RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 RSPH4AQ5TD94 716 aa12.85□□□□□ -0.35
NIF3L1-209ENST00000454952 GGT6Q6P531 493 aa12.85□□□□□ -0.35
NIF3L1-209ENST00000454952 PTPRKQ15262 1439 aa12.85□□□□□ -0.35
NIF3L1-209ENST00000454952 CEP170BQ9Y4F5 1589 aaPredicted RBP12.85□□□□□ -0.35
NIF3L1-209ENST00000454952 MBD5Q9P267 1494 aa12.84□□□□□ -0.35
NIF3L1-209ENST00000454952 DHX29Q7Z478 1369 aaKnown RBP12.82□□□□□ -0.36
NIF3L1-209ENST00000454952 CCDC141Q6ZP82 1450 aa12.82□□□□□ -0.36
NIF3L1-209ENST00000454952 DISP3Q9P2K9 1392 aa12.81□□□□□ -0.36
NIF3L1-209ENST00000454952 ZNF644Q9H582 1327 aaPredicted RBP12.81□□□□□ -0.36
NIF3L1-209ENST00000454952 A2ML1A8K2U0 1454 aa12.8□□□□□ -0.36
NIF3L1-209ENST00000454952 TCOF1Q13428 1488 aaKnown RBP12.8□□□□□ -0.36
NIF3L1-209ENST00000454952 NCKAP5LQ9HCH0 1330 aa12.8□□□□□ -0.36
NIF3L1-209ENST00000454952 CAMSAP2Q08AD1 1489 aa12.78□□□□□ -0.36
NIF3L1-209ENST00000454952 NCOA2Q15596 1464 aa12.78□□□□□ -0.36
NIF3L1-209ENST00000454952 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
NIF3L1-209ENST00000454952 ARHGEF5Q12774 1597 aa12.77□□□□□ -0.36
NIF3L1-209ENST00000454952 SPATA31D1Q6ZQQ2 1576 aa12.77□□□□□ -0.36
NIF3L1-209ENST00000454952 KIF3BO15066 747 aa12.77□□□□□ -0.37
NIF3L1-209ENST00000454952 TNRQ92752 1358 aa12.77□□□□□ -0.37
NIF3L1-209ENST00000454952 PZPP20742 1482 aa12.77□□□□□ -0.37
NIF3L1-209ENST00000454952 DNMT1P26358 1616 aaKnown RBP12.77□□□□□ -0.37
NIF3L1-209ENST00000454952 POLR1AO95602 1720 aaPredicted RBP12.76□□□□□ -0.37
NIF3L1-209ENST00000454952 TSPY4P0CV99 314 aa12.76□□□□□ -0.37
NIF3L1-209ENST00000454952 TSPY10P0CW01 314 aa12.76□□□□□ -0.37
NIF3L1-209ENST00000454952 ZNF335Q9H4Z2 1342 aaPredicted RBP12.76□□□□□ -0.37
NIF3L1-209ENST00000454952 WASHC2CQ9Y4E1 1318 aa12.76□□□□□ -0.37
NIF3L1-209ENST00000454952 UBAP1LF5GYI3 381 aa12.75□□□□□ -0.37
NIF3L1-209ENST00000454952 NLRP1Q9C000 1473 aa12.73□□□□□ -0.37
NIF3L1-209ENST00000454952 CPS1P31327 1500 aa12.72□□□□□ -0.37
NIF3L1-209ENST00000454952 SOCS7O14512 581 aa12.72□□□□□ -0.37
NIF3L1-209ENST00000454952 THEMISQ8N1K5 641 aaPredicted RBP12.72□□□□□ -0.37
NIF3L1-209ENST00000454952 ZC3H13Q5T200 1668 aaKnown RBP12.72□□□□□ -0.37
NIF3L1-209ENST00000454952 VPS8Q8N3P4 1428 aa12.71□□□□□ -0.37
NIF3L1-209ENST00000454952 RNF17Q9BXT8 1623 aaKnown RBP12.71□□□□□ -0.37
NIF3L1-209ENST00000454952 ANKLE2Q86XL3 938 aa12.71□□□□□ -0.37
NIF3L1-209ENST00000454952 MAST1Q9Y2H9 1570 aa12.71□□□□□ -0.37
NIF3L1-209ENST00000454952 MAP3K1Q13233 1512 aa12.71□□□□□ -0.38
NIF3L1-209ENST00000454952 LRRC9Q6ZRR7 1453 aa12.71□□□□□ -0.38
NIF3L1-209ENST00000454952 MIA2Q96PC5 1412 aa12.71□□□□□ -0.38
NIF3L1-209ENST00000454952 EIF2AK4Q9P2K8 1649 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-209ENST00000454952 DEPDC5O75140 1603 aa12.7□□□□□ -0.38
NIF3L1-209ENST00000454952 FBXO31Q5XUX0 539 aaPredicted RBP12.69□□□□□ -0.38
NIF3L1-209ENST00000454952 NEURL4Q96JN8 1562 aa12.69□□□□□ -0.38
NIF3L1-209ENST00000454952 UGGT1Q9NYU2 1555 aa12.69□□□□□ -0.38
NIF3L1-209ENST00000454952 SHANK2Q9UPX8 1470 aa12.68□□□□□ -0.38
NIF3L1-209ENST00000454952 TOM1O60784 492 aa12.68□□□□□ -0.38
NIF3L1-209ENST00000454952 ILDR2Q71H61 639 aa12.68□□□□□ -0.38
NIF3L1-209ENST00000454952 MED14O60244 1454 aa12.67□□□□□ -0.38
NIF3L1-209ENST00000454952 ABCC3O15438 1527 aa12.67□□□□□ -0.38
NIF3L1-209ENST00000454952 NPHP4O75161 1426 aaPredicted RBP12.66□□□□□ -0.38
NIF3L1-209ENST00000454952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.66□□□□□ -0.38
NIF3L1-209ENST00000454952 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
NIF3L1-209ENST00000454952 IQGAP1P46940 1657 aa12.64□□□□□ -0.39
NIF3L1-209ENST00000454952 DUOX2Q9NRD8 1548 aa12.64□□□□□ -0.39
NIF3L1-209ENST00000454952 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
NIF3L1-209ENST00000454952 RNF216Q9NWF9 866 aaPredicted RBP12.64□□□□□ -0.39
NIF3L1-209ENST00000454952 ERVK-7P63135 1459 aa12.63□□□□□ -0.39
NIF3L1-209ENST00000454952 VWDEQ8N2E2 1590 aa12.63□□□□□ -0.39
NIF3L1-209ENST00000454952 CFAP65Q6ZU64 1925 aaKnown RBP12.61□□□□□ -0.39
NIF3L1-209ENST00000454952 APLP2Q06481 763 aa12.61□□□□□ -0.39
NIF3L1-209ENST00000454952 CEP152O94986 1710 aa12.61□□□□□ -0.39
NIF3L1-209ENST00000454952 SYNMO15061 1565 aa12.6□□□□□ -0.39
NIF3L1-209ENST00000454952 MROH1Q8NDA8 1641 aa12.6□□□□□ -0.39
NIF3L1-209ENST00000454952 PIP4K2BP78356 416 aa12.6□□□□□ -0.39
NIF3L1-209ENST00000454952 ERBINQ96RT1 1412 aa12.6□□□□□ -0.39
NIF3L1-209ENST00000454952 PRDM15P57071 1507 aaPredicted RBP12.59□□□□□ -0.39
NIF3L1-209ENST00000454952 CROCC2H7BZ55 1655 aa12.59□□□□□ -0.39
NIF3L1-209ENST00000454952 ARHGAP31Q2M1Z3 1444 aa12.59□□□□□ -0.39
NIF3L1-209ENST00000454952 UBR1Q8IWV7 1749 aa12.59□□□□□ -0.39
NIF3L1-209ENST00000454952 KIF15Q9NS87 1388 aa12.58□□□□□ -0.4
NIF3L1-209ENST00000454952 HSPA1LP34931 641 aa12.58□□□□□ -0.4
NIF3L1-209ENST00000454952 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.4
NIF3L1-209ENST00000454952 SCAF11Q99590 1463 aaKnown RBP12.58□□□□□ -0.4
NIF3L1-209ENST00000454952 KANK1Q14678 1352 aa12.57□□□□□ -0.4
NIF3L1-209ENST00000454952 PTPN23Q9H3S7 1636 aa12.57□□□□□ -0.4
NIF3L1-209ENST00000454952 MED1Q15648 1581 aaPredicted RBP12.56□□□□□ -0.4
NIF3L1-209ENST00000454952 LOC105371045A0A1W2PR82 267 aa12.56□□□□□ -0.4
NIF3L1-209ENST00000454952 EID1Q9Y6B2 187 aa12.56□□□□□ -0.4
NIF3L1-209ENST00000454952 SLIT1O75093 1534 aa12.56□□□□□ -0.4
NIF3L1-209ENST00000454952 KDM5AP29375 1690 aaKnown RBP12.54□□□□□ -0.4
NIF3L1-209ENST00000454952 ABCC5O15440 1437 aa12.54□□□□□ -0.4
NIF3L1-209ENST00000454952 ARHGAP23Q9P227 1491 aa12.54□□□□□ -0.4
NIF3L1-209ENST00000454952 LRRC7Q96NW7 1537 aa12.54□□□□□ -0.4
NIF3L1-209ENST00000454952 ANKRD30AQ9BXX3 1397 aa12.54□□□□□ -0.4
NIF3L1-209ENST00000454952 DAPK1P53355 1430 aa12.54□□□□□ -0.4
NIF3L1-209ENST00000454952 STRCP1A6NGW2 1772 aa12.53□□□□□ -0.4
NIF3L1-209ENST00000454952 TXNDC2Q86VQ3 553 aa12.53□□□□□ -0.4
NIF3L1-209ENST00000454952 RRP7BPQ9NSQ0 103 aa12.53□□□□□ -0.4
NIF3L1-209ENST00000454952 ZBTB22O15209 634 aa12.52□□□□□ -0.41
NIF3L1-209ENST00000454952 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
NIF3L1-209ENST00000454952 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
NIF3L1-209ENST00000454952 FGD6Q6ZV73 1430 aa12.52□□□□□ -0.41
NIF3L1-209ENST00000454952 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
NIF3L1-209ENST00000454952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.51□□□□□ -0.41
NIF3L1-209ENST00000454952 LMTK2Q8IWU2 1503 aa12.51□□□□□ -0.41
NIF3L1-209ENST00000454952 PIK3C2BO00750 1634 aa12.51□□□□□ -0.41
NIF3L1-209ENST00000454952 TMEM2Q9UHN6 1383 aa12.5□□□□□ -0.41
NIF3L1-209ENST00000454952 EFCAB6Q5THR3 1501 aa12.49□□□□□ -0.41
NIF3L1-209ENST00000454952 LTKP29376 864 aa12.48□□□□□ -0.41
NIF3L1-209ENST00000454952 SLC52A1Q9NWF4 448 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms