□□ 1.12
CLCN1-203ENST00000455478 HSPA2P54652 639 aa22.04■■□□□ 1.12
CLCN1-203ENST00000455478 SETD5Q9C0A6 1442 aa22.03■■□□□ 1.12
CLCN1-203ENST00000455478 MYO3AQ8NEV4 1616 aa22.02■■□□□ 1.12
CLCN1-203ENST00000455478 TRIM52Q96A61 297 aa22■■□□□ 1.11
CLCN1-203ENST00000455478 RPRD2Q5VT52 1461 aaKnown RBP21.99■■□□□ 1.11
CLCN1-203ENST00000455478 NOS1P29475 1434 aa21.98■■□□□ 1.11
CLCN1-203ENST00000455478 E9PCH4 1651 aa21.98■■□□□ 1.11
CLCN1-203ENST00000455478 A2ML1A8K2U0 1454 aa21.98■■□□□ 1.11
CLCN1-203ENST00000455478 CEP170BQ9Y4F5 1589 aaPredicted RBP21.98■■□□□ 1.11
CLCN1-203ENST00000455478 ZNF142P52746 1687 aaPredicted RBP21.98■■□□□ 1.11
CLCN1-203ENST00000455478 NLRP1Q9C000 1473 aa21.97■■□□□ 1.11
CLCN1-203ENST00000455478 RAB3GAP2Q9H2M9 1393 aa21.95■■□□□ 1.1
CLCN1-203ENST00000455478 SYNMO15061 1565 aa21.95■■□□□ 1.1
CLCN1-203ENST00000455478 IDI1Q13907 227 aa21.92■■□□□ 1.1
CLCN1-203ENST00000455478 ACIN1Q9UKV3 1341 aaKnown RBP21.91■■□□□ 1.1
CLCN1-203ENST00000455478 SLC4A1APQ9BWU0 796 aaKnown RBP21.91■■□□□ 1.1
CLCN1-203ENST00000455478 PKD2Q13563 968 aa21.9■■□□□ 1.1
CLCN1-203ENST00000455478 HRCP23327 699 aa21.89■■□□□ 1.09
CLCN1-203ENST00000455478 SLC52A1Q9NWF4 448 aa21.89■■□□□ 1.09
CLCN1-203ENST00000455478 UGGT1Q9NYU2 1555 aa21.89■■□□□ 1.09
CLCN1-203ENST00000455478 STRCQ7RTU9 1775 aa21.89■■□□□ 1.09
CLCN1-203ENST00000455478 TRIM26Q12899 539 aaPredicted RBP21.88■■□□□ 1.09
CLCN1-203ENST00000455478 THEMISQ8N1K5 641 aaPredicted RBP21.88■■□□□ 1.09
CLCN1-203ENST00000455478 MPHOSPH9Q99550 1183 aa21.88■■□□□ 1.09
CLCN1-203ENST00000455478 PTPRTO14522 1441 aa21.87■■□□□ 1.09
CLCN1-203ENST00000455478 PIK3C2BO00750 1634 aa21.87■■□□□ 1.09
CLCN1-203ENST00000455478 UBR1Q8IWV7 1749 aa21.86■■□□□ 1.09
CLCN1-203ENST00000455478 PLA2R1Q13018 1463 aa21.84■■□□□ 1.09
CLCN1-203ENST00000455478 SPHKAPQ2M3C7 1700 aa21.83■■□□□ 1.09
CLCN1-203ENST00000455478 NCKAP5LQ9HCH0 1330 aa21.83■■□□□ 1.09
CLCN1-203ENST00000455478 FOXD1Q16676 465 aa21.82■■□□□ 1.08
CLCN1-203ENST00000455478 KDM5AP29375 1690 aaKnown RBP21.8■■□□□ 1.08
CLCN1-203ENST00000455478 STAG3Q9UJ98 1225 aa21.8■■□□□ 1.08
CLCN1-203ENST00000455478 ANKLE2Q86XL3 938 aa21.78■■□□□ 1.08
CLCN1-203ENST00000455478 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
CLCN1-203ENST00000455478 ADGRB3O60242 1522 aa21.78■■□□□ 1.08
CLCN1-203ENST00000455478 TRPM2O94759 1503 aa21.77■■□□□ 1.08
CLCN1-203ENST00000455478 ARHGAP23Q9P227 1491 aa21.77■■□□□ 1.07
CLCN1-203ENST00000455478 TMEM131LA2VDJ0 1609 aa21.77■■□□□ 1.07
CLCN1-203ENST00000455478 MYO5BQ9ULV0 1848 aa21.76■■□□□ 1.07
CLCN1-203ENST00000455478 SLIT1O75093 1534 aa21.75■■□□□ 1.07
CLCN1-203ENST00000455478 TMEM2Q9UHN6 1383 aa21.75■■□□□ 1.07
CLCN1-203ENST00000455478 CLTCL1P53675 1640 aa21.75■■□□□ 1.07
CLCN1-203ENST00000455478 CHGAP10645 457 aaKnown RBP21.74■■□□□ 1.07
CLCN1-203ENST00000455478 LTKP29376 864 aa21.74■■□□□ 1.07
CLCN1-203ENST00000455478 POLR1AO95602 1720 aaPredicted RBP21.74■■□□□ 1.07
CLCN1-203ENST00000455478 NEURL4Q96JN8 1562 aa21.73■■□□□ 1.07
CLCN1-203ENST00000455478 TXNDC2Q86VQ3 553 aa21.72■■□□□ 1.07
CLCN1-203ENST00000455478 MED14O60244 1454 aa21.71■■□□□ 1.07
CLCN1-203ENST00000455478 EID1Q9Y6B2 187 aa21.69■■□□□ 1.06
CLCN1-203ENST00000455478 SCAF11Q99590 1463 aaKnown RBP21.69■■□□□ 1.06
CLCN1-203ENST00000455478 NPHP4O75161 1426 aaPredicted RBP21.68■■□□□ 1.06
CLCN1-203ENST00000455478 ZFYVE9O95405 1425 aa21.68■■□□□ 1.06
CLCN1-203ENST00000455478 KIF1BO60333 1816 aa21.66■■□□□ 1.06
CLCN1-203ENST00000455478 RIMS2Q9UQ26 1411 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms