RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 CCDC141Q6ZP82 1450 aa29.05■■■□□ 2.24
HIGD1A-204ENST00000452906 PTPRKQ15262 1439 aa29.05■■■□□ 2.24
HIGD1A-204ENST00000452906 ACIN1Q9UKV3 1341 aaKnown RBP29.05■■■□□ 2.24
HIGD1A-204ENST00000452906 RSPH4AQ5TD94 716 aa29.05■■■□□ 2.24
HIGD1A-204ENST00000452906 CLTCQ00610 1675 aaKnown RBP29.05■■■□□ 2.24
HIGD1A-204ENST00000452906 ABCC5O15440 1437 aa29.04■■■□□ 2.24
HIGD1A-204ENST00000452906 STRCQ7RTU9 1775 aa29.04■■■□□ 2.24
HIGD1A-204ENST00000452906 NPATQ14207 1427 aa29.03■■■□□ 2.24
HIGD1A-204ENST00000452906 FBXO41Q8TF61 875 aa29.03■■■□□ 2.24
HIGD1A-204ENST00000452906 RAB3GAP2Q9H2M9 1393 aa29.02■■■□□ 2.24
HIGD1A-204ENST00000452906 PPP6R1Q9UPN7 881 aa29■■■□□ 2.23
HIGD1A-204ENST00000452906 ZMYM3Q14202 1370 aa29■■■□□ 2.23
HIGD1A-204ENST00000452906 ADGRL2O95490 1459 aa28.98■■■□□ 2.23
HIGD1A-204ENST00000452906 NAIPQ13075 1403 aa28.97■■■□□ 2.23
HIGD1A-204ENST00000452906 DMRT2Q9Y5R5 561 aa28.97■■■□□ 2.23
HIGD1A-204ENST00000452906 DHX29Q7Z478 1369 aaKnown RBP28.96■■■□□ 2.23
HIGD1A-204ENST00000452906 CLSPNQ9HAW4 1339 aa28.94■■■□□ 2.22
HIGD1A-204ENST00000452906 MAST1Q9Y2H9 1570 aa28.93■■■□□ 2.22
HIGD1A-204ENST00000452906 FAM135AQ9P2D6 1515 aa28.93■■■□□ 2.22
HIGD1A-204ENST00000452906 TSPY4P0CV99 314 aa28.92■■■□□ 2.22
HIGD1A-204ENST00000452906 TSPY10P0CW01 314 aa28.92■■■□□ 2.22
HIGD1A-204ENST00000452906 GGT6Q6P531 493 aa28.92■■■□□ 2.22
HIGD1A-204ENST00000452906 ANKRD30AQ9BXX3 1397 aa28.91■■■□□ 2.22
HIGD1A-204ENST00000452906 ZNF142P52746 1687 aaPredicted RBP28.91■■■□□ 2.22
HIGD1A-204ENST00000452906 MYO3AQ8NEV4 1616 aa28.89■■■□□ 2.22
HIGD1A-204ENST00000452906 CHIC2Q9UKJ5 165 aa28.87■■■□□ 2.21
HIGD1A-204ENST00000452906 DHX57Q6P158 1386 aaKnown RBP28.87■■■□□ 2.21
HIGD1A-204ENST00000452906 PTPRTO14522 1441 aa28.86■■■□□ 2.21
HIGD1A-204ENST00000452906 NCOA1Q15788 1441 aa28.86■■■□□ 2.21
HIGD1A-204ENST00000452906 CERKQ8TCT0 537 aa28.83■■■□□ 2.21
HIGD1A-204ENST00000452906 KDM5DQ9BY66 1539 aa28.83■■■□□ 2.21
HIGD1A-204ENST00000452906 CAMSAP1Q5T5Y3 1602 aa28.83■■■□□ 2.21
HIGD1A-204ENST00000452906 RRP7BPQ9NSQ0 103 aa28.82■■■□□ 2.2
HIGD1A-204ENST00000452906 CEP170BQ9Y4F5 1589 aaPredicted RBP28.81■■■□□ 2.2
HIGD1A-204ENST00000452906 KIF3BO15066 747 aa28.81■■■□□ 2.2
HIGD1A-204ENST00000452906 RNF17Q9BXT8 1623 aaKnown RBP28.77■■■□□ 2.2
HIGD1A-204ENST00000452906 EIF2AK4Q9P2K8 1649 aaKnown RBP28.77■■■□□ 2.2
HIGD1A-204ENST00000452906 PLA2R1Q13018 1463 aa28.76■■■□□ 2.19
HIGD1A-204ENST00000452906 PZPP20742 1482 aa28.74■■■□□ 2.19
HIGD1A-204ENST00000452906 ZC3H13Q5T200 1668 aaKnown RBP28.74■■■□□ 2.19
HIGD1A-204ENST00000452906 A2ML1A8K2U0 1454 aa28.72■■■□□ 2.19
HIGD1A-204ENST00000452906 WASHC2CQ9Y4E1 1318 aa28.71■■■□□ 2.19
HIGD1A-204ENST00000452906 KIF15Q9NS87 1388 aa28.7■■■□□ 2.18
HIGD1A-204ENST00000452906 ANKRD50Q9ULJ7 1429 aa28.69■■■□□ 2.18
HIGD1A-204ENST00000452906 DUOX2Q9NRD8 1548 aa28.67■■■□□ 2.18
HIGD1A-204ENST00000452906 TNRQ92752 1358 aa28.66■■■□□ 2.18
HIGD1A-204ENST00000452906 PKD2Q13563 968 aa28.66■■■□□ 2.18
HIGD1A-204ENST00000452906 LTBP4Q8N2S1 1624 aa28.65■■■□□ 2.18
HIGD1A-204ENST00000452906 ABCC3O15438 1527 aa28.63■■■□□ 2.17
HIGD1A-204ENST00000452906 MROH1Q8NDA8 1641 aa28.62■■■□□ 2.17
HIGD1A-204ENST00000452906 POLR1AO95602 1720 aaPredicted RBP28.62■■■□□ 2.17
HIGD1A-204ENST00000452906 IQSEC2Q5JU85 1478 aa28.61■■■□□ 2.17
HIGD1A-204ENST00000452906 NCKAP5LQ9HCH0 1330 aa28.61■■■□□ 2.17
HIGD1A-204ENST00000452906 NLRP1Q9C000 1473 aa28.6■■■□□ 2.17
HIGD1A-204ENST00000452906 FBXO31Q5XUX0 539 aaPredicted RBP28.6■■■□□ 2.17
HIGD1A-204ENST00000452906 TRIM52Q96A61 297 aa28.6■■■□□ 2.17
HIGD1A-204ENST00000452906 ERBINQ96RT1 1412 aa28.6■■■□□ 2.17
HIGD1A-204ENST00000452906 CEP152O94986 1710 aa28.58■■■□□ 2.17
HIGD1A-204ENST00000452906 SPATA31D1Q6ZQQ2 1576 aa28.55■■■□□ 2.16
HIGD1A-204ENST00000452906 PRDM15P57071 1507 aaPredicted RBP28.55■■■□□ 2.16
HIGD1A-204ENST00000452906 UNC13BO14795 1591 aa28.54■■■□□ 2.16
HIGD1A-204ENST00000452906 DEPDC5O75140 1603 aa28.52■■■□□ 2.16
HIGD1A-204ENST00000452906 UGGT1Q9NYU2 1555 aa28.51■■■□□ 2.15
HIGD1A-204ENST00000452906 CFAP65Q6ZU64 1925 aaKnown RBP28.51■■■□□ 2.15
HIGD1A-204ENST00000452906 NEURL4Q96JN8 1562 aa28.5■■■□□ 2.15
HIGD1A-204ENST00000452906 ERVK-7P63135 1459 aa28.49■■■□□ 2.15
HIGD1A-204ENST00000452906 THEMISQ8N1K5 641 aaPredicted RBP28.47■■■□□ 2.15
HIGD1A-204ENST00000452906 ZNF335Q9H4Z2 1342 aaPredicted RBP28.46■■■□□ 2.15
HIGD1A-204ENST00000452906 MPHOSPH9Q99550 1183 aa28.46■■■□□ 2.15
HIGD1A-204ENST00000452906 ARHGAP31Q2M1Z3 1444 aa28.45■■■□□ 2.15
HIGD1A-204ENST00000452906 TIMELESSQ9UNS1 1208 aa28.44■■■□□ 2.14
HIGD1A-204ENST00000452906 ANKLE2Q86XL3 938 aa28.42■■■□□ 2.14
HIGD1A-204ENST00000452906 IQGAP3Q86VI3 1631 aa28.42■■■□□ 2.14
HIGD1A-204ENST00000452906 NUP155O75694 1391 aa28.41■■■□□ 2.14
HIGD1A-204ENST00000452906 SLC4A1APQ9BWU0 796 aaKnown RBP28.41■■■□□ 2.14
HIGD1A-204ENST00000452906 MED14O60244 1454 aa28.4■■■□□ 2.14
HIGD1A-204ENST00000452906 KANK1Q14678 1352 aa28.39■■■□□ 2.14
HIGD1A-204ENST00000452906 UBR1Q8IWV7 1749 aa28.39■■■□□ 2.14
HIGD1A-204ENST00000452906 IQGAP1P46940 1657 aa28.37■■■□□ 2.13
HIGD1A-204ENST00000452906 VWDEQ8N2E2 1590 aa28.37■■■□□ 2.13
HIGD1A-204ENST00000452906 CPS1P31327 1500 aa28.36■■■□□ 2.13
HIGD1A-204ENST00000452906 LMTK2Q8IWU2 1503 aa28.36■■■□□ 2.13
HIGD1A-204ENST00000452906 NPHP4O75161 1426 aaPredicted RBP28.35■■■□□ 2.13
HIGD1A-204ENST00000452906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.33■■■□□ 2.13
HIGD1A-204ENST00000452906 KDM5AP29375 1690 aaKnown RBP28.3■■■□□ 2.12
HIGD1A-204ENST00000452906 ANKRD30BQ9BXX2 1392 aa28.28■■■□□ 2.12
HIGD1A-204ENST00000452906 SLIT1O75093 1534 aa28.27■■■□□ 2.12
HIGD1A-204ENST00000452906 EFCAB6Q5THR3 1501 aa28.27■■■□□ 2.12
HIGD1A-204ENST00000452906 TONSLQ96HA7 1378 aa28.26■■■□□ 2.12
HIGD1A-204ENST00000452906 PIK3C2BO00750 1634 aa28.25■■■□□ 2.11
HIGD1A-204ENST00000452906 ARHGAP23Q9P227 1491 aa28.25■■■□□ 2.11
HIGD1A-204ENST00000452906 TET3O43151 1660 aa28.24■■■□□ 2.11
HIGD1A-204ENST00000452906 SCAF11Q99590 1463 aaKnown RBP28.24■■■□□ 2.11
HIGD1A-204ENST00000452906 NEUROD1Q13562 356 aa28.24■■■□□ 2.11
HIGD1A-204ENST00000452906 UBAP1LF5GYI3 381 aa28.23■■■□□ 2.11
HIGD1A-204ENST00000452906 SIN3AQ96ST3 1273 aa28.23■■■□□ 2.11
HIGD1A-204ENST00000452906 RPRD2Q5VT52 1461 aaKnown RBP28.21■■■□□ 2.11
HIGD1A-204ENST00000452906 SYNMO15061 1565 aa28.2■■■□□ 2.1
HIGD1A-204ENST00000452906 NOS1P29475 1434 aa28.18■■■□□ 2.1
HIGD1A-204ENST00000452906 STRCP1A6NGW2 1772 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms