RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 ZC3H15Q8WU90 426 aaKnown RBP7.98□□□□□ -1.13
HMGB1P15-201ENST00000453854 BCL2L12Q9HB09 334 aa7.98□□□□□ -1.13
HMGB1P15-201ENST00000453854 JPH4Q96JJ6 628 aa7.97□□□□□ -1.13
HMGB1P15-201ENST00000453854 ADAM33Q9BZ11 813 aa7.97□□□□□ -1.13
HMGB1P15-201ENST00000453854 VPS9D1Q9Y2B5 631 aa7.96□□□□□ -1.14
HMGB1P15-201ENST00000453854 DPYSL4O14531 572 aa7.94□□□□□ -1.14
HMGB1P15-201ENST00000453854 SMYD5Q6GMV2 418 aa7.94□□□□□ -1.14
HMGB1P15-201ENST00000453854 ZDHHC16Q969W1 377 aa7.94□□□□□ -1.14
HMGB1P15-201ENST00000453854 PCDHGA10Q9Y5H3 936 aa7.94□□□□□ -1.14
HMGB1P15-201ENST00000453854 TMEM132AQ24JP5 1023 aa7.93□□□□□ -1.14
HMGB1P15-201ENST00000453854 PTPREP23469 700 aa7.92□□□□□ -1.14
HMGB1P15-201ENST00000453854 ZBED2Q9BTP6 218 aa7.92□□□□□ -1.14
HMGB1P15-201ENST00000453854 ZMYND10O75800 440 aa7.91□□□□□ -1.14
HMGB1P15-201ENST00000453854 KCNH8Q96L42 1107 aa7.91□□□□□ -1.14
HMGB1P15-201ENST00000453854 SLC4A5Q9BY07 1137 aa7.91□□□□□ -1.14
HMGB1P15-201ENST00000453854 BHMG1C9JSJ3 638 aaPredicted RBP7.9□□□□□ -1.14
HMGB1P15-201ENST00000453854 COL9A1P20849 921 aa7.9□□□□□ -1.14
HMGB1P15-201ENST00000453854 KCTD12Q96CX2 325 aaKnown RBP7.9□□□□□ -1.14
HMGB1P15-201ENST00000453854 HCSTQ9UBK5 93 aa7.89□□□□□ -1.15
HMGB1P15-201ENST00000453854 SPDYE16A6NNV3 312 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P15-201ENST00000453854 PHF14O94880 888 aa7.88□□□□□ -1.15
HMGB1P15-201ENST00000453854 MLLT3P42568 568 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P15-201ENST00000453854 BRPF1P55201 1214 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P15-201ENST00000453854 PDIA6Q15084 440 aa7.87□□□□□ -1.15
HMGB1P15-201ENST00000453854 PROX2Q3B8N5 592 aa7.87□□□□□ -1.15
HMGB1P15-201ENST00000453854 BARGINQ6ZT62 677 aa7.87□□□□□ -1.15
HMGB1P15-201ENST00000453854 TYW1BQ6NUM6 668 aa7.86□□□□□ -1.15
HMGB1P15-201ENST00000453854 SLC24A3Q9HC58 644 aa7.86□□□□□ -1.15
HMGB1P15-201ENST00000453854 GTF3C3Q9Y5Q9 886 aa7.86□□□□□ -1.15
HMGB1P15-201ENST00000453854 DDX12PQ92771 950 aa7.85□□□□□ -1.15
HMGB1P15-201ENST00000453854 STAC3Q96MF2 364 aa7.85□□□□□ -1.15
HMGB1P15-201ENST00000453854 PPP1R3GB7ZBB8 358 aa7.84□□□□□ -1.15
HMGB1P15-201ENST00000453854 RBM26Q5T8P6 1007 aaKnown RBP7.84□□□□□ -1.15
HMGB1P15-201ENST00000453854 FBXW7Q969H0 707 aa7.83□□□□□ -1.16
HMGB1P15-201ENST00000453854 PLA2G2EQ9NZK7 142 aa7.83□□□□□ -1.16
HMGB1P15-201ENST00000453854 PTPN5P54829 565 aa7.82□□□□□ -1.16
HMGB1P15-201ENST00000453854 C6orf132Q5T0Z8 1188 aa7.82□□□□□ -1.16
HMGB1P15-201ENST00000453854 RBM33Q96EV2 1170 aaKnown RBP7.82□□□□□ -1.16
HMGB1P15-201ENST00000453854 PRIM1P49642 420 aaKnown RBP7.81□□□□□ -1.16
HMGB1P15-201ENST00000453854 THSD4Q6ZMP0 1018 aa7.81□□□□□ -1.16
HMGB1P15-201ENST00000453854 GPIHBP1Q8IV16 184 aa7.81□□□□□ -1.16
HMGB1P15-201ENST00000453854 MRPL50Q8N5N7 158 aaKnown RBP7.81□□□□□ -1.16
HMGB1P15-201ENST00000453854 EPAS1Q99814 870 aa7.81□□□□□ -1.16
HMGB1P15-201ENST00000453854 TSR1Q2NL82 804 aaKnown RBP7.79□□□□□ -1.16
HMGB1P15-201ENST00000453854 WNT2BQ93097 391 aa7.79□□□□□ -1.16
HMGB1P15-201ENST00000453854 RABGEF1Q9UJ41 708 aa7.79□□□□□ -1.16
HMGB1P15-201ENST00000453854 NEUROD2Q15784 382 aa7.78□□□□□ -1.16
HMGB1P15-201ENST00000453854 KIAA1468Q9P260 1216 aa7.78□□□□□ -1.16
HMGB1P15-201ENST00000453854 TIMELESSQ9UNS1 1208 aa7.78□□□□□ -1.16
HMGB1P15-201ENST00000453854 GPR37O15354 613 aa7.77□□□□□ -1.17
HMGB1P15-201ENST00000453854 EN1Q05925 392 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P15-201ENST00000453854 ERICH6Q7L0X2 663 aa7.77□□□□□ -1.17
HMGB1P15-201ENST00000453854 AK7Q96M32 723 aa7.77□□□□□ -1.17
HMGB1P15-201ENST00000453854 NBPF3Q9H094 633 aa7.77□□□□□ -1.17
HMGB1P15-201ENST00000453854 GOLGA8CPA6NN73 597 aa7.76□□□□□ -1.17
HMGB1P15-201ENST00000453854 TRIM6-TRIM34B2RNG4 842 aa7.75□□□□□ -1.17
HMGB1P15-201ENST00000453854 SEPT9Q9UHD8 586 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P15-201ENST00000453854 MAP3K7O43318 606 aa7.74□□□□□ -1.17
HMGB1P15-201ENST00000453854 GRXCR2A6NFK2 248 aa7.73□□□□□ -1.17
HMGB1P15-201ENST00000453854 OSBPP22059 807 aa7.73□□□□□ -1.17
HMGB1P15-201ENST00000453854 BCAMP50895 628 aa7.73□□□□□ -1.17
HMGB1P15-201ENST00000453854 TSKSQ9UJT2 592 aa7.73□□□□□ -1.17
HMGB1P15-201ENST00000453854 C3orf80F5H4A9 247 aa7.72□□□□□ -1.17
HMGB1P15-201ENST00000453854 ONECUT3O60422 494 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P15-201ENST00000453854 ZFRQ96KR1 1074 aaKnown RBP7.72□□□□□ -1.17
HMGB1P15-201ENST00000453854 FAM198AQ9UFP1 575 aa7.72□□□□□ -1.17
HMGB1P15-201ENST00000453854 TRIM66O15016 1216 aa7.71□□□□□ -1.18
HMGB1P15-201ENST00000453854 LAPTM4BQ86VI4 370 aa7.71□□□□□ -1.18
HMGB1P15-201ENST00000453854 KRI1Q8N9T8 703 aaKnown RBP7.71□□□□□ -1.18
HMGB1P15-201ENST00000453854 SOWAHBA6NEL2 793 aa7.7□□□□□ -1.18
HMGB1P15-201ENST00000453854 ANKK1Q8NFD2 765 aa7.7□□□□□ -1.18
HMGB1P15-201ENST00000453854 CDHR5Q9HBB8 845 aa7.7□□□□□ -1.18
HMGB1P15-201ENST00000453854 MINK1Q8N4C8 1332 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P15-201ENST00000453854 FAM98CQ17RN3 349 aaKnown RBP7.68□□□□□ -1.18
HMGB1P15-201ENST00000453854 CDCA7LQ96GN5 454 aa7.68□□□□□ -1.18
HMGB1P15-201ENST00000453854 SMAPO00193 183 aa7.67□□□□□ -1.18
HMGB1P15-201ENST00000453854 PRSS12P56730 875 aa7.67□□□□□ -1.18
HMGB1P15-201ENST00000453854 GPBP1L1Q9HC44 474 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P15-201ENST00000453854 WBP1LQ9NX94 342 aa7.67□□□□□ -1.18
HMGB1P15-201ENST00000453854 DAXXQ9UER7 740 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P15-201ENST00000453854 PDE4DQ08499 809 aa7.66□□□□□ -1.18
HMGB1P15-201ENST00000453854 MAP2K5Q13163 448 aa7.66□□□□□ -1.18
HMGB1P15-201ENST00000453854 KDM4CQ9H3R0 1056 aa7.66□□□□□ -1.18
HMGB1P15-201ENST00000453854 NUTM2FA1L443 756 aa7.65□□□□□ -1.18
HMGB1P15-201ENST00000453854 IRF6O14896 467 aa7.65□□□□□ -1.18
HMGB1P15-201ENST00000453854 GNPATO15228 680 aa7.65□□□□□ -1.18
HMGB1P15-201ENST00000453854 PACS2Q86VP3 889 aa7.65□□□□□ -1.18
HMGB1P15-201ENST00000453854 NPDC1Q9NQX5 325 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P15-201ENST00000453854 FCHSD2O94868 740 aa7.64□□□□□ -1.19
HMGB1P15-201ENST00000453854 HIC1Q14526 733 aa7.64□□□□□ -1.19
HMGB1P15-201ENST00000453854 IFFO2Q5TF58 517 aa7.64□□□□□ -1.19
HMGB1P15-201ENST00000453854 AMHR2Q16671 573 aa7.63□□□□□ -1.19
HMGB1P15-201ENST00000453854 CCDC102AQ96A19 550 aa7.63□□□□□ -1.19
HMGB1P15-201ENST00000453854 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P15-201ENST00000453854 PTGDRQ13258 359 aa7.62□□□□□ -1.19
HMGB1P15-201ENST00000453854 CERKQ8TCT0 537 aa7.62□□□□□ -1.19
HMGB1P15-201ENST00000453854 TATDN2Q93075 761 aa7.62□□□□□ -1.19
HMGB1P15-201ENST00000453854 A0A0G2JS52 829 aa7.61□□□□□ -1.19
HMGB1P15-201ENST00000453854 ITGBL1O95965 494 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P15-201ENST00000453854 FECHP22830 423 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms