RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 DHX29Q7Z478 1369 aaKnown RBP15.41■□□□□ 0.06
SPTLC3-204ENST00000450297 NPM3O75607 178 aaKnown RBP15.41■□□□□ 0.06
SPTLC3-204ENST00000450297 WASHC2CQ9Y4E1 1318 aa15.41■□□□□ 0.06
SPTLC3-204ENST00000450297 PLA2R1Q13018 1463 aa15.4■□□□□ 0.06
SPTLC3-204ENST00000450297 FBXO31Q5XUX0 539 aaPredicted RBP15.4■□□□□ 0.06
SPTLC3-204ENST00000450297 SPATA31D1Q6ZQQ2 1576 aa15.4■□□□□ 0.06
SPTLC3-204ENST00000450297 CEP170BQ9Y4F5 1589 aaPredicted RBP15.4■□□□□ 0.06
SPTLC3-204ENST00000450297 MYO3AQ8NEV4 1616 aa15.39■□□□□ 0.05
SPTLC3-204ENST00000450297 EHBP1L1Q8N3D4 1523 aa15.39■□□□□ 0.05
SPTLC3-204ENST00000450297 TIAM1Q13009 1591 aa15.39■□□□□ 0.05
SPTLC3-204ENST00000450297 MBD5Q9P267 1494 aa15.39■□□□□ 0.05
SPTLC3-204ENST00000450297 TNRQ92752 1358 aa15.38■□□□□ 0.05
SPTLC3-204ENST00000450297 RTEL1-TNFRSF6BF6WH68 1400 aa15.38■□□□□ 0.05
SPTLC3-204ENST00000450297 CEP162Q5TB80 1403 aa15.38■□□□□ 0.05
SPTLC3-204ENST00000450297 TSPY4P0CV99 314 aa15.38■□□□□ 0.05
SPTLC3-204ENST00000450297 TSPY10P0CW01 314 aa15.38■□□□□ 0.05
SPTLC3-204ENST00000450297 PIP4K2BP78356 416 aa15.37■□□□□ 0.05
SPTLC3-204ENST00000450297 RSPH4AQ5TD94 716 aa15.37■□□□□ 0.05
SPTLC3-204ENST00000450297 A2ML1A8K2U0 1454 aa15.37■□□□□ 0.05
SPTLC3-204ENST00000450297 TCOF1Q13428 1488 aaKnown RBP15.37■□□□□ 0.05
SPTLC3-204ENST00000450297 ADGBQ8N7X0 1667 aa15.37■□□□□ 0.05
SPTLC3-204ENST00000450297 ANKLE2Q86XL3 938 aa15.35■□□□□ 0.05
SPTLC3-204ENST00000450297 CCDC141Q6ZP82 1450 aa15.34■□□□□ 0.05
SPTLC3-204ENST00000450297 NCOA2Q15596 1464 aa15.33■□□□□ 0.05
SPTLC3-204ENST00000450297 ZNF142P52746 1687 aaPredicted RBP15.33■□□□□ 0.04
SPTLC3-204ENST00000450297 TOM1O60784 492 aa15.33■□□□□ 0.04
SPTLC3-204ENST00000450297 THEMISQ8N1K5 641 aaPredicted RBP15.33■□□□□ 0.04
SPTLC3-204ENST00000450297 CAMSAP2Q08AD1 1489 aa15.33■□□□□ 0.04
SPTLC3-204ENST00000450297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.31■□□□□ 0.04
SPTLC3-204ENST00000450297 KDM5DQ9BY66 1539 aa15.31■□□□□ 0.04
SPTLC3-204ENST00000450297 PZPP20742 1482 aa15.3■□□□□ 0.04
SPTLC3-204ENST00000450297 DNMT1P26358 1616 aaKnown RBP15.3■□□□□ 0.04
SPTLC3-204ENST00000450297 HSPA1LP34931 641 aa15.3■□□□□ 0.04
SPTLC3-204ENST00000450297 MIA2Q96PC5 1412 aa15.29■□□□□ 0.04
SPTLC3-204ENST00000450297 SHANK2Q9UPX8 1470 aa15.27■□□□□ 0.04
SPTLC3-204ENST00000450297 KCNA4P22459 653 aa15.27■□□□□ 0.04
SPTLC3-204ENST00000450297 FAM135AQ9P2D6 1515 aa15.27■□□□□ 0.03
SPTLC3-204ENST00000450297 NPHP4O75161 1426 aaPredicted RBP15.26■□□□□ 0.03
SPTLC3-204ENST00000450297 CPS1P31327 1500 aa15.25■□□□□ 0.03
SPTLC3-204ENST00000450297 NLRP1Q9C000 1473 aa15.25■□□□□ 0.03
SPTLC3-204ENST00000450297 LOC105371045A0A1W2PR82 267 aa15.24■□□□□ 0.03
SPTLC3-204ENST00000450297 UGGT1Q9NYU2 1555 aa15.24■□□□□ 0.03
SPTLC3-204ENST00000450297 NEURL4Q96JN8 1562 aa15.22■□□□□ 0.03
SPTLC3-204ENST00000450297 ARHGEF5Q12774 1597 aa15.21■□□□□ 0.03
SPTLC3-204ENST00000450297 KANK4Q5T7N3 995 aaPredicted RBP15.21■□□□□ 0.03
SPTLC3-204ENST00000450297 LRRC9Q6ZRR7 1453 aa15.2■□□□□ 0.02
SPTLC3-204ENST00000450297 VPS8Q8N3P4 1428 aa15.2■□□□□ 0.02
SPTLC3-204ENST00000450297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.023e-7■□□□□ 10.6
SPTLC3-204ENST00000450297 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
SPTLC3-204ENST00000450297 POLR1AO95602 1720 aaPredicted RBP15.19■□□□□ 0.02
SPTLC3-204ENST00000450297 APLP2Q06481 763 aa15.18■□□□□ 0.02
SPTLC3-204ENST00000450297 ABCC3O15438 1527 aa15.17■□□□□ 0.02
SPTLC3-204ENST00000450297 TXNDC2Q86VQ3 553 aa15.17■□□□□ 0.02
SPTLC3-204ENST00000450297 RRP7BPQ9NSQ0 103 aa15.17■□□□□ 0.02
SPTLC3-204ENST00000450297 STAG3Q9UJ98 1225 aa15.17■□□□□ 0.02
SPTLC3-204ENST00000450297 VWDEQ8N2E2 1590 aa15.16■□□□□ 0.02
SPTLC3-204ENST00000450297 MED14O60244 1454 aa15.16■□□□□ 0.02
SPTLC3-204ENST00000450297 MYOM3Q5VTT5 1437 aa15.16■□□□□ 0.02
SPTLC3-204ENST00000450297 ERVK-7P63135 1459 aa15.15■□□□□ 0.02
SPTLC3-204ENST00000450297 EID1Q9Y6B2 187 aa15.15■□□□□ 0.02
SPTLC3-204ENST00000450297 MED1Q15648 1581 aaPredicted RBP15.14■□□□□ 0.01
SPTLC3-204ENST00000450297 DEPDC5O75140 1603 aa15.14■□□□□ 0.01
SPTLC3-204ENST00000450297 KIF15Q9NS87 1388 aa15.13■□□□□ 0.01
SPTLC3-204ENST00000450297 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
SPTLC3-204ENST00000450297 RNF17Q9BXT8 1623 aaKnown RBP15.13■□□□□ 0.01
SPTLC3-204ENST00000450297 MAST1Q9Y2H9 1570 aa15.12■□□□□ 0.01
SPTLC3-204ENST00000450297 IQGAP1P46940 1657 aa15.12■□□□□ 0.01
SPTLC3-204ENST00000450297 DUOX2Q9NRD8 1548 aa15.12■□□□□ 0.01
SPTLC3-204ENST00000450297 LTKP29376 864 aa15.11■□□□□ 0.01
SPTLC3-204ENST00000450297 SCAF11Q99590 1463 aaKnown RBP15.11■□□□□ 0.01
SPTLC3-204ENST00000450297 LRRC7Q96NW7 1537 aa15.11■□□□□ 0.01
SPTLC3-204ENST00000450297 KANK1Q14678 1352 aa15.11■□□□□ 0.01
SPTLC3-204ENST00000450297 ZC3H13Q5T200 1668 aaKnown RBP15.1■□□□□ 0.01
SPTLC3-204ENST00000450297 CHIC2Q9UKJ5 165 aa15.1■□□□□ 0.01
SPTLC3-204ENST00000450297 EIF2AK4Q9P2K8 1649 aaKnown RBP15.1■□□□□ 0.01
SPTLC3-204ENST00000450297 BCANQ96GW7 911 aa15.09■□□□□ 0.01
SPTLC3-204ENST00000450297 MAP3K1Q13233 1512 aa15.08■□□□□ 0.01
SPTLC3-204ENST00000450297 ABCC5O15440 1437 aa15.08■□□□□ 0
SPTLC3-204ENST00000450297 MROH1Q8NDA8 1641 aa15.06■□□□□ 0
SPTLC3-204ENST00000450297 ERBINQ96RT1 1412 aa15.06■□□□□ 0
SPTLC3-204ENST00000450297 CEP152O94986 1710 aa15.06■□□□□ 0
SPTLC3-204ENST00000450297 ARHGAP31Q2M1Z3 1444 aa15.05■□□□□ -0
SPTLC3-204ENST00000450297 ALKQ9UM73 1620 aa15.04■□□□□ -0
SPTLC3-204ENST00000450297 ANKRD30AQ9BXX3 1397 aa15.04■□□□□ -0
SPTLC3-204ENST00000450297 TMEM2Q9UHN6 1383 aa15.04■□□□□ -0
SPTLC3-204ENST00000450297 SLC26A8Q96RN1 970 aa15.04■□□□□ -0
SPTLC3-204ENST00000450297 SYNMO15061 1565 aa15.03■□□□□ -0
SPTLC3-204ENST00000450297 DAPK1P53355 1430 aa15.03■□□□□ -0
SPTLC3-204ENST00000450297 IDI1Q13907 227 aa15.03■□□□□ -0
SPTLC3-204ENST00000450297 PROSER2Q86WR7 435 aaPredicted RBP15.03■□□□□ -0
SPTLC3-204ENST00000450297 UBR1Q8IWV7 1749 aa15.03■□□□□ -0
SPTLC3-204ENST00000450297 RBM33Q96EV2 1170 aaKnown RBP15.02■□□□□ -0
SPTLC3-204ENST00000450297 SLIT1O75093 1534 aa15.02□□□□□ -0.01
SPTLC3-204ENST00000450297 CFAP65Q6ZU64 1925 aaKnown RBP15.02□□□□□ -0.01
SPTLC3-204ENST00000450297 ARHGAP23Q9P227 1491 aa15.01□□□□□ -0.01
SPTLC3-204ENST00000450297 STRCP1A6NGW2 1772 aa15.01□□□□□ -0.01
SPTLC3-204ENST00000450297 FAM50AQ14320 339 aaKnown RBP15.01□□□□□ -0.01
SPTLC3-204ENST00000450297 PTPN23Q9H3S7 1636 aa15.01□□□□□ -0.01
SPTLC3-204ENST00000450297 PRDM15P57071 1507 aaPredicted RBP15.01□□□□□ -0.01
SPTLC3-204ENST00000450297 TMEM94Q12767 1356 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms