RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 RIMS1Q86UR5 1692 aaKnown RBP19.91■□□□□ 0.78
SNRNP27-203ENST00000450162 ERBINQ96RT1 1412 aa19.9■□□□□ 0.78
SNRNP27-203ENST00000450162 FAM135AQ9P2D6 1515 aa19.89■□□□□ 0.77
SNRNP27-203ENST00000450162 ROCK1Q13464 1354 aa19.88■□□□□ 0.77
SNRNP27-203ENST00000450162 EIF2AK4Q9P2K8 1649 aaKnown RBP19.87■□□□□ 0.77
SNRNP27-203ENST00000450162 ZMYM3Q14202 1370 aa19.85■□□□□ 0.77
SNRNP27-203ENST00000450162 WASHC2CQ9Y4E1 1318 aa19.85■□□□□ 0.77
SNRNP27-203ENST00000450162 PTPRKQ15262 1439 aa19.84■□□□□ 0.77
SNRNP27-203ENST00000450162 CEBPAP49715 358 aaPredicted RBP19.83■□□□□ 0.77
SNRNP27-203ENST00000450162 MROH2AA6NES4 1674 aa19.82■□□□□ 0.76
SNRNP27-203ENST00000450162 RNF17Q9BXT8 1623 aaKnown RBP19.81■□□□□ 0.76
SNRNP27-203ENST00000450162 ITGAEP38570 1179 aa19.81■□□□□ 0.76
SNRNP27-203ENST00000450162 ANKRD50Q9ULJ7 1429 aa19.81■□□□□ 0.76
SNRNP27-203ENST00000450162 KDM5DQ9BY66 1539 aa19.8■□□□□ 0.76
SNRNP27-203ENST00000450162 NPATQ14207 1427 aa19.79■□□□□ 0.76
SNRNP27-203ENST00000450162 SETD1BQ9UPS6 1966 aaKnown RBP19.78■□□□□ 0.76
SNRNP27-203ENST00000450162 KANK1Q14678 1352 aa19.78■□□□□ 0.76
SNRNP27-203ENST00000450162 ADRA2BP18089 450 aa19.77■□□□□ 0.76
SNRNP27-203ENST00000450162 C3P01024 1663 aa19.76■□□□□ 0.75
SNRNP27-203ENST00000450162 CLTCQ00610 1675 aaKnown RBP19.76■□□□□ 0.75
SNRNP27-203ENST00000450162 PRDM15P57071 1507 aaPredicted RBP19.74■□□□□ 0.75
SNRNP27-203ENST00000450162 ZC3H13Q5T200 1668 aaKnown RBP19.73■□□□□ 0.75
SNRNP27-203ENST00000450162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.73■□□□□ 0.75
SNRNP27-203ENST00000450162 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
SNRNP27-203ENST00000450162 ABCC3O15438 1527 aa19.72■□□□□ 0.75
SNRNP27-203ENST00000450162 UHRF1BP1Q6BDS2 1440 aa19.72■□□□□ 0.75
SNRNP27-203ENST00000450162 DEPDC5O75140 1603 aa19.72■□□□□ 0.75
SNRNP27-203ENST00000450162 PZPP20742 1482 aa19.72■□□□□ 0.75
SNRNP27-203ENST00000450162 LMTK3Q96Q04 1460 aa19.7■□□□□ 0.74
SNRNP27-203ENST00000450162 ARHGAP31Q2M1Z3 1444 aa19.69■□□□□ 0.74
SNRNP27-203ENST00000450162 PIAS4Q8N2W9 510 aaPredicted RBP19.68■□□□□ 0.74
SNRNP27-203ENST00000450162 PREX1Q8TCU6 1659 aa19.68■□□□□ 0.74
SNRNP27-203ENST00000450162 LMTK2Q8IWU2 1503 aa19.67■□□□□ 0.74
SNRNP27-203ENST00000450162 VWDEQ8N2E2 1590 aa19.66■□□□□ 0.74
SNRNP27-203ENST00000450162 FBXO31Q5XUX0 539 aaPredicted RBP19.66■□□□□ 0.74
SNRNP27-203ENST00000450162 HFM1A2PYH4 1435 aa19.66■□□□□ 0.74
SNRNP27-203ENST00000450162 TNRQ92752 1358 aa19.65■□□□□ 0.74
SNRNP27-203ENST00000450162 NAIPQ13075 1403 aa19.65■□□□□ 0.74
SNRNP27-203ENST00000450162 ACIN1Q9UKV3 1341 aaKnown RBP19.63■□□□□ 0.73
SNRNP27-203ENST00000450162 CAMSAP1Q5T5Y3 1602 aa19.62■□□□□ 0.73
SNRNP27-203ENST00000450162 UNC13BO14795 1591 aa19.61■□□□□ 0.73
SNRNP27-203ENST00000450162 NUP155O75694 1391 aa19.61■□□□□ 0.73
SNRNP27-203ENST00000450162 CEP152O94986 1710 aa19.6■□□□□ 0.73
SNRNP27-203ENST00000450162 HSPA2P54652 639 aa19.6■□□□□ 0.73
SNRNP27-203ENST00000450162 NLRP1Q9C000 1473 aa19.6■□□□□ 0.73
SNRNP27-203ENST00000450162 SPATA31D1Q6ZQQ2 1576 aa19.59■□□□□ 0.73
SNRNP27-203ENST00000450162 ERVK-7P63135 1459 aa19.59■□□□□ 0.73
SNRNP27-203ENST00000450162 RPRD2Q5VT52 1461 aaKnown RBP19.59■□□□□ 0.73
SNRNP27-203ENST00000450162 GCC2Q8IWJ2 1684 aa19.57■□□□□ 0.72
SNRNP27-203ENST00000450162 A2ML1A8K2U0 1454 aa19.57■□□□□ 0.72
SNRNP27-203ENST00000450162 EFCAB6Q5THR3 1501 aa19.56■□□□□ 0.72
SNRNP27-203ENST00000450162 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
SNRNP27-203ENST00000450162 MYO3AQ8NEV4 1616 aa19.55■□□□□ 0.72
SNRNP27-203ENST00000450162 THEMISQ8N1K5 641 aaPredicted RBP19.55■□□□□ 0.72
SNRNP27-203ENST00000450162 IQGAP3Q86VI3 1631 aa19.54■□□□□ 0.72
SNRNP27-203ENST00000450162 CEP170BQ9Y4F5 1589 aaPredicted RBP19.54■□□□□ 0.72
SNRNP27-203ENST00000450162 TET3O43151 1660 aa19.54■□□□□ 0.72
SNRNP27-203ENST00000450162 ZNF142P52746 1687 aaPredicted RBP19.54■□□□□ 0.72
SNRNP27-203ENST00000450162 SLC52A1Q9NWF4 448 aa19.53■□□□□ 0.72
SNRNP27-203ENST00000450162 NOS1P29475 1434 aa19.52■□□□□ 0.72
SNRNP27-203ENST00000450162 MSH5O43196 834 aa19.51■□□□□ 0.71
SNRNP27-203ENST00000450162 PKD2Q13563 968 aa19.51■□□□□ 0.71
SNRNP27-203ENST00000450162 TRIM52Q96A61 297 aa19.51■□□□□ 0.71
SNRNP27-203ENST00000450162 PLA2R1Q13018 1463 aa19.51■□□□□ 0.71
SNRNP27-203ENST00000450162 SETD5Q9C0A6 1442 aa19.5■□□□□ 0.71
SNRNP27-203ENST00000450162 UGGT1Q9NYU2 1555 aa19.49■□□□□ 0.71
SNRNP27-203ENST00000450162 HRCP23327 699 aa19.47■□□□□ 0.71
SNRNP27-203ENST00000450162 IDI1Q13907 227 aa19.47■□□□□ 0.71
SNRNP27-203ENST00000450162 CFAP65Q6ZU64 1925 aaKnown RBP19.47■□□□□ 0.71
SNRNP27-203ENST00000450162 ANKLE2Q86XL3 938 aa19.45■□□□□ 0.7
SNRNP27-203ENST00000450162 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
SNRNP27-203ENST00000450162 STAG3Q9UJ98 1225 aa19.45■□□□□ 0.7
SNRNP27-203ENST00000450162 PTPRTO14522 1441 aa19.43■□□□□ 0.7
SNRNP27-203ENST00000450162 E9PCH4 1651 aa19.43■□□□□ 0.7
SNRNP27-203ENST00000450162 SYNMO15061 1565 aa19.41■□□□□ 0.7
SNRNP27-203ENST00000450162 STRCQ7RTU9 1775 aa19.41■□□□□ 0.7
SNRNP27-203ENST00000450162 KDM5AP29375 1690 aaKnown RBP19.4■□□□□ 0.7
SNRNP27-203ENST00000450162 NCKAP5LQ9HCH0 1330 aa19.4■□□□□ 0.7
SNRNP27-203ENST00000450162 RAB3GAP2Q9H2M9 1393 aa19.4■□□□□ 0.7
SNRNP27-203ENST00000450162 HDGFP51858 240 aaKnown RBP19.38■□□□□ 0.69
SNRNP27-203ENST00000450162 MPHOSPH9Q99550 1183 aa19.38■□□□□ 0.69
SNRNP27-203ENST00000450162 EID1Q9Y6B2 187 aa19.38■□□□□ 0.69
SNRNP27-203ENST00000450162 UBR1Q8IWV7 1749 aa19.37■□□□□ 0.69
SNRNP27-203ENST00000450162 PIK3C2BO00750 1634 aa19.36■□□□□ 0.69
SNRNP27-203ENST00000450162 SLIT1O75093 1534 aa19.36■□□□□ 0.69
SNRNP27-203ENST00000450162 TMEM2Q9UHN6 1383 aa19.36■□□□□ 0.69
SNRNP27-203ENST00000450162 ARHGAP23Q9P227 1491 aa19.35■□□□□ 0.69
SNRNP27-203ENST00000450162 MED14O60244 1454 aa19.35■□□□□ 0.69
SNRNP27-203ENST00000450162 TXNDC2Q86VQ3 553 aa19.34■□□□□ 0.69
SNRNP27-203ENST00000450162 ADGRB3O60242 1522 aa19.34■□□□□ 0.69
SNRNP27-203ENST00000450162 SPHKAPQ2M3C7 1700 aa19.31■□□□□ 0.68
SNRNP27-203ENST00000450162 TRPM2O94759 1503 aa19.31■□□□□ 0.68
SNRNP27-203ENST00000450162 SCAF11Q99590 1463 aaKnown RBP19.31■□□□□ 0.68
SNRNP27-203ENST00000450162 TRIM26Q12899 539 aaPredicted RBP19.31■□□□□ 0.68
SNRNP27-203ENST00000450162 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.31■□□□□ 0.68
SNRNP27-203ENST00000450162 NPHP4O75161 1426 aaPredicted RBP19.31■□□□□ 0.68
SNRNP27-203ENST00000450162 CHGAP10645 457 aaKnown RBP19.3■□□□□ 0.68
SNRNP27-203ENST00000450162 LTKP29376 864 aa19.3■□□□□ 0.68
SNRNP27-203ENST00000450162 POLR1AO95602 1720 aaPredicted RBP19.29■□□□□ 0.68
SNRNP27-203ENST00000450162 TMEM131LA2VDJ0 1609 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms