RNA–Protein interactions for RNA: ENST00000453213.1

LINC00963-206, long intergenic non-protein coding RNA 963, humanhuman

TSL 3

Gene LINC00963, Length 469 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-206ENST00000453213 RNF17Q9BXT8 1623 aaKnown RBP14.11□□□□□ -0.15
LINC00963-206ENST00000453213 MED14O60244 1454 aa14.11□□□□□ -0.15
LINC00963-206ENST00000453213 CCDC18Q5T9S5 1454 aa14.11□□□□□ -0.15
LINC00963-206ENST00000453213 CDC42BPAQ5VT25 1732 aa14.1□□□□□ -0.15
LINC00963-206ENST00000453213 INO80Q9ULG1 1556 aaPredicted RBP14.1□□□□□ -0.15
LINC00963-206ENST00000453213 KIAA1107Q9UPP5 1409 aa14.1□□□□□ -0.15
LINC00963-206ENST00000453213 PLEKHH2Q8IVE3 1493 aa14.1□□□□□ -0.15
LINC00963-206ENST00000453213 LRRIQ1Q96JM4 1722 aa14.1□□□□□ -0.15
LINC00963-206ENST00000453213 CFDP1Q9UEE9 299 aaPredicted RBP14.09□□□□□ -0.15
LINC00963-206ENST00000453213 FAM135AQ9P2D6 1515 aa14.09□□□□□ -0.15
LINC00963-206ENST00000453213 GPATCH8Q9UKJ3 1502 aaKnown RBP14.08□□□□□ -0.16
LINC00963-206ENST00000453213 DEPDC5O75140 1603 aa14.08□□□□□ -0.16
LINC00963-206ENST00000453213 PZPP20742 1482 aa14.07□□□□□ -0.16
LINC00963-206ENST00000453213 SYNMO15061 1565 aa14.07□□□□□ -0.16
LINC00963-206ENST00000453213 UGGT1Q9NYU2 1555 aa14.07□□□□□ -0.16
LINC00963-206ENST00000453213 MIA2Q96PC5 1412 aa14.07□□□□□ -0.16
LINC00963-206ENST00000453213 NLRP1Q9C000 1473 aa14.06□□□□□ -0.16
LINC00963-206ENST00000453213 CASKIN1Q8WXD9 1431 aa14.06□□□□□ -0.16
LINC00963-206ENST00000453213 IQGAP1P46940 1657 aa14.05□□□□□ -0.16
LINC00963-206ENST00000453213 ADGBQ8N7X0 1667 aa14.05□□□□□ -0.16
LINC00963-206ENST00000453213 WASHC2CQ9Y4E1 1318 aa14.05□□□□□ -0.16
LINC00963-206ENST00000453213 KIF3BO15066 747 aa14.04□□□□□ -0.16
LINC00963-206ENST00000453213 DHX29Q7Z478 1369 aaKnown RBP14.04□□□□□ -0.16
LINC00963-206ENST00000453213 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
LINC00963-206ENST00000453213 KDM5DQ9BY66 1539 aa14.03□□□□□ -0.16
LINC00963-206ENST00000453213 STRCP1A6NGW2 1772 aa14.01□□□□□ -0.17
LINC00963-206ENST00000453213 FAM135BQ49AJ0 1406 aa14.01□□□□□ -0.17
LINC00963-206ENST00000453213 RTEL1-TNFRSF6BF6WH68 1400 aa13.99□□□□□ -0.17
LINC00963-206ENST00000453213 SETD1AO15047 1707 aaKnown RBP13.98□□□□□ -0.17
LINC00963-206ENST00000453213 ZNF644Q9H582 1327 aaPredicted RBP13.97□□□□□ -0.17
LINC00963-206ENST00000453213 UPF1Q92900 1129 aaKnown RBP eCLIP13.97□□□□□ -0.171e-6■■■□□ 15.7
LINC00963-206ENST00000453213 FYCO1Q9BQS8 1478 aa13.97□□□□□ -0.17
LINC00963-206ENST00000453213 CHIC1Q5VXU3 224 aa13.95□□□□□ -0.18
LINC00963-206ENST00000453213 MBD5Q9P267 1494 aa13.94□□□□□ -0.18
LINC00963-206ENST00000453213 SCAF11Q99590 1463 aaKnown RBP13.93□□□□□ -0.18
LINC00963-206ENST00000453213 TXNDC2Q86VQ3 553 aa13.92□□□□□ -0.18
LINC00963-206ENST00000453213 MTUS2Q5JR59 1369 aa13.92□□□□□ -0.18
LINC00963-206ENST00000453213 ZC3H13Q5T200 1668 aaKnown RBP13.91□□□□□ -0.18
LINC00963-206ENST00000453213 TMEM94Q12767 1356 aa13.91□□□□□ -0.18
LINC00963-206ENST00000453213 LTKP29376 864 aa13.9□□□□□ -0.18
LINC00963-206ENST00000453213 TRIM52Q96A61 297 aa13.9□□□□□ -0.18
LINC00963-206ENST00000453213 EID1Q9Y6B2 187 aa13.9□□□□□ -0.18
LINC00963-206ENST00000453213 ROBO1Q9Y6N7 1651 aa13.89□□□□□ -0.19
LINC00963-206ENST00000453213 JCADQ9P266 1359 aa13.89□□□□□ -0.19
LINC00963-206ENST00000453213 ERVK-7P63135 1459 aa13.88□□□□□ -0.19
LINC00963-206ENST00000453213 LRRC9Q6ZRR7 1453 aa13.88□□□□□ -0.19
LINC00963-206ENST00000453213 MEX3CQ5U5Q3 659 aaKnown RBP13.88□□□□□ -0.19
LINC00963-206ENST00000453213 ZNF772Q68DY9 489 aaPredicted RBP13.88□□□□□ -0.19
LINC00963-206ENST00000453213 XIRP1Q702N8 1843 aaKnown RBP13.87□□□□□ -0.19
LINC00963-206ENST00000453213 CCDC141Q6ZP82 1450 aa13.87□□□□□ -0.19
LINC00963-206ENST00000453213 RSPH4AQ5TD94 716 aa13.87□□□□□ -0.19
LINC00963-206ENST00000453213 PROSER2Q86WR7 435 aaPredicted RBP13.87□□□□□ -0.19
LINC00963-206ENST00000453213 ABCC3O15438 1527 aa13.85□□□□□ -0.19
LINC00963-206ENST00000453213 TIAM1Q13009 1591 aa13.85□□□□□ -0.19
LINC00963-206ENST00000453213 KCNA6P17658 529 aa13.85□□□□□ -0.19
LINC00963-206ENST00000453213 NCOA2Q15596 1464 aa13.85□□□□□ -0.19
LINC00963-206ENST00000453213 ARHGAP23Q9P227 1491 aa13.85□□□□□ -0.19
LINC00963-206ENST00000453213 SLIT1O75093 1534 aa13.85□□□□□ -0.19
LINC00963-206ENST00000453213 RBM33Q96EV2 1170 aaKnown RBP13.84□□□□□ -0.19
LINC00963-206ENST00000453213 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
LINC00963-206ENST00000453213 UBR1Q8IWV7 1749 aa13.84□□□□□ -0.19
LINC00963-206ENST00000453213 TSPY4P0CV99 314 aa13.83□□□□□ -0.2
LINC00963-206ENST00000453213 TSPY10P0CW01 314 aa13.83□□□□□ -0.2
LINC00963-206ENST00000453213 RXRBP28702 533 aa13.83□□□□□ -0.2
LINC00963-206ENST00000453213 SPATA31A6Q5VVP1 1343 aa13.83□□□□□ -0.2
LINC00963-206ENST00000453213 MSH6P52701 1360 aa13.83□□□□□ -0.2
LINC00963-206ENST00000453213 PHLPP1O60346 1717 aa13.81□□□□□ -0.2
LINC00963-206ENST00000453213 MAP3K1Q13233 1512 aa13.81□□□□□ -0.2
LINC00963-206ENST00000453213 STAG3Q9UJ98 1225 aa13.81□□□□□ -0.2
LINC00963-206ENST00000453213 TMEM2Q9UHN6 1383 aa13.8□□□□□ -0.2
LINC00963-206ENST00000453213 CAMSAP2Q08AD1 1489 aa13.8□□□□□ -0.2
LINC00963-206ENST00000453213 LRP6O75581 1613 aa13.79□□□□□ -0.2
LINC00963-206ENST00000453213 SLC26A8Q96RN1 970 aa13.79□□□□□ -0.2
LINC00963-206ENST00000453213 CEP162Q5TB80 1403 aa13.79□□□□□ -0.2
LINC00963-206ENST00000453213 PRDM15P57071 1507 aaPredicted RBP13.79□□□□□ -0.2
LINC00963-206ENST00000453213 FGD6Q6ZV73 1430 aa13.78□□□□□ -0.2
LINC00963-206ENST00000453213 EHBP1L1Q8N3D4 1523 aa13.78□□□□□ -0.2
LINC00963-206ENST00000453213 NKTRP30414 1462 aaKnown RBP13.77□□□□□ -0.21
LINC00963-206ENST00000453213 CDK12Q9NYV4 1490 aaPredicted RBP13.77□□□□□ -0.21
LINC00963-206ENST00000453213 SRCAPQ6ZRS2 3230 aa13.76□□□□□ -0.21
LINC00963-206ENST00000453213 COL16A1Q07092 1604 aaPredicted RBP13.75□□□□□ -0.21
LINC00963-206ENST00000453213 BCANQ96GW7 911 aa13.75□□□□□ -0.21
LINC00963-206ENST00000453213 ARHGEF5Q12774 1597 aa13.74□□□□□ -0.21
LINC00963-206ENST00000453213 FOXD1Q16676 465 aa13.73□□□□□ -0.21
LINC00963-206ENST00000453213 ARHGAP31Q2M1Z3 1444 aa13.73□□□□□ -0.21
LINC00963-206ENST00000453213 MROH1Q8NDA8 1641 aa13.72□□□□□ -0.21
LINC00963-206ENST00000453213 EIF2AK4Q9P2K8 1649 aaKnown RBP13.72□□□□□ -0.21
LINC00963-206ENST00000453213 NUTM2BA6NNL0 878 aaPredicted RBP13.72□□□□□ -0.21
LINC00963-206ENST00000453213 NUTM2EB1AL46 878 aaPredicted RBP13.72□□□□□ -0.21
LINC00963-206ENST00000453213 NUTM2AQ8IVF1 878 aaPredicted RBP13.72□□□□□ -0.21
LINC00963-206ENST00000453213 EFCAB6Q5THR3 1501 aa13.71□□□□□ -0.21
LINC00963-206ENST00000453213 CEP152O94986 1710 aa13.71□□□□□ -0.21
LINC00963-206ENST00000453213 C14orf37Q86TY3 774 aa13.71□□□□□ -0.21
LINC00963-206ENST00000453213 TET3O43151 1660 aa13.71□□□□□ -0.21
LINC00963-206ENST00000453213 PIK3C2BO00750 1634 aa13.71□□□□□ -0.22
LINC00963-206ENST00000453213 NWD1Q149M9 1564 aa13.71□□□□□ -0.22
LINC00963-206ENST00000453213 AFF2P51816 1311 aa13.7□□□□□ -0.22
LINC00963-206ENST00000453213 NUTM2DQ5VT03 806 aaPredicted RBP13.7□□□□□ -0.22
LINC00963-206ENST00000453213 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
LINC00963-206ENST00000453213 IDI1Q13907 227 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms