RNA–Protein interactions for RNA: ENST00000451538.1

CUL3-207, Transcript of cullin 3, humanhuman

TSL 5

Gene CUL3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-207ENST00000451538 LSM11P83369 360 aaKnown RBP eCLIP13.57□□□□□ -0.24
CUL3-207ENST00000451538 PDE4DQ08499 809 aa13.56□□□□□ -0.24
CUL3-207ENST00000451538 KDM4CQ9H3R0 1056 aa13.56□□□□□ -0.24
CUL3-207ENST00000451538 GPR37O15354 613 aa13.54□□□□□ -0.24
CUL3-207ENST00000451538 NUDT7P0C024 238 aa13.53□□□□□ -0.24
CUL3-207ENST00000451538 IL27Q8NEV9 243 aa13.53□□□□□ -0.24
CUL3-207ENST00000451538 SLC34A2O95436 690 aa13.52□□□□□ -0.25
CUL3-207ENST00000451538 PBX2P40425 430 aa13.52□□□□□ -0.25
CUL3-207ENST00000451538 TBC1D12O60347 775 aa13.51□□□□□ -0.25
CUL3-207ENST00000451538 DDX12PQ92771 950 aa13.51□□□□□ -0.25
CUL3-207ENST00000451538 OXER1Q8TDS5 423 aa13.5□□□□□ -0.25
CUL3-207ENST00000451538 MINK1Q8N4C8 1332 aaPredicted RBP13.49□□□□□ -0.25
CUL3-207ENST00000451538 LHX6Q9UPM6 363 aa13.49□□□□□ -0.25
CUL3-207ENST00000451538 PCDHGA4Q9Y5G9 962 aa13.49□□□□□ -0.25
CUL3-207ENST00000451538 MAP2K5Q13163 448 aa13.48□□□□□ -0.25
CUL3-207ENST00000451538 OSBPP22059 807 aa13.47□□□□□ -0.25
CUL3-207ENST00000451538 CCDC102AQ96A19 550 aa13.47□□□□□ -0.25
CUL3-207ENST00000451538 FCHSD2O94868 740 aa13.46□□□□□ -0.25
CUL3-207ENST00000451538 GNPATO15228 680 aa13.45□□□□□ -0.26
CUL3-207ENST00000451538 POTEEQ6S8J3 1075 aa13.45□□□□□ -0.26
CUL3-207ENST00000451538 EVI5O60447 810 aa13.44□□□□□ -0.26
CUL3-207ENST00000451538 HIC1Q14526 733 aa13.44□□□□□ -0.26
CUL3-207ENST00000451538 AXIN2Q9Y2T1 843 aa13.42□□□□□ -0.26
CUL3-207ENST00000451538 IRF6O14896 467 aa13.41□□□□□ -0.26
CUL3-207ENST00000451538 ARXQ96QS3 562 aa13.4□□□□□ -0.26
CUL3-207ENST00000451538 PSDA5PKW4 1024 aaPredicted RBP13.37□□□□□ -0.27
CUL3-207ENST00000451538 FECHP22830 423 aa13.36□□□□□ -0.27
CUL3-207ENST00000451538 TTLL12Q14166 644 aaPredicted RBP13.36□□□□□ -0.27
CUL3-207ENST00000451538 AMHR2Q16671 573 aa13.36□□□□□ -0.27
CUL3-207ENST00000451538 DDRGK1Q96HY6 314 aa13.36□□□□□ -0.27
CUL3-207ENST00000451538 FAM117AQ9C073 453 aa13.36□□□□□ -0.27
CUL3-207ENST00000451538 ARHGAP33O14559 1287 aa13.35□□□□□ -0.27
CUL3-207ENST00000451538 SUPT5HO00267 1087 aaKnown RBP13.34□□□□□ -0.27
CUL3-207ENST00000451538 PARP9Q8IXQ6 854 aa13.34□□□□□ -0.27
CUL3-207ENST00000451538 PTCD2Q8WV60 388 aaKnown RBP13.34□□□□□ -0.27
CUL3-207ENST00000451538 HCSTQ9UBK5 93 aa13.34□□□□□ -0.27
CUL3-207ENST00000451538 PTGDRQ13258 359 aa13.33□□□□□ -0.28
CUL3-207ENST00000451538 ADGRD1Q6QNK2 874 aa13.33□□□□□ -0.28
CUL3-207ENST00000451538 KDM4FA0A1W2PPD8 638 aa13.32□□□□□ -0.28
CUL3-207ENST00000451538 PRIM1P49642 420 aaKnown RBP13.32□□□□□ -0.28
CUL3-207ENST00000451538 PLA2G2EQ9NZK7 142 aa13.3□□□□□ -0.28
CUL3-207ENST00000451538 MAP3K7O43318 606 aa13.29□□□□□ -0.28
CUL3-207ENST00000451538 TK2O00142 265 aa13.27□□□□□ -0.29
CUL3-207ENST00000451538 EN1Q05925 392 aaPredicted RBP13.27□□□□□ -0.29
CUL3-207ENST00000451538 HOMEZQ8IX15 550 aa13.27□□□□□ -0.29
CUL3-207ENST00000451538 EPAS1Q99814 870 aa13.27□□□□□ -0.29
CUL3-207ENST00000451538 PHF14O94880 888 aa13.26□□□□□ -0.29
CUL3-207ENST00000451538 RBM33Q96EV2 1170 aaKnown RBP13.26□□□□□ -0.29
CUL3-207ENST00000451538 CDHR5Q9HBB8 845 aa13.26□□□□□ -0.29
CUL3-207ENST00000451538 PLEKHG3A1L390 1219 aa13.25□□□□□ -0.29
CUL3-207ENST00000451538 ANO8Q9HCE9 1232 aaPredicted RBP13.24□□□□□ -0.29
CUL3-207ENST00000451538 HRO43593 1189 aa13.23□□□□□ -0.29
CUL3-207ENST00000451538 GIGYF2Q6Y7W6 1299 aaKnown RBP13.23□□□□□ -0.29
CUL3-207ENST00000451538 DMRTA1Q5VZB9 504 aa13.22□□□□□ -0.29
CUL3-207ENST00000451538 PSEN2P49810 448 aa13.21□□□□□ -0.29
CUL3-207ENST00000451538 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
CUL3-207ENST00000451538 TYW1BQ6NUM6 668 aa13.2□□□□□ -0.3
CUL3-207ENST00000451538 ZMYND15Q9H091 742 aa13.19□□□□□ -0.3
CUL3-207ENST00000451538 PCDHGA10Q9Y5H3 936 aa13.18□□□□□ -0.3
CUL3-207ENST00000451538 TSR1Q2NL82 804 aaKnown RBP13.17□□□□□ -0.3
CUL3-207ENST00000451538 CLCN1P35523 988 aa13.16□□□□□ -0.3
CUL3-207ENST00000451538 FBXW7Q969H0 707 aa13.16□□□□□ -0.3
CUL3-207ENST00000451538 NPDC1Q9NQX5 325 aaPredicted RBP13.16□□□□□ -0.3
CUL3-207ENST00000451538 MS4A1P11836 297 aa13.15□□□□□ -0.3
CUL3-207ENST00000451538 JPH4Q96JJ6 628 aa13.15□□□□□ -0.3
CUL3-207ENST00000451538 MDM2Q00987 491 aaPredicted RBP13.14□□□□□ -0.31
CUL3-207ENST00000451538 STAC3Q96MF2 364 aa13.14□□□□□ -0.31
CUL3-207ENST00000451538 PCMTD1Q96MG8 357 aaPredicted RBP13.14□□□□□ -0.31
CUL3-207ENST00000451538 RSPH6AQ9H0K4 717 aa13.14□□□□□ -0.31
CUL3-207ENST00000451538 GPCPD1Q9NPB8 672 aa13.13□□□□□ -0.31
CUL3-207ENST00000451538 KCTD12Q96CX2 325 aaKnown RBP13.12□□□□□ -0.31
CUL3-207ENST00000451538 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
CUL3-207ENST00000451538 REPIN1Q9BWE0 567 aaKnown RBP13.12□□□□□ -0.31
CUL3-207ENST00000451538 GOPCQ9HD26 462 aa13.12□□□□□ -0.31
CUL3-207ENST00000451538 FLIIQ13045 1269 aa13.09□□□□□ -0.31
CUL3-207ENST00000451538 KCNK17Q96T54 332 aa13.09□□□□□ -0.31
CUL3-207ENST00000451538 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
CUL3-207ENST00000451538 ZNF454Q8N9F8 522 aa13.08□□□□□ -0.32
CUL3-207ENST00000451538 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
CUL3-207ENST00000451538 FAM161AQ3B820 660 aa13.06□□□□□ -0.32
CUL3-207ENST00000451538 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
CUL3-207ENST00000451538 OATP04181 439 aa13.05□□□□□ -0.32
CUL3-207ENST00000451538 SSTR3P32745 418 aaPredicted RBP13.05□□□□□ -0.32
CUL3-207ENST00000451538 FOSBP53539 338 aa13.05□□□□□ -0.32
CUL3-207ENST00000451538 ZDHHC16Q969W1 377 aa13.05□□□□□ -0.32
CUL3-207ENST00000451538 PHOX2BQ99453 314 aa13.05□□□□□ -0.32
CUL3-207ENST00000451538 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
CUL3-207ENST00000451538 SH3D19Q5HYK7 790 aa13.04□□□□□ -0.32
CUL3-207ENST00000451538 C6orf132Q5T0Z8 1188 aa13.04□□□□□ -0.32
CUL3-207ENST00000451538 METTL3Q86U44 580 aaKnown RBP13.04□□□□□ -0.32
CUL3-207ENST00000451538 TMUB1Q9BVT8 246 aa13.04□□□□□ -0.32
CUL3-207ENST00000451538 NLRP7Q8WX94 980 aa13.02□□□□□ -0.33
CUL3-207ENST00000451538 BEGAINQ9BUH8 593 aa13.02□□□□□ -0.33
CUL3-207ENST00000451538 SLC4A5Q9BY07 1137 aa13.01□□□□□ -0.33
CUL3-207ENST00000451538 BCL2L12Q9HB09 334 aa13□□□□□ -0.33
CUL3-207ENST00000451538 ADGRG1Q9Y653 693 aa13□□□□□ -0.33
CUL3-207ENST00000451538 FAM217BQ9NTX9 383 aaPredicted RBP12.99□□□□□ -0.33
CUL3-207ENST00000451538 PTPN5P54829 565 aa12.98□□□□□ -0.33
CUL3-207ENST00000451538 PXYLP1Q8TE99 480 aa12.98□□□□□ -0.33
CUL3-207ENST00000451538 RBM27Q9P2N5 1060 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms