RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 DUOX2Q9NRD8 1548 aa23.93■■□□□ 1.42
TOP3B-211ENST00000449704 WASHC2CQ9Y4E1 1318 aa23.9■■□□□ 1.42
TOP3B-211ENST00000449704 ZMYM3Q14202 1370 aa23.9■■□□□ 1.42
TOP3B-211ENST00000449704 ADGRL2O95490 1459 aa23.88■■□□□ 1.41
TOP3B-211ENST00000449704 ERBINQ96RT1 1412 aa23.87■■□□□ 1.41
TOP3B-211ENST00000449704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.413e-6■■■□□ 14.6
TOP3B-211ENST00000449704 ROCK1Q13464 1354 aa23.84■■□□□ 1.41
TOP3B-211ENST00000449704 ANKRD50Q9ULJ7 1429 aa23.82■■□□□ 1.4
TOP3B-211ENST00000449704 EIF2AK4Q9P2K8 1649 aaKnown RBP23.8■■□□□ 1.4
TOP3B-211ENST00000449704 CLTCQ00610 1675 aaKnown RBP23.79■■□□□ 1.4
TOP3B-211ENST00000449704 KDM5DQ9BY66 1539 aa23.79■■□□□ 1.4
TOP3B-211ENST00000449704 RNF17Q9BXT8 1623 aaKnown RBP23.77■■□□□ 1.4
TOP3B-211ENST00000449704 FBXO41Q8TF61 875 aa23.77■■□□□ 1.4
TOP3B-211ENST00000449704 KANK1Q14678 1352 aa23.77■■□□□ 1.4
TOP3B-211ENST00000449704 C3P01024 1663 aa23.76■■□□□ 1.39
TOP3B-211ENST00000449704 FBXO31Q5XUX0 539 aaPredicted RBP23.75■■□□□ 1.39
TOP3B-211ENST00000449704 FAM135AQ9P2D6 1515 aa23.74■■□□□ 1.39
TOP3B-211ENST00000449704 MROH2AA6NES4 1674 aa23.74■■□□□ 1.39
TOP3B-211ENST00000449704 HSPA2P54652 639 aa23.74■■□□□ 1.39
TOP3B-211ENST00000449704 NPATQ14207 1427 aa23.73■■□□□ 1.39
TOP3B-211ENST00000449704 LMTK3Q96Q04 1460 aa23.73■■□□□ 1.39
TOP3B-211ENST00000449704 ABCC3O15438 1527 aa23.73■■□□□ 1.39
TOP3B-211ENST00000449704 UHRF1BP1Q6BDS2 1440 aa23.72■■□□□ 1.39
TOP3B-211ENST00000449704 MROH1Q8NDA8 1641 aa23.72■■□□□ 1.39
TOP3B-211ENST00000449704 PRDM15P57071 1507 aaPredicted RBP23.69■■□□□ 1.38
TOP3B-211ENST00000449704 PZPP20742 1482 aa23.68■■□□□ 1.38
TOP3B-211ENST00000449704 TNRQ92752 1358 aa23.66■■□□□ 1.38
TOP3B-211ENST00000449704 SETD1BQ9UPS6 1966 aaKnown RBP23.65■■□□□ 1.38
TOP3B-211ENST00000449704 DEPDC5O75140 1603 aa23.64■■□□□ 1.38
TOP3B-211ENST00000449704 NAIPQ13075 1403 aa23.64■■□□□ 1.37
TOP3B-211ENST00000449704 ZC3H13Q5T200 1668 aaKnown RBP23.63■■□□□ 1.37
TOP3B-211ENST00000449704 PREX1Q8TCU6 1659 aa23.62■■□□□ 1.37
TOP3B-211ENST00000449704 NUP155O75694 1391 aa23.62■■□□□ 1.37
TOP3B-211ENST00000449704 HFM1A2PYH4 1435 aa23.6■■□□□ 1.37
TOP3B-211ENST00000449704 ARHGAP31Q2M1Z3 1444 aa23.6■■□□□ 1.37
TOP3B-211ENST00000449704 CEP152O94986 1710 aa23.6■■□□□ 1.37
TOP3B-211ENST00000449704 VWDEQ8N2E2 1590 aa23.6■■□□□ 1.37
TOP3B-211ENST00000449704 LMTK2Q8IWU2 1503 aa23.59■■□□□ 1.37
TOP3B-211ENST00000449704 CAMSAP1Q5T5Y3 1602 aa23.58■■□□□ 1.36
TOP3B-211ENST00000449704 ERVK-7P63135 1459 aa23.57■■□□□ 1.36
TOP3B-211ENST00000449704 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
TOP3B-211ENST00000449704 UNC13BO14795 1591 aa23.54■■□□□ 1.36
TOP3B-211ENST00000449704 A2ML1A8K2U0 1454 aa23.53■■□□□ 1.36
TOP3B-211ENST00000449704 MYO3AQ8NEV4 1616 aa23.52■■□□□ 1.36
TOP3B-211ENST00000449704 SPATA31D1Q6ZQQ2 1576 aa23.52■■□□□ 1.36
TOP3B-211ENST00000449704 NLRP1Q9C000 1473 aa23.51■■□□□ 1.35
TOP3B-211ENST00000449704 EFCAB6Q5THR3 1501 aa23.5■■□□□ 1.35
TOP3B-211ENST00000449704 CEP170BQ9Y4F5 1589 aaPredicted RBP23.5■■□□□ 1.35
TOP3B-211ENST00000449704 THEMISQ8N1K5 641 aaPredicted RBP23.49■■□□□ 1.35
TOP3B-211ENST00000449704 GCC2Q8IWJ2 1684 aa23.48■■□□□ 1.35
TOP3B-211ENST00000449704 CFAP65Q6ZU64 1925 aaKnown RBP23.47■■□□□ 1.35
TOP3B-211ENST00000449704 IDI1Q13907 227 aa23.46■■□□□ 1.35
TOP3B-211ENST00000449704 RPRD2Q5VT52 1461 aaKnown RBP23.46■■□□□ 1.35
TOP3B-211ENST00000449704 NCKAP5LQ9HCH0 1330 aa23.46■■□□□ 1.35
TOP3B-211ENST00000449704 STAG3Q9UJ98 1225 aa23.46■■□□□ 1.35
TOP3B-211ENST00000449704 IQGAP3Q86VI3 1631 aa23.45■■□□□ 1.34
TOP3B-211ENST00000449704 DMRT2Q9Y5R5 561 aa23.45■■□□□ 1.34
TOP3B-211ENST00000449704 TET3O43151 1660 aa23.44■■□□□ 1.34
TOP3B-211ENST00000449704 NOS1P29475 1434 aa23.44■■□□□ 1.34
TOP3B-211ENST00000449704 SETD5Q9C0A6 1442 aa23.44■■□□□ 1.34
TOP3B-211ENST00000449704 SLC4A1APQ9BWU0 796 aaKnown RBP23.43■■□□□ 1.34
TOP3B-211ENST00000449704 SLC52A1Q9NWF4 448 aa23.43■■□□□ 1.34
TOP3B-211ENST00000449704 ZNF142P52746 1687 aaPredicted RBP23.43■■□□□ 1.34
TOP3B-211ENST00000449704 UGGT1Q9NYU2 1555 aa23.43■■□□□ 1.34
TOP3B-211ENST00000449704 PKD2Q13563 968 aa23.42■■□□□ 1.34
TOP3B-211ENST00000449704 ANKLE2Q86XL3 938 aa23.4■■□□□ 1.34
TOP3B-211ENST00000449704 PLA2R1Q13018 1463 aa23.39■■□□□ 1.34
TOP3B-211ENST00000449704 SYNMO15061 1565 aa23.37■■□□□ 1.33
TOP3B-211ENST00000449704 RAB3GAP2Q9H2M9 1393 aa23.37■■□□□ 1.33
TOP3B-211ENST00000449704 CHGAP10645 457 aaKnown RBP23.36■■□□□ 1.33
TOP3B-211ENST00000449704 E9PCH4 1651 aa23.35■■□□□ 1.33
TOP3B-211ENST00000449704 STRCQ7RTU9 1775 aa23.35■■□□□ 1.33
TOP3B-211ENST00000449704 ACIN1Q9UKV3 1341 aaKnown RBP23.34■■□□□ 1.33
TOP3B-211ENST00000449704 MPHOSPH9Q99550 1183 aa23.34■■□□□ 1.33
TOP3B-211ENST00000449704 PTPRTO14522 1441 aa23.33■■□□□ 1.33
TOP3B-211ENST00000449704 FOXD1Q16676 465 aa23.32■■□□□ 1.32
TOP3B-211ENST00000449704 TXNDC2Q86VQ3 553 aa23.32■■□□□ 1.32
TOP3B-211ENST00000449704 EID1Q9Y6B2 187 aa23.31■■□□□ 1.32
TOP3B-211ENST00000449704 PIK3C2BO00750 1634 aa23.3■■□□□ 1.32
TOP3B-211ENST00000449704 TMEM2Q9UHN6 1383 aa23.29■■□□□ 1.32
TOP3B-211ENST00000449704 LTKP29376 864 aa23.29■■□□□ 1.32
TOP3B-211ENST00000449704 UBR1Q8IWV7 1749 aa23.28■■□□□ 1.32
TOP3B-211ENST00000449704 ADGRB3O60242 1522 aa23.25■■□□□ 1.31
TOP3B-211ENST00000449704 HRCP23327 699 aa23.25■■□□□ 1.31
TOP3B-211ENST00000449704 NPHP4O75161 1426 aaPredicted RBP23.25■■□□□ 1.31
TOP3B-211ENST00000449704 ARHGAP23Q9P227 1491 aa23.24■■□□□ 1.31
TOP3B-211ENST00000449704 SCAF11Q99590 1463 aaKnown RBP23.24■■□□□ 1.31
TOP3B-211ENST00000449704 SLIT1O75093 1534 aa23.23■■□□□ 1.31
TOP3B-211ENST00000449704 CERKQ8TCT0 537 aa23.23■■□□□ 1.31
TOP3B-211ENST00000449704 HDGFP51858 240 aaKnown RBP23.22■■□□□ 1.31
TOP3B-211ENST00000449704 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
TOP3B-211ENST00000449704 PPP1R15AO75807 674 aaPredicted RBP23.21■■□□□ 1.31
TOP3B-211ENST00000449704 ZNF326Q5BKZ1 582 aaKnown RBP23.21■■□□□ 1.31
TOP3B-211ENST00000449704 NEURL4Q96JN8 1562 aa23.2■■□□□ 1.3
TOP3B-211ENST00000449704 MED14O60244 1454 aa23.19■■□□□ 1.3
TOP3B-211ENST00000449704 RIMS2Q9UQ26 1411 aa23.19■■□□□ 1.3
TOP3B-211ENST00000449704 ZNF335Q9H4Z2 1342 aaPredicted RBP23.19■■□□□ 1.3
TOP3B-211ENST00000449704 NUTM2DQ5VT03 806 aaPredicted RBP23.19■■□□□ 1.3
TOP3B-211ENST00000449704 BCANQ96GW7 911 aa23.19■■□□□ 1.3
TOP3B-211ENST00000449704 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms