RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 SIGLEC1Q9BZZ2 1709 aa21.57■■□□□ 1.04
APP-210ENST00000448850 KDM5DQ9BY66 1539 aa21.55■■□□□ 1.04
APP-210ENST00000448850 KIF3BO15066 747 aa21.55■■□□□ 1.04
APP-210ENST00000448850 AGLP35573 1532 aa21.54■■□□□ 1.04
APP-210ENST00000448850 DHX57Q6P158 1386 aaKnown RBP21.54■■□□□ 1.04
APP-210ENST00000448850 IQGAP3Q86VI3 1631 aa21.54■■□□□ 1.04
APP-210ENST00000448850 MROH1Q8NDA8 1641 aa21.54■■□□□ 1.04
APP-210ENST00000448850 NUP155O75694 1391 aa21.52■■□□□ 1.04
APP-210ENST00000448850 PRDM15P57071 1507 aaPredicted RBP21.52■■□□□ 1.04
APP-210ENST00000448850 PZPP20742 1482 aa21.51■■□□□ 1.03
APP-210ENST00000448850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.5■■□□□ 1.033e-8■■□□□ 13.3
APP-210ENST00000448850 CCER1Q8TC90 406 aaPredicted RBP21.49■■□□□ 1.03
APP-210ENST00000448850 FAM135AQ9P2D6 1515 aa21.49■■□□□ 1.03
APP-210ENST00000448850 VWDEQ8N2E2 1590 aa21.49■■□□□ 1.03
APP-210ENST00000448850 CEP152O94986 1710 aa21.48■■□□□ 1.03
APP-210ENST00000448850 MPHOSPH9Q99550 1183 aa21.48■■□□□ 1.03
APP-210ENST00000448850 KANK1Q14678 1352 aa21.46■■□□□ 1.03
APP-210ENST00000448850 GGT6Q6P531 493 aa21.45■■□□□ 1.03
APP-210ENST00000448850 SLC4A1APQ9BWU0 796 aaKnown RBP21.45■■□□□ 1.03
APP-210ENST00000448850 TET3O43151 1660 aa21.44■■□□□ 1.02
APP-210ENST00000448850 ZC3H13Q5T200 1668 aaKnown RBP21.44■■□□□ 1.02
APP-210ENST00000448850 E9PCH4 1651 aa21.4■■□□□ 1.02
APP-210ENST00000448850 ARID4BQ4LE39 1312 aaPredicted RBP21.4■■□□□ 1.02
APP-210ENST00000448850 LMTK2Q8IWU2 1503 aa21.4■■□□□ 1.02
APP-210ENST00000448850 ABCC3O15438 1527 aa21.39■■□□□ 1.01
APP-210ENST00000448850 CFAP65Q6ZU64 1925 aaKnown RBP21.39■■□□□ 1.01
APP-210ENST00000448850 PKD2Q13563 968 aa21.38■■□□□ 1.01
APP-210ENST00000448850 CAMSAP1Q5T5Y3 1602 aa21.38■■□□□ 1.01
APP-210ENST00000448850 CLSPNQ9HAW4 1339 aa21.37■■□□□ 1.01
APP-210ENST00000448850 CLTCQ00610 1675 aaKnown RBP21.37■■□□□ 1.01
APP-210ENST00000448850 WASHC2CQ9Y4E1 1318 aa21.36■■□□□ 1.01
APP-210ENST00000448850 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
APP-210ENST00000448850 EFCAB6Q5THR3 1501 aa21.36■■□□□ 1.01
APP-210ENST00000448850 MLECQ14165 292 aa21.36■■□□□ 1.01
APP-210ENST00000448850 FOXD1Q16676 465 aa21.35■■□□□ 1.01
APP-210ENST00000448850 FER1L4A9Z1Z3 1794 aa21.32■■□□□ 1
APP-210ENST00000448850 SPHKAPQ2M3C7 1700 aa21.32■■□□□ 1
APP-210ENST00000448850 ANKRD30BQ9BXX2 1392 aa21.29■■□□□ 1
APP-210ENST00000448850 MROH2AA6NES4 1674 aa21.29■■□□□ 1
APP-210ENST00000448850 RPRD2Q5VT52 1461 aaKnown RBP21.28■■□□□ 1
APP-210ENST00000448850 ARHGAP31Q2M1Z3 1444 aa21.27■■□□□ 1
APP-210ENST00000448850 ESF1Q9H501 851 aaKnown RBP21.27■□□□□ 0.99
APP-210ENST00000448850 NPATQ14207 1427 aa21.27■□□□□ 0.99
APP-210ENST00000448850 CNTLNQ9NXG0 1405 aa21.25■□□□□ 0.99
APP-210ENST00000448850 ADAMTSL3P82987 1691 aa21.25■□□□□ 0.99
APP-210ENST00000448850 PREX1Q8TCU6 1659 aa21.25■□□□□ 0.99
APP-210ENST00000448850 PLA2R1Q13018 1463 aa21.23■□□□□ 0.99
APP-210ENST00000448850 SIN3AQ96ST3 1273 aa21.23■□□□□ 0.99
APP-210ENST00000448850 PTPRTO14522 1441 aa21.23■□□□□ 0.99
APP-210ENST00000448850 MADDQ8WXG6 1647 aa21.22■□□□□ 0.99
APP-210ENST00000448850 TRPM2O94759 1503 aa21.22■□□□□ 0.99
APP-210ENST00000448850 C3P01024 1663 aa21.2■□□□□ 0.98
APP-210ENST00000448850 RIMS1Q86UR5 1692 aaKnown RBP21.2■□□□□ 0.98
APP-210ENST00000448850 ZMYM3Q14202 1370 aa21.19■□□□□ 0.98
APP-210ENST00000448850 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
APP-210ENST00000448850 CLTCL1P53675 1640 aa21.18■□□□□ 0.98
APP-210ENST00000448850 KIF1BO60333 1816 aa21.17■□□□□ 0.98
APP-210ENST00000448850 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
APP-210ENST00000448850 NOS1P29475 1434 aa21.17■□□□□ 0.98
APP-210ENST00000448850 SYNMO15061 1565 aa21.16■□□□□ 0.98
APP-210ENST00000448850 ZEB1P37275 1124 aaPredicted RBP21.16■□□□□ 0.98
APP-210ENST00000448850 ERVK-7P63135 1459 aa21.15■□□□□ 0.98
APP-210ENST00000448850 SPATA31D1Q6ZQQ2 1576 aa21.15■□□□□ 0.98
APP-210ENST00000448850 PIK3C2BO00750 1634 aa21.14■□□□□ 0.97
APP-210ENST00000448850 UGGT1Q9NYU2 1555 aa21.13■□□□□ 0.97
APP-210ENST00000448850 FBXO31Q5XUX0 539 aaPredicted RBP21.13■□□□□ 0.97
APP-210ENST00000448850 TIMELESSQ9UNS1 1208 aa21.09■□□□□ 0.97
APP-210ENST00000448850 TONSLQ96HA7 1378 aa21.09■□□□□ 0.97
APP-210ENST00000448850 MYO5BQ9ULV0 1848 aa21.08■□□□□ 0.96
APP-210ENST00000448850 CEBPAP49715 358 aaPredicted RBP21.07■□□□□ 0.96
APP-210ENST00000448850 SETD1BQ9UPS6 1966 aaKnown RBP21.06■□□□□ 0.96
APP-210ENST00000448850 SLC52A1Q9NWF4 448 aa21.06■□□□□ 0.96
APP-210ENST00000448850 NEURL4Q96JN8 1562 aa21.06■□□□□ 0.96
APP-210ENST00000448850 SPATA31E1Q6ZUB1 1445 aa21.03■□□□□ 0.96
APP-210ENST00000448850 TNRQ92752 1358 aa21.03■□□□□ 0.96
APP-210ENST00000448850 IDI1Q13907 227 aa21.02■□□□□ 0.96
APP-210ENST00000448850 ADGRB3O60242 1522 aa21.02■□□□□ 0.95
APP-210ENST00000448850 PTPRMP28827 1452 aa21.02■□□□□ 0.95
APP-210ENST00000448850 PLPPR3Q6T4P5 718 aa21.01■□□□□ 0.95
APP-210ENST00000448850 TMEM131LA2VDJ0 1609 aa21.01■□□□□ 0.95
APP-210ENST00000448850 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
APP-210ENST00000448850 IFT172Q9UG01 1749 aa20.99■□□□□ 0.95
APP-210ENST00000448850 KDM5AP29375 1690 aaKnown RBP20.99■□□□□ 0.95
APP-210ENST00000448850 RGL3Q3MIN7 710 aa20.99■□□□□ 0.95
APP-210ENST00000448850 MYO3AQ8NEV4 1616 aa20.98■□□□□ 0.95
APP-210ENST00000448850 CHGAP10645 457 aaKnown RBP20.97■□□□□ 0.95
APP-210ENST00000448850 PPLO60437 1756 aa20.97■□□□□ 0.95
APP-210ENST00000448850 NLRP1Q9C000 1473 aa20.97■□□□□ 0.95
APP-210ENST00000448850 UBR1Q8IWV7 1749 aa20.97■□□□□ 0.95
APP-210ENST00000448850 KDM4FA0A1W2PPD8 638 aa20.95■□□□□ 0.94
APP-210ENST00000448850 PPP1R15AO75807 674 aaPredicted RBP20.95■□□□□ 0.94
APP-210ENST00000448850 DCAF11Q8TEB1 546 aa20.92■□□□□ 0.94
APP-210ENST00000448850 ZNF326Q5BKZ1 582 aaKnown RBP20.92■□□□□ 0.94
APP-210ENST00000448850 STAG3Q9UJ98 1225 aa20.92■□□□□ 0.94
APP-210ENST00000448850 ZNF142P52746 1687 aaPredicted RBP20.92■□□□□ 0.94
APP-210ENST00000448850 A2ML1A8K2U0 1454 aa20.91■□□□□ 0.94
APP-210ENST00000448850 NEXMIFQ5QGS0 1516 aa20.89■□□□□ 0.94
APP-210ENST00000448850 CEP170BQ9Y4F5 1589 aaPredicted RBP20.89■□□□□ 0.93
APP-210ENST00000448850 KDM2AQ9Y2K7 1162 aa20.89■□□□□ 0.93
APP-210ENST00000448850 RPGRIP1LQ68CZ1 1315 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms