RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 PTPRKQ15262 1439 aa28.62■■■□□ 2.17
COPS7B-215ENST00000450501 ERBINQ96RT1 1412 aa28.62■■■□□ 2.17
COPS7B-215ENST00000450501 RNF17Q9BXT8 1623 aaKnown RBP28.61■■■□□ 2.17
COPS7B-215ENST00000450501 ITGAEP38570 1179 aa28.6■■■□□ 2.17
COPS7B-215ENST00000450501 MROH2AA6NES4 1674 aa28.6■■■□□ 2.17
COPS7B-215ENST00000450501 CLTCQ00610 1675 aaKnown RBP28.59■■■□□ 2.17
COPS7B-215ENST00000450501 PLPPR3Q6T4P5 718 aa28.59■■■□□ 2.17
COPS7B-215ENST00000450501 ROCK1Q13464 1354 aa28.58■■■□□ 2.17
COPS7B-215ENST00000450501 FAM135AQ9P2D6 1515 aa28.58■■■□□ 2.17
COPS7B-215ENST00000450501 C3P01024 1663 aa28.57■■■□□ 2.16
COPS7B-215ENST00000450501 CEBPAP49715 358 aaPredicted RBP28.54■■■□□ 2.16
COPS7B-215ENST00000450501 KDM5DQ9BY66 1539 aa28.53■■■□□ 2.16
COPS7B-215ENST00000450501 ZMYM3Q14202 1370 aa28.52■■■□□ 2.16
COPS7B-215ENST00000450501 WASHC2CQ9Y4E1 1318 aa28.52■■■□□ 2.16
COPS7B-215ENST00000450501 ANKRD50Q9ULJ7 1429 aa28.51■■■□□ 2.15
COPS7B-215ENST00000450501 MROH1Q8NDA8 1641 aa28.5■■■□□ 2.15
COPS7B-215ENST00000450501 ZC3H13Q5T200 1668 aaKnown RBP28.48■■■□□ 2.15
COPS7B-215ENST00000450501 SETD1BQ9UPS6 1966 aaKnown RBP28.48■■■□□ 2.15
COPS7B-215ENST00000450501 DEPDC5O75140 1603 aa28.48■■■□□ 2.15
COPS7B-215ENST00000450501 PRDM15P57071 1507 aaPredicted RBP28.47■■■□□ 2.15
COPS7B-215ENST00000450501 ABCC3O15438 1527 aa28.44■■■□□ 2.14
COPS7B-215ENST00000450501 KANK1Q14678 1352 aa28.43■■■□□ 2.14
COPS7B-215ENST00000450501 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.42■■■□□ 2.14
COPS7B-215ENST00000450501 NPATQ14207 1427 aa28.42■■■□□ 2.14
COPS7B-215ENST00000450501 PREX1Q8TCU6 1659 aa28.42■■■□□ 2.14
COPS7B-215ENST00000450501 CEP152O94986 1710 aa28.41■■■□□ 2.14
COPS7B-215ENST00000450501 PZPP20742 1482 aa28.38■■■□□ 2.13
COPS7B-215ENST00000450501 LMTK3Q96Q04 1460 aa28.37■■■□□ 2.13
COPS7B-215ENST00000450501 VWDEQ8N2E2 1590 aa28.36■■■□□ 2.13
COPS7B-215ENST00000450501 CAMSAP1Q5T5Y3 1602 aa28.36■■■□□ 2.13
COPS7B-215ENST00000450501 UHRF1BP1Q6BDS2 1440 aa28.35■■■□□ 2.13
COPS7B-215ENST00000450501 GCC2Q8IWJ2 1684 aa28.34■■■□□ 2.13
COPS7B-215ENST00000450501 UNC13BO14795 1591 aa28.33■■■□□ 2.13
COPS7B-215ENST00000450501 NAIPQ13075 1403 aa28.32■■■□□ 2.12
COPS7B-215ENST00000450501 HFM1A2PYH4 1435 aa28.31■■■□□ 2.12
COPS7B-215ENST00000450501 LMTK2Q8IWU2 1503 aa28.31■■■□□ 2.12
COPS7B-215ENST00000450501 FBXO31Q5XUX0 539 aaPredicted RBP28.29■■■□□ 2.12
COPS7B-215ENST00000450501 ARHGAP31Q2M1Z3 1444 aa28.28■■■□□ 2.12
COPS7B-215ENST00000450501 CFAP65Q6ZU64 1925 aaKnown RBP28.26■■■□□ 2.11
COPS7B-215ENST00000450501 MYO3AQ8NEV4 1616 aa28.26■■■□□ 2.11
COPS7B-215ENST00000450501 FOXD1Q16676 465 aa28.26■■■□□ 2.11
COPS7B-215ENST00000450501 TNRQ92752 1358 aa28.25■■■□□ 2.11
COPS7B-215ENST00000450501 SPATA31D1Q6ZQQ2 1576 aa28.24■■■□□ 2.11
COPS7B-215ENST00000450501 HSPA2P54652 639 aa28.23■■■□□ 2.11
COPS7B-215ENST00000450501 EFCAB6Q5THR3 1501 aa28.23■■■□□ 2.11
COPS7B-215ENST00000450501 TET3O43151 1660 aa28.23■■■□□ 2.11
COPS7B-215ENST00000450501 ERVK-7P63135 1459 aa28.22■■■□□ 2.11
COPS7B-215ENST00000450501 IQGAP3Q86VI3 1631 aa28.22■■■□□ 2.11
COPS7B-215ENST00000450501 ZNF142P52746 1687 aaPredicted RBP28.22■■■□□ 2.11
COPS7B-215ENST00000450501 NUP155O75694 1391 aa28.22■■■□□ 2.11
COPS7B-215ENST00000450501 CEP170BQ9Y4F5 1589 aaPredicted RBP28.19■■■□□ 2.1
COPS7B-215ENST00000450501 A2ML1A8K2U0 1454 aa28.17■■■□□ 2.1
COPS7B-215ENST00000450501 NLRP1Q9C000 1473 aa28.17■■■□□ 2.1
COPS7B-215ENST00000450501 RPRD2Q5VT52 1461 aaKnown RBP28.16■■■□□ 2.1
COPS7B-215ENST00000450501 E9PCH4 1651 aa28.1■■■□□ 2.09
COPS7B-215ENST00000450501 TRIM52Q96A61 297 aa28.09■■■□□ 2.09
COPS7B-215ENST00000450501 NOS1P29475 1434 aa28.09■■■□□ 2.09
COPS7B-215ENST00000450501 SETD5Q9C0A6 1442 aa28.08■■■□□ 2.09
COPS7B-215ENST00000450501 UGGT1Q9NYU2 1555 aa28.07■■■□□ 2.08
COPS7B-215ENST00000450501 SYNMO15061 1565 aa28.05■■■□□ 2.08
COPS7B-215ENST00000450501 ACIN1Q9UKV3 1341 aaKnown RBP28.05■■■□□ 2.08
COPS7B-215ENST00000450501 STRCQ7RTU9 1775 aa28.04■■■□□ 2.08
COPS7B-215ENST00000450501 PLA2R1Q13018 1463 aa28.03■■■□□ 2.08
COPS7B-215ENST00000450501 THEMISQ8N1K5 641 aaPredicted RBP28.03■■■□□ 2.08
COPS7B-215ENST00000450501 SLC52A1Q9NWF4 448 aa28.01■■■□□ 2.07
COPS7B-215ENST00000450501 UBR1Q8IWV7 1749 aa28■■■□□ 2.07
COPS7B-215ENST00000450501 PIK3C2BO00750 1634 aa27.99■■■□□ 2.07
COPS7B-215ENST00000450501 IDI1Q13907 227 aa27.98■■■□□ 2.07
COPS7B-215ENST00000450501 DMRT2Q9Y5R5 561 aa27.98■■■□□ 2.07
COPS7B-215ENST00000450501 SLC4A1APQ9BWU0 796 aaKnown RBP27.97■■■□□ 2.07
COPS7B-215ENST00000450501 RAB3GAP2Q9H2M9 1393 aa27.97■■■□□ 2.07
COPS7B-215ENST00000450501 KDM5AP29375 1690 aaKnown RBP27.97■■■□□ 2.07
COPS7B-215ENST00000450501 PKD2Q13563 968 aa27.96■■■□□ 2.07
COPS7B-215ENST00000450501 STAG3Q9UJ98 1225 aa27.95■■■□□ 2.06
COPS7B-215ENST00000450501 SPHKAPQ2M3C7 1700 aa27.95■■■□□ 2.06
COPS7B-215ENST00000450501 POLR1AO95602 1720 aaPredicted RBP27.92■■■□□ 2.06
COPS7B-215ENST00000450501 NCKAP5LQ9HCH0 1330 aa27.92■■■□□ 2.06
COPS7B-215ENST00000450501 ADGRB3O60242 1522 aa27.91■■■□□ 2.06
COPS7B-215ENST00000450501 PTPRTO14522 1441 aa27.91■■■□□ 2.06
COPS7B-215ENST00000450501 ANKLE2Q86XL3 938 aa27.9■■■□□ 2.06
COPS7B-215ENST00000450501 HRCP23327 699 aa27.88■■■□□ 2.05
COPS7B-215ENST00000450501 MPHOSPH9Q99550 1183 aa27.88■■■□□ 2.05
COPS7B-215ENST00000450501 SLIT1O75093 1534 aa27.87■■■□□ 2.05
COPS7B-215ENST00000450501 ARHGAP23Q9P227 1491 aa27.85■■■□□ 2.05
COPS7B-215ENST00000450501 TRPM2O94759 1503 aa27.85■■■□□ 2.05
COPS7B-215ENST00000450501 TMEM131LA2VDJ0 1609 aa27.84■■■□□ 2.05
COPS7B-215ENST00000450501 MYO5BQ9ULV0 1848 aa27.83■■■□□ 2.05
COPS7B-215ENST00000450501 NEURL4Q96JN8 1562 aa27.83■■■□□ 2.05
COPS7B-215ENST00000450501 TMEM2Q9UHN6 1383 aa27.83■■■□□ 2.05
COPS7B-215ENST00000450501 CHGAP10645 457 aaKnown RBP27.81■■■□□ 2.04
COPS7B-215ENST00000450501 EID1Q9Y6B2 187 aa27.81■■■□□ 2.04
COPS7B-215ENST00000450501 SCAF11Q99590 1463 aaKnown RBP27.81■■■□□ 2.04
COPS7B-215ENST00000450501 TRIM26Q12899 539 aaPredicted RBP27.8■■■□□ 2.04
COPS7B-215ENST00000450501 CLTCL1P53675 1640 aa27.79■■■□□ 2.04
COPS7B-215ENST00000450501 MED14O60244 1454 aa27.79■■■□□ 2.04
COPS7B-215ENST00000450501 TXNDC2Q86VQ3 553 aa27.79■■■□□ 2.04
COPS7B-215ENST00000450501 NPHP4O75161 1426 aaPredicted RBP27.77■■■□□ 2.04
COPS7B-215ENST00000450501 IQGAP1P46940 1657 aa27.76■■■□□ 2.03
COPS7B-215ENST00000450501 LTKP29376 864 aa27.76■■■□□ 2.03
COPS7B-215ENST00000450501 KIF1BO60333 1816 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms