RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 PDE4AP27815 886 aa11.37□□□□□ -0.59
CSTF1-204ENST00000452950 C1orf115Q9H7X2 142 aa11.37□□□□□ -0.59
CSTF1-204ENST00000452950 PDE4DQ08499 809 aa11.36□□□□□ -0.59
CSTF1-204ENST00000452950 MFSD10Q14728 455 aa11.36□□□□□ -0.59
CSTF1-204ENST00000452950 RBM26Q5T8P6 1007 aaKnown RBP11.36□□□□□ -0.59
CSTF1-204ENST00000452950 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
CSTF1-204ENST00000452950 TRIM66O15016 1216 aa11.35□□□□□ -0.59
CSTF1-204ENST00000452950 DDX27Q96GQ7 796 aaKnown RBP11.33□□□□□ -0.6
CSTF1-204ENST00000452950 KDM4FA0A1W2PPD8 638 aa11.32□□□□□ -0.6
CSTF1-204ENST00000452950 TBC1D12O60347 775 aa11.31□□□□□ -0.6
CSTF1-204ENST00000452950 APBB1O00213 710 aa11.3□□□□□ -0.6
CSTF1-204ENST00000452950 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
CSTF1-204ENST00000452950 ARID3CA6NKF2 412 aa11.29□□□□□ -0.6
CSTF1-204ENST00000452950 CAMK2BQ13554 666 aa11.29□□□□□ -0.6
CSTF1-204ENST00000452950 ZBTB7CA1YPR0 619 aa11.28□□□□□ -0.6
CSTF1-204ENST00000452950 PDIA4P13667 645 aaKnown RBP11.28□□□□□ -0.6
CSTF1-204ENST00000452950 MLLT3P42568 568 aaPredicted RBP11.28□□□□□ -0.6
CSTF1-204ENST00000452950 ANKRD13DQ6ZTN6 518 aa11.28□□□□□ -0.6
CSTF1-204ENST00000452950 FLIIQ13045 1269 aa11.27□□□□□ -0.61
CSTF1-204ENST00000452950 OXER1Q8TDS5 423 aa11.27□□□□□ -0.61
CSTF1-204ENST00000452950 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.61
CSTF1-204ENST00000452950 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
CSTF1-204ENST00000452950 AXIN2Q9Y2T1 843 aa11.26□□□□□ -0.61
CSTF1-204ENST00000452950 CCDC9Q9Y3X0 531 aaKnown RBP11.26□□□□□ -0.61
CSTF1-204ENST00000452950 PSDA5PKW4 1024 aaPredicted RBP11.25□□□□□ -0.61
CSTF1-204ENST00000452950 LSM11P83369 360 aaKnown RBP eCLIP11.25□□□□□ -0.61
CSTF1-204ENST00000452950 FAM117AQ9C073 453 aa11.25□□□□□ -0.61
CSTF1-204ENST00000452950 PBX2P40425 430 aa11.24□□□□□ -0.61
CSTF1-204ENST00000452950 DDRGK1Q96HY6 314 aa11.22□□□□□ -0.61
CSTF1-204ENST00000452950 MYT1LQ9UL68 1186 aa11.21□□□□□ -0.61
CSTF1-204ENST00000452950 ARHGAP33O14559 1287 aa11.19□□□□□ -0.62
CSTF1-204ENST00000452950 PLEKHG3A1L390 1219 aa11.18□□□□□ -0.62
CSTF1-204ENST00000452950 RNF166Q96A37 237 aaPredicted RBP11.18□□□□□ -0.62
CSTF1-204ENST00000452950 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
CSTF1-204ENST00000452950 PTGER2P43116 358 aa11.16□□□□□ -0.62
CSTF1-204ENST00000452950 PSEN2P49810 448 aa11.14□□□□□ -0.63
CSTF1-204ENST00000452950 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
CSTF1-204ENST00000452950 CCDC82Q8N4S0 544 aa11.14□□□□□ -0.63
CSTF1-204ENST00000452950 ANO8Q9HCE9 1232 aaPredicted RBP11.14□□□□□ -0.63
CSTF1-204ENST00000452950 MINK1Q8N4C8 1332 aaPredicted RBP11.13□□□□□ -0.63
CSTF1-204ENST00000452950 EVI5O60447 810 aa11.13□□□□□ -0.63
CSTF1-204ENST00000452950 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
CSTF1-204ENST00000452950 A6NJR5 290 aa11.12□□□□□ -0.63
CSTF1-204ENST00000452950 SPDYE16A6NNV3 312 aaPredicted RBP11.12□□□□□ -0.63
CSTF1-204ENST00000452950 GPR37O15354 613 aa11.12□□□□□ -0.63
CSTF1-204ENST00000452950 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
CSTF1-204ENST00000452950 ZNF454Q8N9F8 522 aa11.12□□□□□ -0.63
CSTF1-204ENST00000452950 ONECUT3O60422 494 aaPredicted RBP11.11□□□□□ -0.63
CSTF1-204ENST00000452950 TRAK2O60296 914 aa11.1□□□□□ -0.63
CSTF1-204ENST00000452950 ADGRD1Q6QNK2 874 aa11.1□□□□□ -0.63
CSTF1-204ENST00000452950 NECTIN2Q92692 538 aa11.1□□□□□ -0.63
CSTF1-204ENST00000452950 GOPCQ9HD26 462 aa11.1□□□□□ -0.63
CSTF1-204ENST00000452950 DPYSL4O14531 572 aa11.09□□□□□ -0.63
CSTF1-204ENST00000452950 MAP2K5Q13163 448 aa11.09□□□□□ -0.63
CSTF1-204ENST00000452950 PDIA6Q15084 440 aa11.09□□□□□ -0.63
CSTF1-204ENST00000452950 AMHR2Q16671 573 aa11.09□□□□□ -0.63
CSTF1-204ENST00000452950 CCDC102AQ96A19 550 aa11.09□□□□□ -0.63
CSTF1-204ENST00000452950 KCNK17Q96T54 332 aa11.09□□□□□ -0.63
CSTF1-204ENST00000452950 FOSBP53539 338 aa11.08□□□□□ -0.64
CSTF1-204ENST00000452950 PARP9Q8IXQ6 854 aa11.08□□□□□ -0.64
CSTF1-204ENST00000452950 CLUAP1Q96AJ1 413 aa11.08□□□□□ -0.64
CSTF1-204ENST00000452950 TK2O00142 265 aa11.06□□□□□ -0.64
CSTF1-204ENST00000452950 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
CSTF1-204ENST00000452950 IRF6O14896 467 aa11.05□□□□□ -0.64
CSTF1-204ENST00000452950 BCL2L12Q9HB09 334 aa11.05□□□□□ -0.64
CSTF1-204ENST00000452950 JPH4Q96JJ6 628 aa11.04□□□□□ -0.64
CSTF1-204ENST00000452950 HRO43593 1189 aa11.03□□□□□ -0.64
CSTF1-204ENST00000452950 ZDHHC16Q969W1 377 aa11.02□□□□□ -0.65
CSTF1-204ENST00000452950 PCMTD1Q96MG8 357 aaPredicted RBP11.02□□□□□ -0.65
CSTF1-204ENST00000452950 NUTM2FA1L443 756 aa11.01□□□□□ -0.65
CSTF1-204ENST00000452950 PTPREP23469 700 aa11□□□□□ -0.65
CSTF1-204ENST00000452950 TTLL12Q14166 644 aaPredicted RBP11□□□□□ -0.65
CSTF1-204ENST00000452950 ADAM33Q9BZ11 813 aa11□□□□□ -0.65
CSTF1-204ENST00000452950 KCTD17Q8N5Z5 321 aa10.99□□□□□ -0.65
CSTF1-204ENST00000452950 TRAIPQ9BWF2 469 aa10.99□□□□□ -0.65
CSTF1-204ENST00000452950 VPS9D1Q9Y2B5 631 aa10.99□□□□□ -0.65
CSTF1-204ENST00000452950 PCDHGA10Q9Y5H3 936 aa10.99□□□□□ -0.65
CSTF1-204ENST00000452950 MCM6Q14566 821 aa10.98□□□□□ -0.65
CSTF1-204ENST00000452950 STAC3Q96MF2 364 aa10.98□□□□□ -0.65
CSTF1-204ENST00000452950 GNPATO15228 680 aa10.97□□□□□ -0.65
CSTF1-204ENST00000452950 PROSER2Q86WR7 435 aaPredicted RBP10.95□□□□□ -0.66
CSTF1-204ENST00000452950 CCDC97Q96F63 343 aaPredicted RBP10.95□□□□□ -0.66
CSTF1-204ENST00000452950 SLC4A5Q9BY07 1137 aa10.95□□□□□ -0.66
CSTF1-204ENST00000452950 GRXCR2A6NFK2 248 aa10.94□□□□□ -0.66
CSTF1-204ENST00000452950 PHF14O94880 888 aa10.94□□□□□ -0.66
CSTF1-204ENST00000452950 ZBED2Q9BTP6 218 aa10.94□□□□□ -0.66
CSTF1-204ENST00000452950 SERPINA10Q9UK55 444 aa10.94□□□□□ -0.66
CSTF1-204ENST00000452950 HIC1Q14526 733 aa10.93□□□□□ -0.66
CSTF1-204ENST00000452950 ZNF777Q9ULD5 760 aaPredicted RBP10.93□□□□□ -0.66
CSTF1-204ENST00000452950 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
CSTF1-204ENST00000452950 GIGYF2Q6Y7W6 1299 aaKnown RBP10.92□□□□□ -0.66
CSTF1-204ENST00000452950 HCSTQ9UBK5 93 aa10.92□□□□□ -0.66
CSTF1-204ENST00000452950 FCHSD2O94868 740 aa10.91□□□□□ -0.66
CSTF1-204ENST00000452950 FBXW7Q969H0 707 aa10.91□□□□□ -0.66
CSTF1-204ENST00000452950 BHMG1C9JSJ3 638 aaPredicted RBP10.9□□□□□ -0.66
CSTF1-204ENST00000452950 SH3D19Q5HYK7 790 aa10.9□□□□□ -0.66
CSTF1-204ENST00000452950 KCTD12Q96CX2 325 aaKnown RBP10.9□□□□□ -0.66
CSTF1-204ENST00000452950 RAD21O60216 631 aa10.89□□□□□ -0.67
CSTF1-204ENST00000452950 MS4A1P11836 297 aa10.89□□□□□ -0.67
CSTF1-204ENST00000452950 FECHP22830 423 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms