RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 EHBP1L1Q8N3D4 1523 aa27.67■■■□□ 2.02
FAM3A-216ENST00000449971 DNMT1P26358 1616 aaKnown RBP27.67■■■□□ 2.02
FAM3A-216ENST00000449971 TNRQ92752 1358 aa27.67■■■□□ 2.02
FAM3A-216ENST00000449971 TIAM1Q13009 1591 aa27.66■■■□□ 2.02
FAM3A-216ENST00000449971 MBD5Q9P267 1494 aa27.64■■■□□ 2.02
FAM3A-216ENST00000449971 DHX29Q7Z478 1369 aaKnown RBP27.64■■■□□ 2.02
FAM3A-216ENST00000449971 TOM1O60784 492 aa27.64■■■□□ 2.02
FAM3A-216ENST00000449971 SENP3Q9H4L4 574 aaPredicted RBP27.62■■■□□ 2.01
FAM3A-216ENST00000449971 WASHC2CQ9Y4E1 1318 aa27.61■■■□□ 2.01
FAM3A-216ENST00000449971 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.6■■■□□ 2.01
FAM3A-216ENST00000449971 RTEL1-TNFRSF6BF6WH68 1400 aa27.59■■■□□ 2.01
FAM3A-216ENST00000449971 SHANK2Q9UPX8 1470 aa27.58■■■□□ 2.01
FAM3A-216ENST00000449971 ANKLE2Q86XL3 938 aa27.58■■■□□ 2.01
FAM3A-216ENST00000449971 NEURL4Q96JN8 1562 aa27.57■■■□□ 2
FAM3A-216ENST00000449971 POLR1AO95602 1720 aaPredicted RBP27.57■■■□□ 2
FAM3A-216ENST00000449971 NCOA2Q15596 1464 aa27.56■■■□□ 2
FAM3A-216ENST00000449971 CPS1P31327 1500 aa27.56■■■□□ 2
FAM3A-216ENST00000449971 MED1Q15648 1581 aaPredicted RBP27.56■■■□□ 2
FAM3A-216ENST00000449971 KANK4Q5T7N3 995 aaPredicted RBP27.55■■■□□ 2
FAM3A-216ENST00000449971 PZPP20742 1482 aa27.55■■■□□ 2
FAM3A-216ENST00000449971 KDM5DQ9BY66 1539 aa27.55■■■□□ 2
FAM3A-216ENST00000449971 APLP2Q06481 763 aa27.54■■■□□ 2
FAM3A-216ENST00000449971 CCDC141Q6ZP82 1450 aa27.53■■■□□ 2
FAM3A-216ENST00000449971 LRRC9Q6ZRR7 1453 aa27.53■■■□□ 2
FAM3A-216ENST00000449971 THEMISQ8N1K5 641 aaPredicted RBP27.53■■■□□ 2
FAM3A-216ENST00000449971 PHF23Q9BUL5 403 aaPredicted RBP27.52■■■□□ 2
FAM3A-216ENST00000449971 CAMSAP2Q08AD1 1489 aa27.51■■□□□ 1.99
FAM3A-216ENST00000449971 MIA2Q96PC5 1412 aa27.5■■□□□ 1.99
FAM3A-216ENST00000449971 MAP3K1Q13233 1512 aa27.49■■□□□ 1.99
FAM3A-216ENST00000449971 NPHP4O75161 1426 aaPredicted RBP27.49■■□□□ 1.99
FAM3A-216ENST00000449971 UGGT1Q9NYU2 1555 aa27.48■■□□□ 1.99
FAM3A-216ENST00000449971 FAM135AQ9P2D6 1515 aa27.47■■□□□ 1.99
FAM3A-216ENST00000449971 VWDEQ8N2E2 1590 aa27.46■■□□□ 1.99
FAM3A-216ENST00000449971 TSPY4P0CV99 314 aa27.45■■□□□ 1.98
FAM3A-216ENST00000449971 TSPY10P0CW01 314 aa27.45■■□□□ 1.98
FAM3A-216ENST00000449971 NLRP1Q9C000 1473 aa27.44■■□□□ 1.98
FAM3A-216ENST00000449971 RSPH4AQ5TD94 716 aa27.43■■□□□ 1.98
FAM3A-216ENST00000449971 MED14O60244 1454 aa27.37■■□□□ 1.97
FAM3A-216ENST00000449971 IQGAP1P46940 1657 aa27.36■■□□□ 1.97
FAM3A-216ENST00000449971 DEPDC5O75140 1603 aa27.36■■□□□ 1.97
FAM3A-216ENST00000449971 ALKQ9UM73 1620 aa27.35■■□□□ 1.97
FAM3A-216ENST00000449971 ABCC3O15438 1527 aa27.31■■□□□ 1.96
FAM3A-216ENST00000449971 LRRC7Q96NW7 1537 aa27.31■■□□□ 1.96
FAM3A-216ENST00000449971 ARHGEF5Q12774 1597 aa27.31■■□□□ 1.96
FAM3A-216ENST00000449971 MYOM3Q5VTT5 1437 aa27.31■■□□□ 1.96
FAM3A-216ENST00000449971 STRCP1A6NGW2 1772 aa27.3■■□□□ 1.96
FAM3A-216ENST00000449971 CFAP65Q6ZU64 1925 aaKnown RBP27.29■■□□□ 1.96
FAM3A-216ENST00000449971 ERVK-7P63135 1459 aa27.29■■□□□ 1.96
FAM3A-216ENST00000449971 RNF17Q9BXT8 1623 aaKnown RBP27.26■■□□□ 1.95
FAM3A-216ENST00000449971 TXNDC2Q86VQ3 553 aa27.23■■□□□ 1.95
FAM3A-216ENST00000449971 ZC3H13Q5T200 1668 aaKnown RBP27.22■■□□□ 1.95
FAM3A-216ENST00000449971 CEP152O94986 1710 aa27.21■■□□□ 1.95
FAM3A-216ENST00000449971 SCAF11Q99590 1463 aaKnown RBP27.21■■□□□ 1.95
FAM3A-216ENST00000449971 LTKP29376 864 aa27.21■■□□□ 1.95
FAM3A-216ENST00000449971 SYNMO15061 1565 aa27.21■■□□□ 1.95
FAM3A-216ENST00000449971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.18■■□□□ 1.94
FAM3A-216ENST00000449971 MAST1Q9Y2H9 1570 aa27.18■■□□□ 1.94
FAM3A-216ENST00000449971 MROH1Q8NDA8 1641 aa27.17■■□□□ 1.94
FAM3A-216ENST00000449971 UBR1Q8IWV7 1749 aa27.17■■□□□ 1.94
FAM3A-216ENST00000449971 EID1Q9Y6B2 187 aa27.16■■□□□ 1.94
FAM3A-216ENST00000449971 EIF2AK4Q9P2K8 1649 aaKnown RBP27.16■■□□□ 1.94
FAM3A-216ENST00000449971 STAG3Q9UJ98 1225 aa27.15■■□□□ 1.94
FAM3A-216ENST00000449971 RRP7BPQ9NSQ0 103 aa27.13■■□□□ 1.93
FAM3A-216ENST00000449971 RGS17Q9UGC6 210 aaPredicted RBP27.13■■□□□ 1.93
FAM3A-216ENST00000449971 FGD6Q6ZV73 1430 aa27.12■■□□□ 1.93
FAM3A-216ENST00000449971 DUOX2Q9NRD8 1548 aa27.11■■□□□ 1.93
FAM3A-216ENST00000449971 KIF15Q9NS87 1388 aa27.1■■□□□ 1.93
FAM3A-216ENST00000449971 RBM33Q96EV2 1170 aaKnown RBP27.09■■□□□ 1.93
FAM3A-216ENST00000449971 PTPN23Q9H3S7 1636 aa27.08■■□□□ 1.93
FAM3A-216ENST00000449971 ARHGAP23Q9P227 1491 aa27.07■■□□□ 1.92
FAM3A-216ENST00000449971 SLIT1O75093 1534 aa27.07■■□□□ 1.92
FAM3A-216ENST00000449971 ABCC5O15440 1437 aa27.07■■□□□ 1.92
FAM3A-216ENST00000449971 FAM50AQ14320 339 aaKnown RBP27.04■■□□□ 1.92
FAM3A-216ENST00000449971 XIRP1Q702N8 1843 aaKnown RBP27.04■■□□□ 1.92
FAM3A-216ENST00000449971 TMEM94Q12767 1356 aa27.03■■□□□ 1.92
FAM3A-216ENST00000449971 SLC26A8Q96RN1 970 aa27.03■■□□□ 1.92
FAM3A-216ENST00000449971 TMEM2Q9UHN6 1383 aa27.03■■□□□ 1.92
FAM3A-216ENST00000449971 PIK3C2BO00750 1634 aa27.02■■□□□ 1.92
FAM3A-216ENST00000449971 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
FAM3A-216ENST00000449971 CHIC2Q9UKJ5 165 aa27.02■■□□□ 1.92
FAM3A-216ENST00000449971 DAPK1P53355 1430 aa27.01■■□□□ 1.91
FAM3A-216ENST00000449971 ARHGAP31Q2M1Z3 1444 aa27.01■■□□□ 1.91
FAM3A-216ENST00000449971 PROSER2Q86WR7 435 aaPredicted RBP27.01■■□□□ 1.91
FAM3A-216ENST00000449971 BCANQ96GW7 911 aa27.01■■□□□ 1.91
FAM3A-216ENST00000449971 PRDM15P57071 1507 aaPredicted RBP27■■□□□ 1.91
FAM3A-216ENST00000449971 KANK1Q14678 1352 aa27■■□□□ 1.91
FAM3A-216ENST00000449971 POTEAQ6S8J7 498 aa26.99■■□□□ 1.91
FAM3A-216ENST00000449971 FAM135BQ49AJ0 1406 aa26.99■■□□□ 1.91
FAM3A-216ENST00000449971 ERBINQ96RT1 1412 aa26.99■■□□□ 1.91
FAM3A-216ENST00000449971 IDI1Q13907 227 aa26.98■■□□□ 1.91
FAM3A-216ENST00000449971 KCNA6P17658 529 aa26.96■■□□□ 1.91
FAM3A-216ENST00000449971 EFCAB6Q5THR3 1501 aa26.95■■□□□ 1.9
FAM3A-216ENST00000449971 ANKRD30AQ9BXX3 1397 aa26.93■■□□□ 1.9
FAM3A-216ENST00000449971 ROBO1Q9Y6N7 1651 aa26.92■■□□□ 1.9
FAM3A-216ENST00000449971 CROCC2H7BZ55 1655 aa26.91■■□□□ 1.9
FAM3A-216ENST00000449971 MSH6P52701 1360 aa26.85■■□□□ 1.89
FAM3A-216ENST00000449971 TET3O43151 1660 aa26.83■■□□□ 1.89
FAM3A-216ENST00000449971 PPP1R15AO75807 674 aaPredicted RBP26.82■■□□□ 1.88
FAM3A-216ENST00000449971 SLAIN2Q9P270 581 aa26.82■■□□□ 1.88
FAM3A-216ENST00000449971 ADGRB3O60242 1522 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms