RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 MAP3K4Q9Y6R4 1608 aa8.87□□□□□ -0.99
MSH6-205ENST00000454137 TSPY4P0CV99 314 aa8.87□□□□□ -0.99
MSH6-205ENST00000454137 TSPY10P0CW01 314 aa8.87□□□□□ -0.99
MSH6-205ENST00000454137 PLCD3Q8N3E9 789 aa8.87□□□□□ -0.99
MSH6-205ENST00000454137 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
MSH6-205ENST00000454137 C9orf84Q5VXU9 1444 aa8.87□□□□□ -0.99
MSH6-205ENST00000454137 SYCP2Q9BX26 1530 aa8.86□□□□□ -0.99
MSH6-205ENST00000454137 FANCAO15360 1455 aa8.86□□□□□ -0.99
MSH6-205ENST00000454137 NEO1Q92859 1461 aa8.86□□□□□ -0.99
MSH6-205ENST00000454137 PKD2Q13563 968 aa8.86□□□□□ -0.99
MSH6-205ENST00000454137 CYB5RLQ6IPT4 315 aa8.86□□□□□ -0.99
MSH6-205ENST00000454137 PLEKHG5O94827 1062 aa8.85□□□□□ -0.99
MSH6-205ENST00000454137 PLCB2Q00722 1185 aa8.85□□□□□ -0.99
MSH6-205ENST00000454137 CD109Q6YHK3 1445 aa8.85□□□□□ -0.99
MSH6-205ENST00000454137 ARHGEF12Q9NZN5 1544 aa8.85□□□□□ -0.99
MSH6-205ENST00000454137 CACNB1Q02641 598 aaPredicted RBP8.84□□□□□ -0.99
MSH6-205ENST00000454137 DIP2BQ9P265 1576 aa8.84□□□□□ -0.99
MSH6-205ENST00000454137 ZNF777Q9ULD5 760 aaPredicted RBP8.84□□□□□ -0.99
MSH6-205ENST00000454137 TIMELESSQ9UNS1 1208 aa8.83□□□□□ -1
MSH6-205ENST00000454137 KDM5DQ9BY66 1539 aa8.83□□□□□ -1
MSH6-205ENST00000454137 DUOX2Q9NRD8 1548 aa8.83□□□□□ -1
MSH6-205ENST00000454137 INO80Q9ULG1 1556 aaPredicted RBP8.82□□□□□ -1
MSH6-205ENST00000454137 HNRNPMP52272 730 aaKnown RBP eCLIP8.82□□□□□ -1
MSH6-205ENST00000454137 MIER1Q8N108 512 aa8.82□□□□□ -1
MSH6-205ENST00000454137 ZBTB47Q9UFB7 747 aaPredicted RBP8.82□□□□□ -1
MSH6-205ENST00000454137 ADGRL1O94910 1474 aa8.82□□□□□ -1
MSH6-205ENST00000454137 KDM5CP41229 1560 aa8.82□□□□□ -1
MSH6-205ENST00000454137 ANKRD50Q9ULJ7 1429 aa8.81□□□□□ -1
MSH6-205ENST00000454137 KDM6BO15054 1643 aa8.81□□□□□ -1
MSH6-205ENST00000454137 ZNF518AQ6AHZ1 1483 aa8.81□□□□□ -1
MSH6-205ENST00000454137 ERBINQ96RT1 1412 aa8.8□□□□□ -1
MSH6-205ENST00000454137 ZFYVE16Q7Z3T8 1539 aa8.8□□□□□ -1
MSH6-205ENST00000454137 RRP7BPQ9NSQ0 103 aa8.8□□□□□ -1
MSH6-205ENST00000454137 CHIC2Q9UKJ5 165 aa8.8□□□□□ -1
MSH6-205ENST00000454137 KIF15Q9NS87 1388 aa8.8□□□□□ -1
MSH6-205ENST00000454137 KIF13AQ9H1H9 1805 aa8.8□□□□□ -1
MSH6-205ENST00000454137 EIF2AK4Q9P2K8 1649 aaKnown RBP8.8□□□□□ -1
MSH6-205ENST00000454137 SCAPERQ9BY12 1400 aa8.8□□□□□ -1
MSH6-205ENST00000454137 TRAPPC8Q9Y2L5 1435 aa8.8□□□□□ -1
MSH6-205ENST00000454137 UNC13BO14795 1591 aa8.79□□□□□ -1
MSH6-205ENST00000454137 TEX14Q8IWB6 1497 aa8.79□□□□□ -1
MSH6-205ENST00000454137 MLH3Q9UHC1 1453 aa8.79□□□□□ -1
MSH6-205ENST00000454137 BCORL1Q5H9F3 1711 aa8.79□□□□□ -1
MSH6-205ENST00000454137 ATP7AQ04656 1500 aa8.79□□□□□ -1
MSH6-205ENST00000454137 PPRC1Q5VV67 1664 aaKnown RBP8.78□□□□□ -1
MSH6-205ENST00000454137 MAGI2Q86UL8 1455 aa8.78□□□□□ -1
MSH6-205ENST00000454137 KIDINS220Q9ULH0 1771 aa8.78□□□□□ -1
MSH6-205ENST00000454137 POGZQ7Z3K3 1410 aa8.78□□□□□ -1
MSH6-205ENST00000454137 RICTORQ6R327 1708 aa8.77□□□□□ -1
MSH6-205ENST00000454137 ECM2O94769 699 aaPredicted RBP8.77□□□□□ -1.01
MSH6-205ENST00000454137 SPAG9O60271 1321 aaKnown RBP8.77□□□□□ -1.01
MSH6-205ENST00000454137 DENND4BO75064 1496 aaPredicted RBP8.77□□□□□ -1.01
MSH6-205ENST00000454137 DEPDC5O75140 1603 aa8.76□□□□□ -1.01
MSH6-205ENST00000454137 HECW2Q9P2P5 1572 aa8.76□□□□□ -1.01
MSH6-205ENST00000454137 PZPP20742 1482 aa8.76□□□□□ -1.01
MSH6-205ENST00000454137 IQGAP3Q86VI3 1631 aa8.76□□□□□ -1.01
MSH6-205ENST00000454137 ZMYM4Q5VZL5 1548 aa8.75□□□□□ -1.01
MSH6-205ENST00000454137 DHX29Q7Z478 1369 aaKnown RBP8.74□□□□□ -1.01
MSH6-205ENST00000454137 FAM69CQ0P6D2 419 aa8.74□□□□□ -1.01
MSH6-205ENST00000454137 AFAP1Q8N556 730 aa8.74□□□□□ -1.01
MSH6-205ENST00000454137 MPHOSPH9Q99550 1183 aa8.74□□□□□ -1.01
MSH6-205ENST00000454137 DIEXFQ68CQ4 756 aaKnown RBP8.73□□□□□ -1.01
MSH6-205ENST00000454137 VWDEQ8N2E2 1590 aa8.73□□□□□ -1.01
MSH6-205ENST00000454137 REREQ9P2R6 1566 aa8.73□□□□□ -1.01
MSH6-205ENST00000454137 RNF17Q9BXT8 1623 aaKnown RBP8.72□□□□□ -1.01
MSH6-205ENST00000454137 TRIM52Q96A61 297 aa8.72□□□□□ -1.01
MSH6-205ENST00000454137 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.72□□□□□ -1.01
MSH6-205ENST00000454137 ANKRD30BQ9BXX2 1392 aa8.72□□□□□ -1.01
MSH6-205ENST00000454137 ATP10AO60312 1499 aa8.71□□□□□ -1.01
MSH6-205ENST00000454137 PRDM15P57071 1507 aaPredicted RBP8.71□□□□□ -1.01
MSH6-205ENST00000454137 FAM135AQ9P2D6 1515 aa8.71□□□□□ -1.01
MSH6-205ENST00000454137 FRMPD1Q5SYB0 1578 aa8.71□□□□□ -1.02
MSH6-205ENST00000454137 ZNF316A6NFI3 1004 aaPredicted RBP8.71□□□□□ -1.02
MSH6-205ENST00000454137 PELP1Q8IZL8 1130 aaKnown RBP8.71□□□□□ -1.02
MSH6-205ENST00000454137 NUP155O75694 1391 aa8.71□□□□□ -1.02
MSH6-205ENST00000454137 A2MP01023 1474 aa8.7□□□□□ -1.02
MSH6-205ENST00000454137 TSPOAP1O95153 1857 aa8.7□□□□□ -1.02
MSH6-205ENST00000454137 LMTK2Q8IWU2 1503 aa8.7□□□□□ -1.02
MSH6-205ENST00000454137 HAP1P54257 671 aaPredicted RBP8.7□□□□□ -1.02
MSH6-205ENST00000454137 BBXQ8WY36 941 aaPredicted RBP8.7□□□□□ -1.02
MSH6-205ENST00000454137 RBM42Q9BTD8 480 aaKnown RBP8.7□□□□□ -1.02
MSH6-205ENST00000454137 RPRD2Q5VT52 1461 aaKnown RBP8.7□□□□□ -1.02
MSH6-205ENST00000454137 DIP2CQ9Y2E4 1556 aa8.69□□□□□ -1.02
MSH6-205ENST00000454137 ABCA6Q8N139 1617 aa8.69□□□□□ -1.02
MSH6-205ENST00000454137 TET3O43151 1660 aa8.69□□□□□ -1.02
MSH6-205ENST00000454137 CENPBP07199 599 aaPredicted RBP8.69□□□□□ -1.02
MSH6-205ENST00000454137 MROH1Q8NDA8 1641 aa8.69□□□□□ -1.02
MSH6-205ENST00000454137 SIN3AQ96ST3 1273 aa8.68□□□□□ -1.02
MSH6-205ENST00000454137 AGLP35573 1532 aa8.67□□□□□ -1.02
MSH6-205ENST00000454137 KANK1Q14678 1352 aa8.67□□□□□ -1.02
MSH6-205ENST00000454137 ZC3H13Q5T200 1668 aaKnown RBP8.67□□□□□ -1.02
MSH6-205ENST00000454137 NEURL4Q96JN8 1562 aa8.67□□□□□ -1.02
MSH6-205ENST00000454137 SPDYE1Q8NFV5 336 aaPredicted RBP8.66□□□□□ -1.02
MSH6-205ENST00000454137 CIZ1Q9ULV3 898 aaPredicted RBP8.66□□□□□ -1.02
MSH6-205ENST00000454137 TONSLQ96HA7 1378 aa8.65□□□□□ -1.02
MSH6-205ENST00000454137 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.02
MSH6-205ENST00000454137 NEUROD1Q13562 356 aa8.65□□□□□ -1.02
MSH6-205ENST00000454137 AKT1S1Q96B36 256 aa8.65□□□□□ -1.02
MSH6-205ENST00000454137 E9PCH4 1651 aa8.65□□□□□ -1.03
MSH6-205ENST00000454137 PTPRTO14522 1441 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms