RNA–Protein interactions for RNA: ENST00000448437.6

STRC-204, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 2,518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-204ENST00000448437 FRAT1Q92837 279 aaPredicted RBP16.75■□□□□ 0.27
STRC-204ENST00000448437 KDM2AQ9Y2K7 1162 aa16.74■□□□□ 0.27
STRC-204ENST00000448437 KTN1Q86UP2 1357 aaKnown RBP16.73■□□□□ 0.27
STRC-204ENST00000448437 NLRP13Q86W25 1043 aa16.73■□□□□ 0.27
STRC-204ENST00000448437 RALGAPBQ86X10 1494 aa16.72■□□□□ 0.27
STRC-204ENST00000448437 TARBP1Q13395 1621 aaKnown RBP16.71■□□□□ 0.27
STRC-204ENST00000448437 ZNF608Q9ULD9 1512 aaPredicted RBP16.7■□□□□ 0.26
STRC-204ENST00000448437 IQGAP2Q13576 1575 aa16.69■□□□□ 0.26
STRC-204ENST00000448437 ZNF777Q9ULD5 760 aaPredicted RBP16.69■□□□□ 0.26
STRC-204ENST00000448437 UHRF1BP1Q6BDS2 1440 aa16.68■□□□□ 0.26
STRC-204ENST00000448437 C20orf194Q5TEA3 1177 aa16.67■□□□□ 0.26
STRC-204ENST00000448437 PDIA4P13667 645 aaKnown RBP16.66■□□□□ 0.26
STRC-204ENST00000448437 DCAF11Q8TEB1 546 aa16.66■□□□□ 0.26
STRC-204ENST00000448437 CFDP1Q9UEE9 299 aaPredicted RBP16.66■□□□□ 0.26
STRC-204ENST00000448437 IFT140Q96RY7 1462 aa16.66■□□□□ 0.26
STRC-204ENST00000448437 PARD3Q8TEW0 1356 aa16.65■□□□□ 0.26
STRC-204ENST00000448437 CAMSAP2Q08AD1 1489 aa16.65■□□□□ 0.26
STRC-204ENST00000448437 CC2D1BQ5T0F9 858 aaKnown RBP16.64■□□□□ 0.25
STRC-204ENST00000448437 E9PCH4 1651 aa16.64■□□□□ 0.25
STRC-204ENST00000448437 FRAT2O75474 233 aaPredicted RBP16.64■□□□□ 0.25
STRC-204ENST00000448437 PDE4CQ08493 712 aa16.64■□□□□ 0.25
STRC-204ENST00000448437 KDM2BQ8NHM5 1336 aa16.62■□□□□ 0.25
STRC-204ENST00000448437 FAM161AQ3B820 660 aa16.62■□□□□ 0.25
STRC-204ENST00000448437 NUP155O75694 1391 aa16.61■□□□□ 0.25
STRC-204ENST00000448437 ADGBQ8N7X0 1667 aa16.61■□□□□ 0.25
STRC-204ENST00000448437 KIAA0586Q9BVV6 1533 aa16.61■□□□□ 0.25
STRC-204ENST00000448437 CENPQQ7L2Z9 268 aaPredicted RBP16.61■□□□□ 0.25
STRC-204ENST00000448437 C8orf34Q49A92 452 aa16.6■□□□□ 0.25
STRC-204ENST00000448437 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
STRC-204ENST00000448437 ANKRD30AQ9BXX3 1397 aa16.6■□□□□ 0.25
STRC-204ENST00000448437 ARHGEF12Q9NZN5 1544 aa16.6■□□□□ 0.25
STRC-204ENST00000448437 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
STRC-204ENST00000448437 NUP153P49790 1475 aaKnown RBP16.59■□□□□ 0.25
STRC-204ENST00000448437 RGS3P49796 1198 aa16.59■□□□□ 0.25
STRC-204ENST00000448437 BLMP54132 1417 aaPredicted RBP16.58■□□□□ 0.24
STRC-204ENST00000448437 PRG4Q92954 1404 aaPredicted RBP16.58■□□□□ 0.24
STRC-204ENST00000448437 PER1O15534 1290 aaPredicted RBP16.57■□□□□ 0.24
STRC-204ENST00000448437 ADGRL2O95490 1459 aa16.56■□□□□ 0.24
STRC-204ENST00000448437 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
STRC-204ENST00000448437 FAM43AQ8N2R8 423 aa16.54■□□□□ 0.24
STRC-204ENST00000448437 ZMYM4Q5VZL5 1548 aa16.54■□□□□ 0.24
STRC-204ENST00000448437 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
STRC-204ENST00000448437 ARXQ96QS3 562 aa16.53■□□□□ 0.24
STRC-204ENST00000448437 GPATCH8Q9UKJ3 1502 aaKnown RBP16.53■□□□□ 0.24
STRC-204ENST00000448437 TROQ12816 1431 aaPredicted RBP16.52■□□□□ 0.24
STRC-204ENST00000448437 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.24
STRC-204ENST00000448437 PANK3Q9H999 370 aa16.52■□□□□ 0.24
STRC-204ENST00000448437 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.24
STRC-204ENST00000448437 PLEKHH2Q8IVE3 1493 aa16.52■□□□□ 0.24
STRC-204ENST00000448437 CROCC2H7BZ55 1655 aa16.52■□□□□ 0.24
STRC-204ENST00000448437 RAPGEF6Q8TEU7 1601 aa16.52■□□□□ 0.23
STRC-204ENST00000448437 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
STRC-204ENST00000448437 ITSN2Q9NZM3 1697 aa16.51■□□□□ 0.23
STRC-204ENST00000448437 NBPF1Q3BBV0 1214 aa16.51■□□□□ 0.23
STRC-204ENST00000448437 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
STRC-204ENST00000448437 RGL3Q3MIN7 710 aa16.5■□□□□ 0.23
STRC-204ENST00000448437 KIAA0556O60303 1618 aa16.5■□□□□ 0.23
STRC-204ENST00000448437 DUSP27Q5VZP5 1158 aa16.49■□□□□ 0.23
STRC-204ENST00000448437 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.49■□□□□ 0.23
STRC-204ENST00000448437 INSRP06213 1382 aa16.49■□□□□ 0.23
STRC-204ENST00000448437 DISP3Q9P2K9 1392 aa16.49■□□□□ 0.23
STRC-204ENST00000448437 DISP1Q96F81 1524 aa16.49■□□□□ 0.23
STRC-204ENST00000448437 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
STRC-204ENST00000448437 PLEKHH1Q9ULM0 1364 aa16.48■□□□□ 0.23
STRC-204ENST00000448437 BCL11BQ9C0K0 894 aaPredicted RBP16.48■□□□□ 0.23
STRC-204ENST00000448437 POGKQ9P215 609 aa16.47■□□□□ 0.23
STRC-204ENST00000448437 WDR43Q15061 677 aaKnown RBP eCLIP16.47■□□□□ 0.23
STRC-204ENST00000448437 COL17A1Q9UMD9 1497 aaPredicted RBP16.46■□□□□ 0.23
STRC-204ENST00000448437 C9orf84Q5VXU9 1444 aa16.46■□□□□ 0.23
STRC-204ENST00000448437 PRAG1Q86YV5 1406 aa16.46■□□□□ 0.23
STRC-204ENST00000448437 FGD1P98174 961 aa16.46■□□□□ 0.22
STRC-204ENST00000448437 KDM5DQ9BY66 1539 aa16.46■□□□□ 0.22
STRC-204ENST00000448437 GOLGA2Q08379 1002 aa16.45■□□□□ 0.22
STRC-204ENST00000448437 TRPM1Q7Z4N2 1603 aa16.45■□□□□ 0.22
STRC-204ENST00000448437 A0A0U1RQG5 324 aaPredicted RBP16.44■□□□□ 0.22
STRC-204ENST00000448437 FBLN2P98095 1184 aa16.44■□□□□ 0.22
STRC-204ENST00000448437 TSPY4P0CV99 314 aa16.44■□□□□ 0.22
STRC-204ENST00000448437 TSPY10P0CW01 314 aa16.44■□□□□ 0.22
STRC-204ENST00000448437 TESK2Q96S53 571 aa16.44■□□□□ 0.22
STRC-204ENST00000448437 SLKQ9H2G2 1235 aaPredicted RBP16.43■□□□□ 0.22
STRC-204ENST00000448437 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
STRC-204ENST00000448437 TMF1P82094 1093 aa16.42■□□□□ 0.22
STRC-204ENST00000448437 CCDC144AA2RUR9 1427 aa16.41■□□□□ 0.22
STRC-204ENST00000448437 ERBINQ96RT1 1412 aa16.41■□□□□ 0.22
STRC-204ENST00000448437 PLB1Q6P1J6 1458 aa16.41■□□□□ 0.22
STRC-204ENST00000448437 RRAGDQ9NQL2 400 aaPredicted RBP16.4■□□□□ 0.22
STRC-204ENST00000448437 USP19O94966 1318 aa16.39■□□□□ 0.21
STRC-204ENST00000448437 SEC24BO95487 1268 aa16.39■□□□□ 0.21
STRC-204ENST00000448437 PPP2R1AP30153 589 aa16.39■□□□□ 0.21
STRC-204ENST00000448437 BECN1Q14457 450 aa16.39■□□□□ 0.21
STRC-204ENST00000448437 ZNF521Q96K83 1311 aa16.39■□□□□ 0.21
STRC-204ENST00000448437 BCAR3O75815 825 aa16.39■□□□□ 0.21
STRC-204ENST00000448437 CCDC146Q8IYE0 955 aa16.39■□□□□ 0.21
STRC-204ENST00000448437 IGHDP01880 384 aa16.38■□□□□ 0.21
STRC-204ENST00000448437 SLFN5Q08AF3 891 aa16.38■□□□□ 0.21
STRC-204ENST00000448437 PTPRGP23470 1445 aa16.38■□□□□ 0.21
STRC-204ENST00000448437 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
STRC-204ENST00000448437 SHANK2Q9UPX8 1470 aa16.38■□□□□ 0.21
STRC-204ENST00000448437 HNRNPMP52272 730 aaKnown RBP eCLIP16.38■□□□□ 0.21
STRC-204ENST00000448437 KNSTRNQ9Y448 316 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms